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The map label for this gene is 66044465

Identifier: 66044465

GI number: 66044465

Start: 1370403

End: 1371377

Strand: Reverse

Name: 66044465

Synonym: Psyr_1214

Alternate gene names: NA

Gene position: 1371377-1370403 (Counterclockwise)

Preceding gene: 66044466

Following gene: 66044464

Centisome position: 22.5

GC content: 62.97

Gene sequence:

>975_bases
ATGTTTGAATTACGCGTACTGAACGGCCAGCACCAAGGCGCGGCATTACCGCTGATCGGTGAGCAATGGTCGATTGGCTC
TGCCGGGCAACACGATCTGGCGCTGGACGATGCGGGCGTGGAAAGCCTGCATTGCCGCCTGCAACGTGTCGACGACAACT
GGACACTGAACGCTGAACAAGGCGCGGTCTGCGACGAACAGGGCAACGCCCGGCCGAGCATCGACCTGACGCTCAATAAC
GCCTTCATGCTGGGTTCGGTGTGGCTGTGCGTTTCGCCTGCAGGCGATGAGTGGCCCTCGGTGCCCGCCGTGATTCCCAA
ACAGCCTGAGGCCGAATCCGGGCAGGCACGCAACGACGTGCCGCTGGAGAAGGTCAAGTCCCGCTCGCAGTTTCTCAACC
GCACCACGGGCATCATCGCCGGGCTGCTGGTGGGCGTCATCGGCAGCGCCTGGAGCCTGACCCGCCCGCCCGCTATTGCG
ATGGATCAGAGCCCGGCGCACCTGGCGGCCGCCACGACAGAGGCCTCGCCCGATACACCCAAGGCGCCAGCCAGGGCGGC
AAACCCTGTGACCGACAACCGCATACGCCTGAGCAGCGCAGATGCCGTCCGCCACCAGTTGAGCACCATGCTCAGCGACC
GTCTGCTGACCGACGTCAGCGTGGAAGAGACGCCCGACGGGCTGATTCTCAACGGCGATCTGAAAGAAGAATCGCTGCTG
GTCTACCAGCGCATGCTTCAGCGCTTCAAGGCCCTGTACGACTCGCCGGTCACCGTTCTGGACAACGTGGGCAGCAATCG
CAACACCCTGCCCTTTGTGGTGGTTCAGATCATGACCGGGCCGCATGCGCACCTGGTGACTGCCGACGGTCGACGTGTGT
ACGTAGGCGATGAAGTGGATGGCCTGCGCCTCACCCGTATCGACAATCAGCGTCTGCAATTCGACGGTAATCGCCATATC
GAGGTGAACTGGTGA

Upstream 100 bases:

>100_bases
CAAGGTCATGGGTCGATTCGACCTTGAAGACGATCTCGAGGCGCTGGACAACGAGCACGCTGCCTGAGCCTGCAAGGCCT
GAATGCACGGAGACTTTCAG

Downstream 100 bases:

>100_bases
ATGCAGCACTGAACCTGTGGAAAGACGCCCACGCCAGGCGTTTGAGCGAGTACTGCGCGGTGCGCGTCATTGGCCGGGTC
AGCGCCGTGCGCGGGATTCT

Product: type III secretion protein HrpQ

Products: NA

Alternate protein names: Type III Secretion Apparatus Protein YscD/HrpQ Family; HrpQ Protein; Type III Secretion HrpQ Protein; YscD/HrpQ Family Type III Secretion Apparatus Protein; Type III Secretion System Protein; Type III Secretion Component Protein HrpQ

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MFELRVLNGQHQGAALPLIGEQWSIGSAGQHDLALDDAGVESLHCRLQRVDDNWTLNAEQGAVCDEQGNARPSIDLTLNN
AFMLGSVWLCVSPAGDEWPSVPAVIPKQPEAESGQARNDVPLEKVKSRSQFLNRTTGIIAGLLVGVIGSAWSLTRPPAIA
MDQSPAHLAAATTEASPDTPKAPARAANPVTDNRIRLSSADAVRHQLSTMLSDRLLTDVSVEETPDGLILNGDLKEESLL
VYQRMLQRFKALYDSPVTVLDNVGSNRNTLPFVVVQIMTGPHAHLVTADGRRVYVGDEVDGLRLTRIDNQRLQFDGNRHI
EVNW

Sequences:

>Translated_324_residues
MFELRVLNGQHQGAALPLIGEQWSIGSAGQHDLALDDAGVESLHCRLQRVDDNWTLNAEQGAVCDEQGNARPSIDLTLNN
AFMLGSVWLCVSPAGDEWPSVPAVIPKQPEAESGQARNDVPLEKVKSRSQFLNRTTGIIAGLLVGVIGSAWSLTRPPAIA
MDQSPAHLAAATTEASPDTPKAPARAANPVTDNRIRLSSADAVRHQLSTMLSDRLLTDVSVEETPDGLILNGDLKEESLL
VYQRMLQRFKALYDSPVTVLDNVGSNRNTLPFVVVQIMTGPHAHLVTADGRRVYVGDEVDGLRLTRIDNQRLQFDGNRHI
EVNW
>Mature_324_residues
MFELRVLNGQHQGAALPLIGEQWSIGSAGQHDLALDDAGVESLHCRLQRVDDNWTLNAEQGAVCDEQGNARPSIDLTLNN
AFMLGSVWLCVSPAGDEWPSVPAVIPKQPEAESGQARNDVPLEKVKSRSQFLNRTTGIIAGLLVGVIGSAWSLTRPPAIA
MDQSPAHLAAATTEASPDTPKAPARAANPVTDNRIRLSSADAVRHQLSTMLSDRLLTDVSVEETPDGLILNGDLKEESLL
VYQRMLQRFKALYDSPVTVLDNVGSNRNTLPFVVVQIMTGPHAHLVTADGRRVYVGDEVDGLRLTRIDNQRLQFDGNRHI
EVNW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35282; Mature: 35282

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFELRVLNGQHQGAALPLIGEQWSIGSAGQHDLALDDAGVESLHCRLQRVDDNWTLNAEQ
CEEEEEECCCCCCCEEEEECCCCCCCCCCCCCEEECCCCHHHHHHEEEECCCCEEEECCC
GAVCDEQGNARPSIDLTLNNAFMLGSVWLCVSPAGDEWPSVPAVIPKQPEAESGQARNDV
CCCCCCCCCCCCEEEEEECCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PLEKVKSRSQFLNRTTGIIAGLLVGVIGSAWSLTRPPAIAMDQSPAHLAAATTEASPDTP
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCEEEEECCCCCCCC
KAPARAANPVTDNRIRLSSADAVRHQLSTMLSDRLLTDVSVEETPDGLILNGDLKEESLL
CCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHH
VYQRMLQRFKALYDSPVTVLDNVGSNRNTLPFVVVQIMTGPHAHLVTADGRRVYVGDEVD
HHHHHHHHHHHHHCCCCCEECCCCCCCCCCEEEEEEEECCCCEEEEEECCCEEEECCCCC
GLRLTRIDNQRLQFDGNRHIEVNW
CEEEEEECCCEEEECCCEEEEEEC
>Mature Secondary Structure
MFELRVLNGQHQGAALPLIGEQWSIGSAGQHDLALDDAGVESLHCRLQRVDDNWTLNAEQ
CEEEEEECCCCCCCEEEEECCCCCCCCCCCCCEEECCCCHHHHHHEEEECCCCEEEECCC
GAVCDEQGNARPSIDLTLNNAFMLGSVWLCVSPAGDEWPSVPAVIPKQPEAESGQARNDV
CCCCCCCCCCCCEEEEEECCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PLEKVKSRSQFLNRTTGIIAGLLVGVIGSAWSLTRPPAIAMDQSPAHLAAATTEASPDTP
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCEEEEECCCCCCCC
KAPARAANPVTDNRIRLSSADAVRHQLSTMLSDRLLTDVSVEETPDGLILNGDLKEESLL
CCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHH
VYQRMLQRFKALYDSPVTVLDNVGSNRNTLPFVVVQIMTGPHAHLVTADGRRVYVGDEVD
HHHHHHHHHHHHHCCCCCEECCCCCCCCCCEEEEEEEECCCCEEEEEECCCEEEECCCCC
GLRLTRIDNQRLQFDGNRHIEVNW
CEEEEEECCCEEEECCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA