| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66044544
Identifier: 66044544
GI number: 66044544
Start: 1464224
End: 1465102
Strand: Reverse
Name: 66044544
Synonym: Psyr_1296
Alternate gene names: NA
Gene position: 1465102-1464224 (Counterclockwise)
Preceding gene: 66044548
Following gene: 66044542
Centisome position: 24.04
GC content: 59.04
Gene sequence:
>879_bases ATGCCCCTTCCTGCCTCGCACTGCACAACGGCTCGATTGATGCTCGCCCTGTCGCTGGCTGCCACGTCGTGCGTCAGCCA GGCCAGGGAGACGCTGACCTGGCTGATGCGCGACATCCCCCCTTCGACGATTTTTTCCGGTGCCATGCGCGGGCAAGGTG CAATTGATCAGCTCATGCCATTGCTGACTGCGCAAATGCCCGAATACGATCACGTGCTGATGCGGGTCAACCGCGCCAGG GCTCTGCAAATGCTGAGCGACGAGACGTCTCTCAGTTGTGATCCCACCATGCTGTGGACGGCAGAAAGAGCCAGAACCCT GCTTTTTTCCATACCGATCGGTGCGGTACTGAGCAGCGGTCTGATTGTACGCAAGGAGGAGATGTCGAAGTTCGAGCCCT ACGTAGAAGACGGAAAAATCGACGTGGCGGCGTTGATGGCCAGCCGGAAGATCAAATTGGGCATCGTTGCCGAACGCAGC TATGGAGAAGTGATCGACCACACGTTGCACGACGTCGATGAAGACGTCCTTGTGCCGCACTACGGTAACGATGCCGTCGG CAGCCTGCTGCAAATGGAGCGTCTGGAGCGTCTGCAGGCCTTTATCAGCTTCTGGCCGGAAGCGCGCTATCACGCCATGC AACAAGGCATAAGGCCCGAGGAGCTGGCCTTCTTGCCGATCAAGGGCAACCCTGCATACCAGTTCGTCTATGTCAGTTGC AGCAACTCACCCAAAGGCCAGCAGGCCATTGCGCTGATCAACCGCGAGATGCGCGTGCTGCGCGAAACCAGCCTGATGGG CTTTTATGCGCAGTGGCTGGAACCCGCGCAACGGGCCAGCTACCTGGAGGACGTCAAGGCGCTGCTGGACAAGGAGTGA
Upstream 100 bases:
>100_bases ACCGGGGCACCTGAATGTGACGCCACTGGCGCAGCGCCATTCAAAGAGCTGCCACCCCTACCTCAGACCGTTGAACCTTT TTCGAGGATGACACCCGCGA
Downstream 100 bases:
>100_bases GCGGACAAAAGAAACCCCGGGCAGAGGGGGACCTGCCCGGGGTAAACATGACCATGCTGGTCAGTACGTCAGCCCTTGAT CACCGGAGCACAATGATCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
>292_residues MPLPASHCTTARLMLALSLAATSCVSQARETLTWLMRDIPPSTIFSGAMRGQGAIDQLMPLLTAQMPEYDHVLMRVNRAR ALQMLSDETSLSCDPTMLWTAERARTLLFSIPIGAVLSSGLIVRKEEMSKFEPYVEDGKIDVAALMASRKIKLGIVAERS YGEVIDHTLHDVDEDVLVPHYGNDAVGSLLQMERLERLQAFISFWPEARYHAMQQGIRPEELAFLPIKGNPAYQFVYVSC SNSPKGQQAIALINREMRVLRETSLMGFYAQWLEPAQRASYLEDVKALLDKE
Sequences:
>Translated_292_residues MPLPASHCTTARLMLALSLAATSCVSQARETLTWLMRDIPPSTIFSGAMRGQGAIDQLMPLLTAQMPEYDHVLMRVNRAR ALQMLSDETSLSCDPTMLWTAERARTLLFSIPIGAVLSSGLIVRKEEMSKFEPYVEDGKIDVAALMASRKIKLGIVAERS YGEVIDHTLHDVDEDVLVPHYGNDAVGSLLQMERLERLQAFISFWPEARYHAMQQGIRPEELAFLPIKGNPAYQFVYVSC SNSPKGQQAIALINREMRVLRETSLMGFYAQWLEPAQRASYLEDVKALLDKE >Mature_291_residues PLPASHCTTARLMLALSLAATSCVSQARETLTWLMRDIPPSTIFSGAMRGQGAIDQLMPLLTAQMPEYDHVLMRVNRARA LQMLSDETSLSCDPTMLWTAERARTLLFSIPIGAVLSSGLIVRKEEMSKFEPYVEDGKIDVAALMASRKIKLGIVAERSY GEVIDHTLHDVDEDVLVPHYGNDAVGSLLQMERLERLQAFISFWPEARYHAMQQGIRPEELAFLPIKGNPAYQFVYVSCS NSPKGQQAIALINREMRVLRETSLMGFYAQWLEPAQRASYLEDVKALLDKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32748; Mature: 32617
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLPASHCTTARLMLALSLAATSCVSQARETLTWLMRDIPPSTIFSGAMRGQGAIDQLMP CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHH LLTAQMPEYDHVLMRVNRARALQMLSDETSLSCDPTMLWTAERARTLLFSIPIGAVLSSG HHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHCCCHHHHHHCC LIVRKEEMSKFEPYVEDGKIDVAALMASRKIKLGIVAERSYGEVIDHTLHDVDEDVLVPH CEEEHHHHHHCCCCHHCCCCHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHCCCCCCCCC YGNDAVGSLLQMERLERLQAFISFWPEARYHAMQQGIRPEELAFLPIKGNPAYQFVYVSC CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHEEEEEECCCCCEEEEEEEE SNSPKGQQAIALINREMRVLRETSLMGFYAQWLEPAQRASYLEDVKALLDKE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PLPASHCTTARLMLALSLAATSCVSQARETLTWLMRDIPPSTIFSGAMRGQGAIDQLMP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHH LLTAQMPEYDHVLMRVNRARALQMLSDETSLSCDPTMLWTAERARTLLFSIPIGAVLSSG HHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHCCCHHHHHHCC LIVRKEEMSKFEPYVEDGKIDVAALMASRKIKLGIVAERSYGEVIDHTLHDVDEDVLVPH CEEEHHHHHHCCCCHHCCCCHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHCCCCCCCCC YGNDAVGSLLQMERLERLQAFISFWPEARYHAMQQGIRPEELAFLPIKGNPAYQFVYVSC CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHEEEEEECCCCCEEEEEEEE SNSPKGQQAIALINREMRVLRETSLMGFYAQWLEPAQRASYLEDVKALLDKE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA