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The map label for this gene is yfjD [C]

Identifier: 66044527

GI number: 66044527

Start: 1445063

End: 1446310

Strand: Reverse

Name: yfjD [C]

Synonym: Psyr_1279

Alternate gene names: 66044527

Gene position: 1446310-1445063 (Counterclockwise)

Preceding gene: 66044528

Following gene: 66044526

Centisome position: 23.73

GC content: 58.65

Gene sequence:

>1248_bases
ATGGATAATCTGCCCCTGGGCCCGTTGCTCGGTGTCCTCGCCCTACTGCTGCTGTGGGCCGGTCTGCTGACTGCGGTCGA
AGCCGCTCATCATCAAGTCAAGGCGATGCGCTCTGCCAGCCGCCCGGAAAAGTCGGCGCCGCTCCCCGAACTGGCCTTCA
ACCTGAACAGCCTGATTCTGGGTAATACGCTGATCAGAGTACTGATCAGCGTGATCGCAACGCTTATCGCCGCCAATTAC
TGGCTCTACAACGGTCCGACCGTGGCATGGCTCGCTACCGTGAGCATCATGCTGGTCTTCGCCGAATACATGCCGCGCCG
CCTGGCGAACCGCCACCCTGTCTCGACGCTGCTGCTGGGCAACGGTGTGCTGCGCATCCCGATGAAGATCATCTGGCCGC
TGGCCTACGTGTTCAATGTTCTGGCCAAGACACTGCTGCGTCCCTTCCTGTCTCGCGCCGTACAGCAGCAGGATCAGGAC
TTCGAAGACGACACGCAAAATACTCCGCGCAACGATGCCGCCCAGGAATACTCTCCGCGTGCCAGCGTGCTGTCAGGCAT
TCGTGCGCTGGACAGCATTACCGTCAATGACATCCTGATCCCGCGCAACGAAGTGGATGGCGTCAACCTTGATGACCCCA
TGGAAATGATCATCGAGCGTCTGATCATTTCACGGCACACGCGCCTGCCGGTCTATCACAACGATATCAATCAGGTACAA
GGCGTCATCAATACCCGAGACATCAGCCACCTGCTGCCCAAGGGCACTTTGACCAAGGAGCAGTTGCTGGCGGTCTGCTA
CGAGCCTTATTTCGTACCGGAAAGCACCCCGCTGCAGTTGCAGCTGCTGAATTTCCACAAACAGCAGCGGCGTCTCGGCG
TGGTGGTCGATGAATACGGGGAAGTGCTGGGCATCGTTACCCTCGAGGATATTCTCGAAGAGATTGTCGGCGAGTTCGAA
AGCGAGCAGCGGCTGGATAACCCGCACGTCAAACAACAGGACGACGGGCGTCTCGAAGTCGAAGGCGCAGCGTCCATCCG
CGATTTGAACAAGAGCCTTGGCTGGCACCTGCCGTCAGACGGCCCGAAAACCGTCAACGGACTGGTTACCGAGGCACTGG
AAACCATCCCGGACGCTCCGGTGTGCTTGAAAATAGGGCCTTACCGGCTGGAAATCCTCGAAACCGAGGACAACCGCGTC
AAGCGTGTCGCCATGTGGCAGAACACGCTGGTCCGCACTTTCAAATAG

Upstream 100 bases:

>100_bases
CATTCGCTGGACACTGGGCGGTTTCTGCCTGCTGATGCTCGCCTATTTCGGCAGCAAGCTGGTACGCGAATTCATCCTGC
ACATCTGACGGGCCCTGATC

Downstream 100 bases:

>100_bases
CTGTCTGCGTTCAAATAGATTCCTGAACCGCCCTTGCCTCTCGACCCATTCGGGTTACTCTGCTCGACGCCGCACCCACA
ATCACAATAAATGCACGCTT

Product: CBS:transporter-associated region

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MDNLPLGPLLGVLALLLLWAGLLTAVEAAHHQVKAMRSASRPEKSAPLPELAFNLNSLILGNTLIRVLISVIATLIAANY
WLYNGPTVAWLATVSIMLVFAEYMPRRLANRHPVSTLLLGNGVLRIPMKIIWPLAYVFNVLAKTLLRPFLSRAVQQQDQD
FEDDTQNTPRNDAAQEYSPRASVLSGIRALDSITVNDILIPRNEVDGVNLDDPMEMIIERLIISRHTRLPVYHNDINQVQ
GVINTRDISHLLPKGTLTKEQLLAVCYEPYFVPESTPLQLQLLNFHKQQRRLGVVVDEYGEVLGIVTLEDILEEIVGEFE
SEQRLDNPHVKQQDDGRLEVEGAASIRDLNKSLGWHLPSDGPKTVNGLVTEALETIPDAPVCLKIGPYRLEILETEDNRV
KRVAMWQNTLVRTFK

Sequences:

>Translated_415_residues
MDNLPLGPLLGVLALLLLWAGLLTAVEAAHHQVKAMRSASRPEKSAPLPELAFNLNSLILGNTLIRVLISVIATLIAANY
WLYNGPTVAWLATVSIMLVFAEYMPRRLANRHPVSTLLLGNGVLRIPMKIIWPLAYVFNVLAKTLLRPFLSRAVQQQDQD
FEDDTQNTPRNDAAQEYSPRASVLSGIRALDSITVNDILIPRNEVDGVNLDDPMEMIIERLIISRHTRLPVYHNDINQVQ
GVINTRDISHLLPKGTLTKEQLLAVCYEPYFVPESTPLQLQLLNFHKQQRRLGVVVDEYGEVLGIVTLEDILEEIVGEFE
SEQRLDNPHVKQQDDGRLEVEGAASIRDLNKSLGWHLPSDGPKTVNGLVTEALETIPDAPVCLKIGPYRLEILETEDNRV
KRVAMWQNTLVRTFK
>Mature_415_residues
MDNLPLGPLLGVLALLLLWAGLLTAVEAAHHQVKAMRSASRPEKSAPLPELAFNLNSLILGNTLIRVLISVIATLIAANY
WLYNGPTVAWLATVSIMLVFAEYMPRRLANRHPVSTLLLGNGVLRIPMKIIWPLAYVFNVLAKTLLRPFLSRAVQQQDQD
FEDDTQNTPRNDAAQEYSPRASVLSGIRALDSITVNDILIPRNEVDGVNLDDPMEMIIERLIISRHTRLPVYHNDINQVQ
GVINTRDISHLLPKGTLTKEQLLAVCYEPYFVPESTPLQLQLLNFHKQQRRLGVVVDEYGEVLGIVTLEDILEEIVGEFE
SEQRLDNPHVKQQDDGRLEVEGAASIRDLNKSLGWHLPSDGPKTVNGLVTEALETIPDAPVCLKIGPYRLEILETEDNRV
KRVAMWQNTLVRTFK

Specific function: Unknown

COG id: COG4536

COG function: function code P; Putative Mg2+ and Co2+ transporter CorB

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=288, Percent_Identity=24.6527777777778, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI40068053, Length=272, Percent_Identity=23.8970588235294, Blast_Score=73, Evalue=4e-13,
Organism=Homo sapiens, GI40068055, Length=272, Percent_Identity=23.8970588235294, Blast_Score=73, Evalue=4e-13,
Organism=Homo sapiens, GI94681046, Length=294, Percent_Identity=24.4897959183673, Blast_Score=72, Evalue=8e-13,
Organism=Escherichia coli, GI145693175, Length=384, Percent_Identity=32.8125, Blast_Score=219, Evalue=2e-58,
Organism=Escherichia coli, GI1786879, Length=241, Percent_Identity=27.8008298755187, Blast_Score=96, Evalue=6e-21,
Organism=Escherichia coli, GI87082033, Length=398, Percent_Identity=25.1256281407035, Blast_Score=93, Evalue=4e-20,
Organism=Escherichia coli, GI1790664, Length=317, Percent_Identity=22.7129337539432, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1788119, Length=224, Percent_Identity=29.4642857142857, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 46562; Mature: 46562

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNLPLGPLLGVLALLLLWAGLLTAVEAAHHQVKAMRSASRPEKSAPLPELAFNLNSLIL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
GNTLIRVLISVIATLIAANYWLYNGPTVAWLATVSIMLVFAEYMPRRLANRHPVSTLLLG
HHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHC
NGVLRIPMKIIWPLAYVFNVLAKTLLRPFLSRAVQQQDQDFEDDTQNTPRNDAAQEYSPR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCH
ASVLSGIRALDSITVNDILIPRNEVDGVNLDDPMEMIIERLIISRHTRLPVYHNDINQVQ
HHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCHHHHH
GVINTRDISHLLPKGTLTKEQLLAVCYEPYFVPESTPLQLQLLNFHKQQRRLGVVVDEYG
HHHHHHHHHHHCCCCCCCHHHHHHHHHCCEECCCCCCCCHHHHHHHHHHHHHCHHHHHHH
EVLGIVTLEDILEEIVGEFESEQRLDNPHVKQQDDGRLEVEGAASIRDLNKSLGWHLPSD
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCHHHHHHHHHCCCCCCCC
GPKTVNGLVTEALETIPDAPVCLKIGPYRLEILETEDNRVKRVAMWQNTLVRTFK
CCHHHHHHHHHHHHHCCCCCEEEEECCEEEEEEECCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDNLPLGPLLGVLALLLLWAGLLTAVEAAHHQVKAMRSASRPEKSAPLPELAFNLNSLIL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
GNTLIRVLISVIATLIAANYWLYNGPTVAWLATVSIMLVFAEYMPRRLANRHPVSTLLLG
HHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHC
NGVLRIPMKIIWPLAYVFNVLAKTLLRPFLSRAVQQQDQDFEDDTQNTPRNDAAQEYSPR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCH
ASVLSGIRALDSITVNDILIPRNEVDGVNLDDPMEMIIERLIISRHTRLPVYHNDINQVQ
HHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCHHHHH
GVINTRDISHLLPKGTLTKEQLLAVCYEPYFVPESTPLQLQLLNFHKQQRRLGVVVDEYG
HHHHHHHHHHHCCCCCCCHHHHHHHHHCCEECCCCCCCCHHHHHHHHHHHHHCHHHHHHH
EVLGIVTLEDILEEIVGEFESEQRLDNPHVKQQDDGRLEVEGAASIRDLNKSLGWHLPSD
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCHHHHHHHHHCCCCCCCC
GPKTVNGLVTEALETIPDAPVCLKIGPYRLEILETEDNRVKRVAMWQNTLVRTFK
CCHHHHHHHHHHHHHCCCCCEEEEECCEEEEEEECCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]