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The map label for this gene is secF [H]

Identifier: 66044479

GI number: 66044479

Start: 1389879

End: 1390790

Strand: Direct

Name: secF [H]

Synonym: Psyr_1231

Alternate gene names: 66044479

Gene position: 1389879-1390790 (Clockwise)

Preceding gene: 66044478

Following gene: 66044480

Centisome position: 22.81

GC content: 60.2

Gene sequence:

>912_bases
ATGTTACGTACCATCAACTTCATGGGCGTTCGCAATGTTGCGTTCGCCATCACGATGCTCCTTACCGCACTGGCGTTGTT
CAGCTGGTTCCATAAAGGGCTCAACTTTGGTCTGGACTTCACCGGCGGTACGCTCATCGAGCTGACCTACGAACGTCCCG
CCGACCTGGGCAAGGTCCGTCAGGAGCTGGTTTCGGCGGGCTATCACGAAGCCGTTGTACAGAGCTTTGGCGCCACCACT
GACTTGCTGGTGCGCATGCCGGGTGAAGACCCTCAACTGGGCACTCAGGTTGCCGAGGCGCTGCGCAAGGCCGGTGCCGA
TAACCCGGCAGTGGTCAAGCGTGTCGAATTCGTCGGCCCGCAGGTGGGTGAAGAGCTGCGCGATCAGGGCGGCCTCGGCA
TGCTGATGGCGCTGGGCGGTGTTCTGATCTACCTGGCATTCCGCTTCCAGTGGAAATTCGCCGTCGGGGCGATCATCTCG
CTGATCCACGACGTGGTGGTGACGATGGGTATCCTGTCGTTCTTCCAGATCACCTTCGACCTGACGGTGCTCGCGGCGGT
GCTGGCGATCATCGGTTACTCGCTGAACGACACCATCGTGGTCTTCGACCGGGTACGCGAAAACTTCCGCCTGCTGCGCA
AGGCTTCGCTGATCGAGAACATCAACATCTCCACCACCCAGACACTGCTGCGCACCATTGCCACCTCGGTTTCGACCCTG
CTGGCGATCGTGGCATTGTGGGCATTTGGCGGCGACAGCCTGGAAGGCTTCTCCATCGCGTTGTTCATCGGTGTGCTGGC
GGGTACCTACTCGTCCATCTACATCGCCAACGTGGTGCTGATCTGGCTGAACCTGACCACCGAGGACCTGATTCCTCCAG
TGGTCGTCGAGAAGGCTGACGACCTGCCGTAG

Upstream 100 bases:

>100_bases
CTTTACCTCGATGTTCACGGCCATCATGGTGACCCGCGCTATGGTCAACCTGATCTACGGCGGTCGTGACTTCAAGAAGT
TGTGGATTTAAGGGGCTGCC

Downstream 100 bases:

>100_bases
ATCCGGCCATCATAAAAAAGGCGCGAGTGCTGAACTCGCGCCTTTTTTTATGCTCCAAGGCTAGGCATTGCGCAGCCATG
CTGCGTTTCGATTGGTCAGG

Product: preprotein translocase subunit SecF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MLRTINFMGVRNVAFAITMLLTALALFSWFHKGLNFGLDFTGGTLIELTYERPADLGKVRQELVSAGYHEAVVQSFGATT
DLLVRMPGEDPQLGTQVAEALRKAGADNPAVVKRVEFVGPQVGEELRDQGGLGMLMALGGVLIYLAFRFQWKFAVGAIIS
LIHDVVVTMGILSFFQITFDLTVLAAVLAIIGYSLNDTIVVFDRVRENFRLLRKASLIENINISTTQTLLRTIATSVSTL
LAIVALWAFGGDSLEGFSIALFIGVLAGTYSSIYIANVVLIWLNLTTEDLIPPVVVEKADDLP

Sequences:

>Translated_303_residues
MLRTINFMGVRNVAFAITMLLTALALFSWFHKGLNFGLDFTGGTLIELTYERPADLGKVRQELVSAGYHEAVVQSFGATT
DLLVRMPGEDPQLGTQVAEALRKAGADNPAVVKRVEFVGPQVGEELRDQGGLGMLMALGGVLIYLAFRFQWKFAVGAIIS
LIHDVVVTMGILSFFQITFDLTVLAAVLAIIGYSLNDTIVVFDRVRENFRLLRKASLIENINISTTQTLLRTIATSVSTL
LAIVALWAFGGDSLEGFSIALFIGVLAGTYSSIYIANVVLIWLNLTTEDLIPPVVVEKADDLP
>Mature_303_residues
MLRTINFMGVRNVAFAITMLLTALALFSWFHKGLNFGLDFTGGTLIELTYERPADLGKVRQELVSAGYHEAVVQSFGATT
DLLVRMPGEDPQLGTQVAEALRKAGADNPAVVKRVEFVGPQVGEELRDQGGLGMLMALGGVLIYLAFRFQWKFAVGAIIS
LIHDVVVTMGILSFFQITFDLTVLAAVLAIIGYSLNDTIVVFDRVRENFRLLRKASLIENINISTTQTLLRTIATSVSTL
LAIVALWAFGGDSLEGFSIALFIGVLAGTYSSIYIANVVLIWLNLTTEDLIPPVVVEKADDLP

Specific function: Involved in protein export [H]

COG id: COG0341

COG function: function code U; Preprotein translocase subunit SecF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secD/secF family. SecF subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786610, Length=306, Percent_Identity=44.7712418300654, Blast_Score=269, Evalue=1e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022813
- InterPro:   IPR022646
- InterPro:   IPR022645
- InterPro:   IPR005665 [H]

Pfam domain/function: PF07549 Sec_GG; PF02355 SecD_SecF [H]

EC number: NA

Molecular weight: Translated: 32972; Mature: 32972

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRTINFMGVRNVAFAITMLLTALALFSWFHKGLNFGLDFTGGTLIELTYERPADLGKVR
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHH
QELVSAGYHEAVVQSFGATTDLLVRMPGEDPQLGTQVAEALRKAGADNPAVVKRVEFVGP
HHHHHCCHHHHHHHHHCCCHHEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCH
QVGEELRDQGGLGMLMALGGVLIYLAFRFQWKFAVGAIISLIHDVVVTMGILSFFQITFD
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTVLAAVLAIIGYSLNDTIVVFDRVRENFRLLRKASLIENINISTTQTLLRTIATSVSTL
HHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LAIVALWAFGGDSLEGFSIALFIGVLAGTYSSIYIANVVLIWLNLTTEDLIPPVVVEKAD
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHCCCCHHHCCCC
DLP
CCC
>Mature Secondary Structure
MLRTINFMGVRNVAFAITMLLTALALFSWFHKGLNFGLDFTGGTLIELTYERPADLGKVR
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHH
QELVSAGYHEAVVQSFGATTDLLVRMPGEDPQLGTQVAEALRKAGADNPAVVKRVEFVGP
HHHHHCCHHHHHHHHHCCCHHEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCH
QVGEELRDQGGLGMLMALGGVLIYLAFRFQWKFAVGAIISLIHDVVVTMGILSFFQITFD
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTVLAAVLAIIGYSLNDTIVVFDRVRENFRLLRKASLIENINISTTQTLLRTIATSVSTL
HHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LAIVALWAFGGDSLEGFSIALFIGVLAGTYSSIYIANVVLIWLNLTTEDLIPPVVVEKAD
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHCCCCHHHCCCC
DLP
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]