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The map label for this gene is rcsB [H]

Identifier: 66044542

GI number: 66044542

Start: 1462804

End: 1463466

Strand: Reverse

Name: rcsB [H]

Synonym: Psyr_1294

Alternate gene names: 66044542

Gene position: 1463466-1462804 (Counterclockwise)

Preceding gene: 66044544

Following gene: 66044528

Centisome position: 24.02

GC content: 61.54

Gene sequence:

>663_bases
TTGAGCGATTCCGCTGATCGCCCGTTGCGGGTCATCGTGGCTGATGACCACCCGATTTTTCTCATCGGCCTGCGGGTCGT
ACTGGAGCAGAACAATCTGGCCAGCGTCGTCGCCGAGGCCTGCAATCCGGACGAACTGCTTCAGGTACTCGAACGCCACG
CCTGCGATGTGCTGGTGACTGACTTCATGATGCCCGTTGAACGGCAGAACGATGGCCTGCGTCTGCTGCAGCGCATCCGC
CGGGACTTTCCGGCGCTGCCGGTGATCGTTGTCACGACCCTGAGCAATGCCGGACTGTTTCAGTCCATGCTTGACCTGGA
TGTCCGGGGTCTGTTGAGCAAGGCCAGCCTTGCCGGAGAACTGCCTGCTGCCATCAAGAGCGTAAGGCGCGGCGAGCTTT
TTGTCGCCGATTCGGTACGCAGCGTCCTGAGCGAAGCCCGTCAGCATGGGCCCGACGCGCTGCTGCCGGCAGATCGCTTG
TCGCCAAGGGAGCTGGAAGTGTTACGCCTGCTCTCGGCCGGCCATACGGTTGGCCAGATCGCGGCGCAACTCAATCGCAG
CAAACAGACCGTCAGCGCCCAGAAAGTCGCCGCCATGCGCAAGCTCGGACTGGCCAATGACGCTGCCCTGTTCATTTATT
TGCAGGAAAGCGGCATGTCCTGA

Upstream 100 bases:

>100_bases
TTCCGCTACGCGTCCTACAAGGTGCCTATGCTCTTGATCACTGCGTTAAACACCTCTATCGCATGCAATACCCGTATAGC
CTTTTTCACGGAGCCACCTC

Downstream 100 bases:

>100_bases
GGCCGGTCGTCCTTCGAAACGGCGTGCAGGTGGCTGCTATCATGCTCAGCCATCCAGCGCATGAACGCCGAGGCAGGCAT
CGGGCGCGCAATGAAATACC

Product: LuxR response regulator receiver

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MSDSADRPLRVIVADDHPIFLIGLRVVLEQNNLASVVAEACNPDELLQVLERHACDVLVTDFMMPVERQNDGLRLLQRIR
RDFPALPVIVVTTLSNAGLFQSMLDLDVRGLLSKASLAGELPAAIKSVRRGELFVADSVRSVLSEARQHGPDALLPADRL
SPRELEVLRLLSAGHTVGQIAAQLNRSKQTVSAQKVAAMRKLGLANDAALFIYLQESGMS

Sequences:

>Translated_220_residues
MSDSADRPLRVIVADDHPIFLIGLRVVLEQNNLASVVAEACNPDELLQVLERHACDVLVTDFMMPVERQNDGLRLLQRIR
RDFPALPVIVVTTLSNAGLFQSMLDLDVRGLLSKASLAGELPAAIKSVRRGELFVADSVRSVLSEARQHGPDALLPADRL
SPRELEVLRLLSAGHTVGQIAAQLNRSKQTVSAQKVAAMRKLGLANDAALFIYLQESGMS
>Mature_219_residues
SDSADRPLRVIVADDHPIFLIGLRVVLEQNNLASVVAEACNPDELLQVLERHACDVLVTDFMMPVERQNDGLRLLQRIRR
DFPALPVIVVTTLSNAGLFQSMLDLDVRGLLSKASLAGELPAAIKSVRRGELFVADSVRSVLSEARQHGPDALLPADRLS
PRELEVLRLLSAGHTVGQIAAQLNRSKQTVSAQKVAAMRKLGLANDAALFIYLQESGMS

Specific function: Also stimulates ftsZ expression. This suggests that rcsB is a regulator implicated in the regulation of more than one cellular function [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788546, Length=212, Percent_Identity=40.5660377358491, Blast_Score=160, Evalue=5e-41,
Organism=Escherichia coli, GI1788222, Length=202, Percent_Identity=27.2277227722772, Blast_Score=82, Evalue=2e-17,
Organism=Escherichia coli, GI1788521, Length=212, Percent_Identity=31.6037735849057, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1790102, Length=202, Percent_Identity=30.1980198019802, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1786747, Length=207, Percent_Identity=24.6376811594203, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI1789937, Length=202, Percent_Identity=25.2475247524752, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 23978; Mature: 23847

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDSADRPLRVIVADDHPIFLIGLRVVLEQNNLASVVAEACNPDELLQVLERHACDVLVT
CCCCCCCCEEEEEECCCCEEEEEHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHH
DFMMPVERQNDGLRLLQRIRRDFPALPVIVVTTLSNAGLFQSMLDLDVRGLLSKASLAGE
HHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCC
LPAAIKSVRRGELFVADSVRSVLSEARQHGPDALLPADRLSPRELEVLRLLSAGHTVGQI
CHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHH
AAQLNRSKQTVSAQKVAAMRKLGLANDAALFIYLQESGMS
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCC
>Mature Secondary Structure 
SDSADRPLRVIVADDHPIFLIGLRVVLEQNNLASVVAEACNPDELLQVLERHACDVLVT
CCCCCCCEEEEEECCCCEEEEEHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHH
DFMMPVERQNDGLRLLQRIRRDFPALPVIVVTTLSNAGLFQSMLDLDVRGLLSKASLAGE
HHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCC
LPAAIKSVRRGELFVADSVRSVLSEARQHGPDALLPADRLSPRELEVLRLLSAGHTVGQI
CHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHH
AAQLNRSKQTVSAQKVAAMRKLGLANDAALFIYLQESGMS
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]