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The map label for this gene is hrpI [H]

Identifier: 66044466

GI number: 66044466

Start: 1371411

End: 1373498

Strand: Reverse

Name: hrpI [H]

Synonym: Psyr_1215

Alternate gene names: 66044466

Gene position: 1373498-1371411 (Counterclockwise)

Preceding gene: 66044467

Following gene: 66044465

Centisome position: 22.54

GC content: 60.34

Gene sequence:

>2088_bases
ATGAACCGGGTCATCAACTTTCTGAACATGGTCGCGCTGTCGGCCATGCGCCGCTCGGAACTGGTCGGTGCGTTTTTTGT
GATCGCCATCGTGTTCATGATGATCACGCCGCTGCCCACCGGGTTGATCGACGTGCTGATCGCCGTGAACATCTGTATTT
CCTGCCTGCTGATCATGCTGGCGATGCACCTGCCCAGGCCACTGGCGTTCTCGACCTTCCCTGCCGTGCTGCTGCTGACC
ACGATGTTTCGCCTGGCCCTGTCGGTTTCCACCACGCGGCTGATTCTGCTCAACCAGGACGCCGGGCACATCGTCGAGGC
GTTCGGGCAGTTCGTGGTGGGCGGCAACCTGGCGGTGGGTCTGGTGATCTTCCTGATCCTGACGGTGGTCAACTTTCTGG
TGATCACCAAAGGTTCGGAACGGGTCGCCGAAGTCGGTGCGCGGTTCACTCTGGATGCGATGCCCGGCAAGCAGATGTCC
ATCGACAGTGACCTGCGCGCCAACCTGATCACCGTCCACGAGGCCCGTAAACGACGCGCCGAACTGAACAAGGAAAGCCA
GTTGTTCGGTGCGATGGACGGCGCCATGAAATTCGTCAACGGCGATGCGATCGCCAGCCTGATCATTGTTGCCATCAACA
TGATCGGCGGCATTTCCATCGGTGTGCTTCAGCACAACATGGCGGCGGGCGACGCCTTGCAGCTGTATACCGTACTGACC
ATCGGTGACGGTCTGATCGCGCAGATTCCGGCCCTGCTGATCTCCGTGACCAGCGGCATGATCATCACCCGCGTGCCCAA
CACCGAGGCGGGTGTGGAAGCCAACATCGGCCGCGAGATCGCCGAGCAGATTACCAGCCAGCCCAAGGCCTGGATCATCG
CCTCGGTGGCCATGCTCGGCTTCGCTGCACTGCCGGGAATGCCGACCGGTGTTTTCATCACCATCGCGATCATCTGCGGT
GCCGGTGGACTGCTGCAGTTGCAACGGGCAAAACCCAAGGCCGATGAGCAACGTACAGCCACTGTGGCGCCAGAAATGAA
CGGCAAGGAAGACCTGCGTACTTTCTCGCCCAGCCGCCAGTTTGTGCTGCAATTCCACCCCGGTCAGGACAGCGCGCAGA
TCGAAGCGCTGGTCAGCGAAATACGCAAGCGCCGCAACCGTCTGGTGGTGCAGTACGGCCTGACCCTGCCTTCGTTCATC
ATCGAGCACGTCGATGACATTGCCCCGGACGAGTTTCGCTTCACCGTCTATGACGTACCGATGCTCAAGGCCACCTTTAC
GCAGAGCCATGTCGCCGTGGAAGCGCGCCAGCTGGAAGGTGAAAACCTTCCGGCAGCCATCCCGGGCAATACCGACCGCC
AGGAAGATCAATGGGTCTGGCTGCCTGCCGAGCAGTCCGGCGAATTGAACCCGGTCAGTTCCACGACCCTGATCATCGAA
CGCATGGAGCGCGCATTGCAGTCCTGCGCACCGCAGTTCATCGGCTTGCAGGAAACCAAAGCCATCCTCGGCTGGCTGGA
GTCCGAGCAACCGGAACTCGCTCAGGAAATGCAACGGGTCCTCACCCTGACGCGCTTCTCGGCTGTCCTGCAACGCCTGG
CCTCGGAGTGTGTGCCGCTGCGGGCGATCCGGGTCATTGCCGAAACCCTGATCGAGCACTGTCAGCATGAACGCGATACC
AATGTGCTGACCGACTATGTGCGCATTGCGCTCAAGTCGCAGATCTACCACCAGTACTGCGGTGCCGAAGGCCTGCAAGT
GTGGCTGCTGACGCCGGAAAGCGAGGGGTTGTTGCGTGATGGCCTGCGCCAGACGCAAACCGAAACATTCTTCGCGCTGA
GCAACGAGATCAGCCAGATGCTCGTGCAACAGCTGCACATTGCCTTCCCGGTACGAGCTCCCGAACAGGCGGTTCTGCTG
GTGGCACAGGATCTGCGCAGCCCTCTGCGTACATTGTTGAGGGAGGAGTTCTACCATGTACCCGTACTATCTTTCGCGGA
AATCAGCAACGCGGCCAAGGTCAAGGTCATGGGTCGATTCGACCTTGAAGACGATCTCGAGGCGCTGGACAACGAGCACG
CTGCCTGA

Upstream 100 bases:

>100_bases
GGGACCTGAAAAGCCGCCAGGCCGCGCTGAATAATCTACTCACGCTGATGGCCGAGCTTACGCAGAAGGAACAGAAGCAA
CTATACGAGGGGCTTGCCTG

Downstream 100 bases:

>100_bases
GCCTGCAAGGCCTGAATGCACGGAGACTTTCAGATGTTTGAATTACGCGTACTGAACGGCCAGCACCAAGGCGCGGCATT
ACCGCTGATCGGTGAGCAAT

Product: Type III secretion protein HrcV

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 695; Mature: 695

Protein sequence:

>695_residues
MNRVINFLNMVALSAMRRSELVGAFFVIAIVFMMITPLPTGLIDVLIAVNICISCLLIMLAMHLPRPLAFSTFPAVLLLT
TMFRLALSVSTTRLILLNQDAGHIVEAFGQFVVGGNLAVGLVIFLILTVVNFLVITKGSERVAEVGARFTLDAMPGKQMS
IDSDLRANLITVHEARKRRAELNKESQLFGAMDGAMKFVNGDAIASLIIVAINMIGGISIGVLQHNMAAGDALQLYTVLT
IGDGLIAQIPALLISVTSGMIITRVPNTEAGVEANIGREIAEQITSQPKAWIIASVAMLGFAALPGMPTGVFITIAIICG
AGGLLQLQRAKPKADEQRTATVAPEMNGKEDLRTFSPSRQFVLQFHPGQDSAQIEALVSEIRKRRNRLVVQYGLTLPSFI
IEHVDDIAPDEFRFTVYDVPMLKATFTQSHVAVEARQLEGENLPAAIPGNTDRQEDQWVWLPAEQSGELNPVSSTTLIIE
RMERALQSCAPQFIGLQETKAILGWLESEQPELAQEMQRVLTLTRFSAVLQRLASECVPLRAIRVIAETLIEHCQHERDT
NVLTDYVRIALKSQIYHQYCGAEGLQVWLLTPESEGLLRDGLRQTQTETFFALSNEISQMLVQQLHIAFPVRAPEQAVLL
VAQDLRSPLRTLLREEFYHVPVLSFAEISNAAKVKVMGRFDLEDDLEALDNEHAA

Sequences:

>Translated_695_residues
MNRVINFLNMVALSAMRRSELVGAFFVIAIVFMMITPLPTGLIDVLIAVNICISCLLIMLAMHLPRPLAFSTFPAVLLLT
TMFRLALSVSTTRLILLNQDAGHIVEAFGQFVVGGNLAVGLVIFLILTVVNFLVITKGSERVAEVGARFTLDAMPGKQMS
IDSDLRANLITVHEARKRRAELNKESQLFGAMDGAMKFVNGDAIASLIIVAINMIGGISIGVLQHNMAAGDALQLYTVLT
IGDGLIAQIPALLISVTSGMIITRVPNTEAGVEANIGREIAEQITSQPKAWIIASVAMLGFAALPGMPTGVFITIAIICG
AGGLLQLQRAKPKADEQRTATVAPEMNGKEDLRTFSPSRQFVLQFHPGQDSAQIEALVSEIRKRRNRLVVQYGLTLPSFI
IEHVDDIAPDEFRFTVYDVPMLKATFTQSHVAVEARQLEGENLPAAIPGNTDRQEDQWVWLPAEQSGELNPVSSTTLIIE
RMERALQSCAPQFIGLQETKAILGWLESEQPELAQEMQRVLTLTRFSAVLQRLASECVPLRAIRVIAETLIEHCQHERDT
NVLTDYVRIALKSQIYHQYCGAEGLQVWLLTPESEGLLRDGLRQTQTETFFALSNEISQMLVQQLHIAFPVRAPEQAVLL
VAQDLRSPLRTLLREEFYHVPVLSFAEISNAAKVKVMGRFDLEDDLEALDNEHAA
>Mature_695_residues
MNRVINFLNMVALSAMRRSELVGAFFVIAIVFMMITPLPTGLIDVLIAVNICISCLLIMLAMHLPRPLAFSTFPAVLLLT
TMFRLALSVSTTRLILLNQDAGHIVEAFGQFVVGGNLAVGLVIFLILTVVNFLVITKGSERVAEVGARFTLDAMPGKQMS
IDSDLRANLITVHEARKRRAELNKESQLFGAMDGAMKFVNGDAIASLIIVAINMIGGISIGVLQHNMAAGDALQLYTVLT
IGDGLIAQIPALLISVTSGMIITRVPNTEAGVEANIGREIAEQITSQPKAWIIASVAMLGFAALPGMPTGVFITIAIICG
AGGLLQLQRAKPKADEQRTATVAPEMNGKEDLRTFSPSRQFVLQFHPGQDSAQIEALVSEIRKRRNRLVVQYGLTLPSFI
IEHVDDIAPDEFRFTVYDVPMLKATFTQSHVAVEARQLEGENLPAAIPGNTDRQEDQWVWLPAEQSGELNPVSSTTLIIE
RMERALQSCAPQFIGLQETKAILGWLESEQPELAQEMQRVLTLTRFSAVLQRLASECVPLRAIRVIAETLIEHCQHERDT
NVLTDYVRIALKSQIYHQYCGAEGLQVWLLTPESEGLLRDGLRQTQTETFFALSNEISQMLVQQLHIAFPVRAPEQAVLL
VAQDLRSPLRTLLREEFYHVPVLSFAEISNAAKVKVMGRFDLEDDLEALDNEHAA

Specific function: Involved in the secretion of harpin-pss; a proteinaceous elicitor of the hypersensitivity response in plants [H]

COG id: COG4789

COG function: function code U; Type III secretory pathway, component EscV

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family [H]

Homologues:

Organism=Escherichia coli, GI1788187, Length=704, Percent_Identity=35.7954545454545, Blast_Score=343, Evalue=2e-95,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001712
- InterPro:   IPR006302 [H]

Pfam domain/function: PF00771 FHIPEP [H]

EC number: NA

Molecular weight: Translated: 76483; Mature: 76483

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: PS00994 FHIPEP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRVINFLNMVALSAMRRSELVGAFFVIAIVFMMITPLPTGLIDVLIAVNICISCLLIML
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
AMHLPRPLAFSTFPAVLLLTTMFRLALSVSTTRLILLNQDAGHIVEAFGQFVVGGNLAVG
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHCCCCHHHH
LVIFLILTVVNFLVITKGSERVAEVGARFTLDAMPGKQMSIDSDLRANLITVHEARKRRA
HHHHHHHHHHHHHHHCCCCHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHH
ELNKESQLFGAMDGAMKFVNGDAIASLIIVAINMIGGISIGVLQHNMAAGDALQLYTVLT
HCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCEEHHHHHCCCCCCHHHHEEHEE
IGDGLIAQIPALLISVTSGMIITRVPNTEAGVEANIGREIAEQITSQPKAWIIASVAMLG
ECCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHH
FAALPGMPTGVFITIAIICGAGGLLQLQRAKPKADEQRTATVAPEMNGKEDLRTFSPSRQ
HHHCCCCCCHHHHHHHHHHCCCCCEEECCCCCCCCCCCCEEECCCCCCHHHHHHCCCCCE
FVLQFHPGQDSAQIEALVSEIRKRRNRLVVQYGLTLPSFIIEHVDDIAPDEFRFTVYDVP
EEEEECCCCCHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHCCCCCEEEEEEECC
MLKATFTQSHVAVEARQLEGENLPAAIPGNTDRQEDQWVWLPAEQSGELNPVSSTTLIIE
HHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHH
RMERALQSCAPQFIGLQETKAILGWLESEQPELAQEMQRVLTLTRFSAVLQRLASECVPL
HHHHHHHHHCHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
RAIRVIAETLIEHCQHERDTNVLTDYVRIALKSQIYHQYCGAEGLQVWLLTPESEGLLRD
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHH
GLRQTQTETFFALSNEISQMLVQQLHIAFPVRAPEQAVLLVAQDLRSPLRTLLREEFYHV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
PVLSFAEISNAAKVKVMGRFDLEDDLEALDNEHAA
CCHHHHHHCCCCEEEEEEECCCHHHHHHHCCCCCC
>Mature Secondary Structure
MNRVINFLNMVALSAMRRSELVGAFFVIAIVFMMITPLPTGLIDVLIAVNICISCLLIML
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
AMHLPRPLAFSTFPAVLLLTTMFRLALSVSTTRLILLNQDAGHIVEAFGQFVVGGNLAVG
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHCCCCHHHH
LVIFLILTVVNFLVITKGSERVAEVGARFTLDAMPGKQMSIDSDLRANLITVHEARKRRA
HHHHHHHHHHHHHHHCCCCHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHH
ELNKESQLFGAMDGAMKFVNGDAIASLIIVAINMIGGISIGVLQHNMAAGDALQLYTVLT
HCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCEEHHHHHCCCCCCHHHHEEHEE
IGDGLIAQIPALLISVTSGMIITRVPNTEAGVEANIGREIAEQITSQPKAWIIASVAMLG
ECCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHH
FAALPGMPTGVFITIAIICGAGGLLQLQRAKPKADEQRTATVAPEMNGKEDLRTFSPSRQ
HHHCCCCCCHHHHHHHHHHCCCCCEEECCCCCCCCCCCCEEECCCCCCHHHHHHCCCCCE
FVLQFHPGQDSAQIEALVSEIRKRRNRLVVQYGLTLPSFIIEHVDDIAPDEFRFTVYDVP
EEEEECCCCCHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHCCCCCEEEEEEECC
MLKATFTQSHVAVEARQLEGENLPAAIPGNTDRQEDQWVWLPAEQSGELNPVSSTTLIIE
HHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHH
RMERALQSCAPQFIGLQETKAILGWLESEQPELAQEMQRVLTLTRFSAVLQRLASECVPL
HHHHHHHHHCHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
RAIRVIAETLIEHCQHERDTNVLTDYVRIALKSQIYHQYCGAEGLQVWLLTPESEGLLRD
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHH
GLRQTQTETFFALSNEISQMLVQQLHIAFPVRAPEQAVLLVAQDLRSPLRTLLREEFYHV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
PVLSFAEISNAAKVKVMGRFDLEDDLEALDNEHAA
CCHHHHHHCCCCEEEEEEECCCHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8400380 [H]