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The map label for this gene is HrcT [H]

Identifier: 66044457

GI number: 66044457

Start: 1365209

End: 1366003

Strand: Reverse

Name: HrcT [H]

Synonym: Psyr_1206

Alternate gene names: 66044457

Gene position: 1366003-1365209 (Counterclockwise)

Preceding gene: 66044458

Following gene: 66044456

Centisome position: 22.42

GC content: 60.25

Gene sequence:

>795_bases
ATGCCCTTCGACGCGCACAGCGCCTTTCAATTCATGCTGGGCATGGGACTGGCAATGGCGCGGCTGATGCCCTGCATGCT
GCTGGTGCCAGCCTTTTGCTTCAAATACCTGAAAGGCCCGTTGCGTTATGCCGTCGTGGCGGTGATGGCGATGATCCCGG
CACCGGCCATCAGCAAGGCTCTGGAGTCCCTCGACGACAACTGGTTCGCAATCGGCGGCCTGCTGATCAAGGAAGCGGTA
CTCGGCACGCTACTGGGGCTATTGCTGTATGCGCCATTCTGGATGTTCGCCTCGGTGGGCGCGCTGCTCGACAGCCAGCG
CGGTGCGCTCAGCGGCGGCCAGTTGAACCCGGCGCTGGGCCCTGACGCCACGCCACTGGGCGAATTGTTTCAAGAAACCC
TGATCATGCTGGTAATCCTCACCGGGGGGCTTTCGCTGATGACTCAGATCATCTGGGACAGCTACAGCGTCTGGCCTCCA
ACGGCCTGGATGCCGGGCATGAACGCTGGCGGCCTGGATGTCTTTCTGGAGCAGTTGAACCAGACGATGCAGCACATGCT
GCTGTACGCGGCGCCCTTCATTGCGCTGCTGCTGTTGATCGAAGCGGCGTTCGCGATCATTGGTCTGTATGCGCAACAGC
TGAACGTTTCGATCCTCGCCATGCCGGCCAAGAGTATGGCCGGCCTCGCTTTTCTGCTGATCTATCTGCCGACGCTGCTG
GAACTGGGCACCGGTCAATTGTTGAAGCTGGTTGATCTGAAGTCGCTACTGACGCTTCTGGTGCAAGTGCCGTGA

Upstream 100 bases:

>100_bases
ACTGACCCTGGCCATGACCGGCCGCTGGATCGGCGTCGAGCTGATCGAGTTCATCAATATGGCCTTCGACCTGATTGCCC
GCTCCGGGGTCAGTCACTAA

Downstream 100 bases:

>100_bases
GCGAAAAAACCGAAAAGGCCACGCCCAAGCAACTGCGTGACGCGCGGGAAAAGGGTCAGGTCGGGCAGAGTCAGGACCTC
GGCAAACTGCTGGTGTTGAT

Product: type III secretion protein HrcT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 263

Protein sequence:

>264_residues
MPFDAHSAFQFMLGMGLAMARLMPCMLLVPAFCFKYLKGPLRYAVVAVMAMIPAPAISKALESLDDNWFAIGGLLIKEAV
LGTLLGLLLYAPFWMFASVGALLDSQRGALSGGQLNPALGPDATPLGELFQETLIMLVILTGGLSLMTQIIWDSYSVWPP
TAWMPGMNAGGLDVFLEQLNQTMQHMLLYAAPFIALLLLIEAAFAIIGLYAQQLNVSILAMPAKSMAGLAFLLIYLPTLL
ELGTGQLLKLVDLKSLLTLLVQVP

Sequences:

>Translated_264_residues
MPFDAHSAFQFMLGMGLAMARLMPCMLLVPAFCFKYLKGPLRYAVVAVMAMIPAPAISKALESLDDNWFAIGGLLIKEAV
LGTLLGLLLYAPFWMFASVGALLDSQRGALSGGQLNPALGPDATPLGELFQETLIMLVILTGGLSLMTQIIWDSYSVWPP
TAWMPGMNAGGLDVFLEQLNQTMQHMLLYAAPFIALLLLIEAAFAIIGLYAQQLNVSILAMPAKSMAGLAFLLIYLPTLL
ELGTGQLLKLVDLKSLLTLLVQVP
>Mature_263_residues
PFDAHSAFQFMLGMGLAMARLMPCMLLVPAFCFKYLKGPLRYAVVAVMAMIPAPAISKALESLDDNWFAIGGLLIKEAVL
GTLLGLLLYAPFWMFASVGALLDSQRGALSGGQLNPALGPDATPLGELFQETLIMLVILTGGLSLMTQIIWDSYSVWPPT
AWMPGMNAGGLDVFLEQLNQTMQHMLLYAAPFIALLLLIEAAFAIIGLYAQQLNVSILAMPAKSMAGLAFLLIYLPTLLE
LGTGQLLKLVDLKSLLTLLVQVP

Specific function: Component of the yop secretion machinery [H]

COG id: COG4791

COG function: function code U; Type III secretory pathway, component EscT

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliR/mopE/spaR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002010
- InterPro:   IPR006304 [H]

Pfam domain/function: PF01311 Bac_export_1 [H]

EC number: NA

Molecular weight: Translated: 28461; Mature: 28330

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
6.4 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PFDAHSAFQFMLGMGLAMARLMPCMLLVPAFCFKYLKGPLRYAVVAVMAMIPAPAISKA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
LESLDDNWFAIGGLLIKEAVLGTLLGLLLYAPFWMFASVGALLDSQRGALSGGQLNPALG
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDATPLGELFQETLIMLVILTGGLSLMTQIIWDSYSVWPPTAWMPGMNAGGLDVFLEQLN
CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH
QTMQHMLLYAAPFIALLLLIEAAFAIIGLYAQQLNVSILAMPAKSMAGLAFLLIYLPTLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEECHHHHHHHHHHHHHHHHHH
ELGTGQLLKLVDLKSLLTLLVQVP
HHCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9746557; 9748454; 11586360 [H]