Click here to switch to the map view.

The map label for this gene is HrcS [H]

Identifier: 66044458

GI number: 66044458

Start: 1366004

End: 1366270

Strand: Reverse

Name: HrcS [H]

Synonym: Psyr_1207

Alternate gene names: 66044458

Gene position: 1366270-1366004 (Counterclockwise)

Preceding gene: 66044459

Following gene: 66044457

Centisome position: 22.42

GC content: 60.67

Gene sequence:

>267_bases
ATGGAAGCGTTGGCGTTGTTCAAGCAAGGCATGTTTCTGGTCGTCATCCTGACCGCCCCGCCGCTGGCCGTTGCGGTGCT
GGTGGGTGTGGTCACCTCGCTGCTGCAGGCACTCATGCAGATTCAGGATCAGACATTGCCCTTCGGCATCAAACTGGGCG
CCGTCGGACTGACCCTGGCCATGACCGGCCGCTGGATCGGCGTCGAGCTGATCGAGTTCATCAATATGGCCTTCGACCTG
ATTGCCCGCTCCGGGGTCAGTCACTAA

Upstream 100 bases:

>100_bases
ATGACACTGTCGCTGCCGCTCAAACTGCTGCTGTTCGTGCTCGTATCGGGCTGGTCGCGTCTGCTCGACAGCCTGTTCTA
TTCCTACATGTGAGGCGGTC

Downstream 100 bases:

>100_bases
ATGCCCTTCGACGCGCACAGCGCCTTTCAATTCATGCTGGGCATGGGACTGGCAATGGCGCGGCTGATGCCCTGCATGCT
GCTGGTGCCAGCCTTTTGCT

Product: type III secretion protein HrcS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MEALALFKQGMFLVVILTAPPLAVAVLVGVVTSLLQALMQIQDQTLPFGIKLGAVGLTLAMTGRWIGVELIEFINMAFDL
IARSGVSH

Sequences:

>Translated_88_residues
MEALALFKQGMFLVVILTAPPLAVAVLVGVVTSLLQALMQIQDQTLPFGIKLGAVGLTLAMTGRWIGVELIEFINMAFDL
IARSGVSH
>Mature_88_residues
MEALALFKQGMFLVVILTAPPLAVAVLVGVVTSLLQALMQIQDQTLPFGIKLGAVGLTLAMTGRWIGVELIEFINMAFDL
IARSGVSH

Specific function: Component of the Yop secretion machinery [H]

COG id: COG4794

COG function: function code U; Type III secretory pathway, component EscS

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliQ/MopD/SpaQ family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002191
- InterPro:   IPR006306 [H]

Pfam domain/function: PF01313 Bac_export_3 [H]

EC number: NA

Molecular weight: Translated: 9381; Mature: 9381

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEALALFKQGMFLVVILTAPPLAVAVLVGVVTSLLQALMQIQDQTLPFGIKLGAVGLTLA
CCHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHH
MTGRWIGVELIEFINMAFDLIARSGVSH
HCCCHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MEALALFKQGMFLVVILTAPPLAVAVLVGVVTSLLQALMQIQDQTLPFGIKLGAVGLTLA
CCHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHH
MTGRWIGVELIEFINMAFDLIARSGVSH
HCCCHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8300512; 9746557; 9748454; 11586360 [H]