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The map label for this gene is atoS [C]

Identifier: 66044548

GI number: 66044548

Start: 1468991

End: 1471078

Strand: Reverse

Name: atoS [C]

Synonym: Psyr_1300

Alternate gene names: 66044548

Gene position: 1471078-1468991 (Counterclockwise)

Preceding gene: 66044550

Following gene: 66044544

Centisome position: 24.14

GC content: 59.77

Gene sequence:

>2088_bases
GTGATATCGCCCACTGGTTTCCCGACCGCCAACGGCAAGGCCGCCGGGATTATCCGATCCAGGGACTGGAGCCAGACTTC
ACTCGGACCGATCGAGCACTGGCCGGTATCGCTGAAAAACACCCTGAATCTGATCCTCAATTCCCCGGAGTCCATGTACC
TGCTCTGGGGGCCGGATCTGGTGTTTTTCCACAATGACGCCTATACGCCGATTCTCGGCCCGCGCAAGGACAACGCTATC
GGCGCACTCATTCCGGATCTGTGGGCTGACGTCTGGGATCAGGTCGCGCCGCTGGTGATCGATGCGTTTGCCGGCAAGCC
CTGCCGCTACACGGATATGCCGCTGACCATGGCACGCTACGGCGAGGTCGAACAGACATGGTGGTCATTTTCGTTTTCAC
CGGTAATCGACGAATACGGCGTGGTTGTCGGCATGTTCTGCATCACCAACGAAACCACCGCGCATGTCCTCAACCAGCAG
GCGCTGCAGGATAGCGAACGCAAACGCCTGAAACTGATCGATGATCTGGTCAGCCTGGAACGACAGCAGACCGCCAGGCT
GGAGCAACGCACGCTGGAGCTGGACACGTTTTGGGAGATATCTCCGGACCCGCTGGCGATACTCGATTTCAACGGTATCT
TTCTGCGGGTAAACCCGGCCTGGACAGCGCTGCTGGGCCACCCGGAACACGAGCTGCTGGGCACCTCCATCATGACCCTG
CTGCATCCGGATGATGTCAGCGGCACCCAGAATGCTCTGAAACACACCATCAACCATGTGCTGCCGCTGTTTGAAAATCG
TTATCAGCACGTCGACGGCAGCTATCACTGGTTCGGCTGGACCGCGGCACCCGGCAATGGAATCATTTTTGCGCTGGGCA
AACACCTGACCCACGAAAAGGACCGCATCAAGGCACTGCGTATCGCCGAAGAGGCCTTGATTCAATCGCAGAAAATGGAA
GCGGTCGGGCAATTGACCGGCGGTCTGGCTCATGACTTCAACAACCTGCTGATGGGCGTGACCGGCAACATGGAGCTGCT
CCTGTCGAGGATCAGACAGGAACGCTTCACAGAGCTGGACCGCTACATCAACGCCGCACTGGAAGGTTCGCGACGCGCGG
CATCCCTGACACATCGACTGCTGGCATTTTCGCGCCGTCAGACACTGGCGCCCAAGGCTACTGATATCGACCTGCTGGTC
GTGGACATGGACGAGCTGATCCGGCGCACCGTAGGTCCGGCCATCGATATGCAGGTCAATGCCTCACGCGGACTGTGGGC
GACCCTGGTTGACCCGCATCAACTGGAAAATTCACTGCTCAACCTGTGCATCAACGCCAAGGACGCCATGCCCGATGGCG
GAAAGCTGCTGATCCAGACGGGCAACCGTCACCTGACTGCAGTCACGGCGACCCGGTATCAGTTGCCTGCAGGCCGCTAT
GTGGAACTGTCCGTCAGCGACTCCGGCACGGGCATGAGCAACGACGTCATGGCGAGGGCCTTCGACCCGTTCTTCACCAC
CAAACCGACAGGCATGGGCACCGGACTGGGGTTGTCGATGATTTACGGTTTTGCACGGCAGTCAGGTGGCGGCGTCTACA
TCACGTCAAAGGTTGGCGAGGGTTCGAAAGTCAGCATTCTGCTGCCGATGCACGAAGGCGAAGCTGAAACAGTGGCCTTC
GATGACAGCCCGCTGCAAGTGCCCGCCTCCAGCACCGGCGACGAAACCATTCTGGTGGTCGATGACGAGCCCGCCGTGCG
CTTGCTCATTACGGAGTTGCTAGAGGACCTTGGCTATATCGTTTTGCAGGCTGAACGAGGCGCCGATGCGCTGACCATTC
TGCAGTCCAAGGCGGCCATCGACCTGCTGATCACCGACGTCGGTCTGCCGGGCGGCATGAACGGTCGTCAGGTCGCAGAC
GCGGCGCGGGATGTCCGGCCCGACCTGAAAATCCTGTTTGTGACCGGTTATGCTGAAAACGCCGCGTTGGCGCATGACAC
GCTGGAGCCGGGCATGCACGTGCTGCCCAAGCCCTTTGCGATTGCCGAACTGATCGGCCGCGTCACCGAGCTGCTGGAAG
GCGAGTAA

Upstream 100 bases:

>100_bases
AGTCAGGTATGCAGCCCCTTTCCTGGACTGATCGAACACACATCCATATTCATATGAATGCCACTGCCCCTCCATGCAGA
TTTTCAGGAGCTTGTCCGAA

Downstream 100 bases:

>100_bases
CAAAAAATGAGCGCCATACGGCGCTCATTTTTCGGGTATTGCTATCCGTGAGCCGACTGGCGATCAGTCGCGCAGATCTG
ACTCATGAATCGGCTGATCA

Product: PAS

Products: NA

Alternate protein names: Blue-light-activated histidine kinase; Response regulator [H]

Number of amino acids: Translated: 695; Mature: 695

Protein sequence:

>695_residues
MISPTGFPTANGKAAGIIRSRDWSQTSLGPIEHWPVSLKNTLNLILNSPESMYLLWGPDLVFFHNDAYTPILGPRKDNAI
GALIPDLWADVWDQVAPLVIDAFAGKPCRYTDMPLTMARYGEVEQTWWSFSFSPVIDEYGVVVGMFCITNETTAHVLNQQ
ALQDSERKRLKLIDDLVSLERQQTARLEQRTLELDTFWEISPDPLAILDFNGIFLRVNPAWTALLGHPEHELLGTSIMTL
LHPDDVSGTQNALKHTINHVLPLFENRYQHVDGSYHWFGWTAAPGNGIIFALGKHLTHEKDRIKALRIAEEALIQSQKME
AVGQLTGGLAHDFNNLLMGVTGNMELLLSRIRQERFTELDRYINAALEGSRRAASLTHRLLAFSRRQTLAPKATDIDLLV
VDMDELIRRTVGPAIDMQVNASRGLWATLVDPHQLENSLLNLCINAKDAMPDGGKLLIQTGNRHLTAVTATRYQLPAGRY
VELSVSDSGTGMSNDVMARAFDPFFTTKPTGMGTGLGLSMIYGFARQSGGGVYITSKVGEGSKVSILLPMHEGEAETVAF
DDSPLQVPASSTGDETILVVDDEPAVRLLITELLEDLGYIVLQAERGADALTILQSKAAIDLLITDVGLPGGMNGRQVAD
AARDVRPDLKILFVTGYAENAALAHDTLEPGMHVLPKPFAIAELIGRVTELLEGE

Sequences:

>Translated_695_residues
MISPTGFPTANGKAAGIIRSRDWSQTSLGPIEHWPVSLKNTLNLILNSPESMYLLWGPDLVFFHNDAYTPILGPRKDNAI
GALIPDLWADVWDQVAPLVIDAFAGKPCRYTDMPLTMARYGEVEQTWWSFSFSPVIDEYGVVVGMFCITNETTAHVLNQQ
ALQDSERKRLKLIDDLVSLERQQTARLEQRTLELDTFWEISPDPLAILDFNGIFLRVNPAWTALLGHPEHELLGTSIMTL
LHPDDVSGTQNALKHTINHVLPLFENRYQHVDGSYHWFGWTAAPGNGIIFALGKHLTHEKDRIKALRIAEEALIQSQKME
AVGQLTGGLAHDFNNLLMGVTGNMELLLSRIRQERFTELDRYINAALEGSRRAASLTHRLLAFSRRQTLAPKATDIDLLV
VDMDELIRRTVGPAIDMQVNASRGLWATLVDPHQLENSLLNLCINAKDAMPDGGKLLIQTGNRHLTAVTATRYQLPAGRY
VELSVSDSGTGMSNDVMARAFDPFFTTKPTGMGTGLGLSMIYGFARQSGGGVYITSKVGEGSKVSILLPMHEGEAETVAF
DDSPLQVPASSTGDETILVVDDEPAVRLLITELLEDLGYIVLQAERGADALTILQSKAAIDLLITDVGLPGGMNGRQVAD
AARDVRPDLKILFVTGYAENAALAHDTLEPGMHVLPKPFAIAELIGRVTELLEGE
>Mature_695_residues
MISPTGFPTANGKAAGIIRSRDWSQTSLGPIEHWPVSLKNTLNLILNSPESMYLLWGPDLVFFHNDAYTPILGPRKDNAI
GALIPDLWADVWDQVAPLVIDAFAGKPCRYTDMPLTMARYGEVEQTWWSFSFSPVIDEYGVVVGMFCITNETTAHVLNQQ
ALQDSERKRLKLIDDLVSLERQQTARLEQRTLELDTFWEISPDPLAILDFNGIFLRVNPAWTALLGHPEHELLGTSIMTL
LHPDDVSGTQNALKHTINHVLPLFENRYQHVDGSYHWFGWTAAPGNGIIFALGKHLTHEKDRIKALRIAEEALIQSQKME
AVGQLTGGLAHDFNNLLMGVTGNMELLLSRIRQERFTELDRYINAALEGSRRAASLTHRLLAFSRRQTLAPKATDIDLLV
VDMDELIRRTVGPAIDMQVNASRGLWATLVDPHQLENSLLNLCINAKDAMPDGGKLLIQTGNRHLTAVTATRYQLPAGRY
VELSVSDSGTGMSNDVMARAFDPFFTTKPTGMGTGLGLSMIYGFARQSGGGVYITSKVGEGSKVSILLPMHEGEAETVAF
DDSPLQVPASSTGDETILVVDDEPAVRLLITELLEDLGYIVLQAERGADALTILQSKAAIDLLITDVGLPGGMNGRQVAD
AARDVRPDLKILFVTGYAENAALAHDTLEPGMHVLPKPFAIAELIGRVTELLEGE

Specific function: Photosensitive kinase and response regulator that is involved in increased bacterial virulence upon exposure to light [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788549, Length=377, Percent_Identity=26.525198938992, Blast_Score=94, Evalue=3e-20,
Organism=Escherichia coli, GI1790436, Length=253, Percent_Identity=27.6679841897233, Blast_Score=93, Evalue=7e-20,
Organism=Escherichia coli, GI1788713, Length=429, Percent_Identity=24.7086247086247, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI48994928, Length=545, Percent_Identity=24.954128440367, Blast_Score=76, Evalue=6e-15,
Organism=Escherichia coli, GI1790300, Length=355, Percent_Identity=25.9154929577465, Blast_Score=71, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR011006
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082
- InterPro:   IPR001789 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF00072 Response_reg [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 76375; Mature: 76375

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: PS50112 PAS ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISPTGFPTANGKAAGIIRSRDWSQTSLGPIEHWPVSLKNTLNLILNSPESMYLLWGPDL
CCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHEEEEECCCCCEEEEECCEE
VFFHNDAYTPILGPRKDNAIGALIPDLWADVWDQVAPLVIDAFAGKPCRYTDMPLTMARY
EEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHC
GEVEQTWWSFSFSPVIDEYGVVVGMFCITNETTAHVLNQQALQDSERKRLKLIDDLVSLE
CCHHHHHHEEECCHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQQTARLEQRTLELDTFWEISPDPLAILDFNGIFLRVNPAWTALLGHPEHELLGTSIMTL
HHHHHHHHHHHCCCCEEEECCCCCEEEEECCCEEEEECCCEEEEECCCHHHHHHHHHHEE
LHPDDVSGTQNALKHTINHVLPLFENRYQHVDGSYHWFGWTAAPGNGIIFALGKHLTHEK
ECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEECCCCCCCHH
DRIKALRIAEEALIQSQKMEAVGQLTGGLAHDFNNLLMGVTGNMELLLSRIRQERFTELD
HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHH
RYINAALEGSRRAASLTHRLLAFSRRQTLAPKATDIDLLVVDMDELIRRTVGPAIDMQVN
HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHCCCCEEEEEE
ASRGLWATLVDPHQLENSLLNLCINAKDAMPDGGKLLIQTGNRHLTAVTATRYQLPAGRY
CCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCEEEEEEEEEEECCCCCE
VELSVSDSGTGMSNDVMARAFDPFFTTKPTGMGTGLGLSMIYGFARQSGGGVYITSKVGE
EEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCC
GSKVSILLPMHEGEAETVAFDDSPLQVPASSTGDETILVVDDEPAVRLLITELLEDLGYI
CCEEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCEE
VLQAERGADALTILQSKAAIDLLITDVGLPGGMNGRQVADAARDVRPDLKILFVTGYAEN
EEEECCCCCEEEHHHHCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCC
AALAHDTLEPGMHVLPKPFAIAELIGRVTELLEGE
CCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MISPTGFPTANGKAAGIIRSRDWSQTSLGPIEHWPVSLKNTLNLILNSPESMYLLWGPDL
CCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHEEEEECCCCCEEEEECCEE
VFFHNDAYTPILGPRKDNAIGALIPDLWADVWDQVAPLVIDAFAGKPCRYTDMPLTMARY
EEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHC
GEVEQTWWSFSFSPVIDEYGVVVGMFCITNETTAHVLNQQALQDSERKRLKLIDDLVSLE
CCHHHHHHEEECCHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQQTARLEQRTLELDTFWEISPDPLAILDFNGIFLRVNPAWTALLGHPEHELLGTSIMTL
HHHHHHHHHHHCCCCEEEECCCCCEEEEECCCEEEEECCCEEEEECCCHHHHHHHHHHEE
LHPDDVSGTQNALKHTINHVLPLFENRYQHVDGSYHWFGWTAAPGNGIIFALGKHLTHEK
ECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEECCCCCCCHH
DRIKALRIAEEALIQSQKMEAVGQLTGGLAHDFNNLLMGVTGNMELLLSRIRQERFTELD
HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHH
RYINAALEGSRRAASLTHRLLAFSRRQTLAPKATDIDLLVVDMDELIRRTVGPAIDMQVN
HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHCCCCEEEEEE
ASRGLWATLVDPHQLENSLLNLCINAKDAMPDGGKLLIQTGNRHLTAVTATRYQLPAGRY
CCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCEEEEEEEEEEECCCCCE
VELSVSDSGTGMSNDVMARAFDPFFTTKPTGMGTGLGLSMIYGFARQSGGGVYITSKVGE
EEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCC
GSKVSILLPMHEGEAETVAFDDSPLQVPASSTGDETILVVDDEPAVRLLITELLEDLGYI
CCEEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCEE
VLQAERGADALTILQSKAAIDLLITDVGLPGGMNGRQVADAARDVRPDLKILFVTGYAEN
EEEECCCCCEEEHHHHCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCC
AALAHDTLEPGMHVLPKPFAIAELIGRVTELLEGE
CCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA