| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is ypeB [C]
Identifier: 66044374
GI number: 66044374
Start: 1272250
End: 1272489
Strand: Reverse
Name: ypeB [C]
Synonym: Psyr_1123
Alternate gene names: 66044374
Gene position: 1272489-1272250 (Counterclockwise)
Preceding gene: 66044376
Following gene: 66044370
Centisome position: 20.88
GC content: 55.83
Gene sequence:
>240_bases ATGAACCCGGAAAAACTCAAGTTGCTGGTGACACAGGAAATGCCGTTCGGCAAATACAAGGGCCGGCTGATCGCTGATTT ACCAGGGCATTACCTGAACTGGTTCGCCCGCGAAGGCTTTCCCAAAGGAGAGTTGGGCGGCTTGTTGGCGCTGATGCAGG AAATCGATCACAACGGCCTTGGCGCGCTATTGGACCCGTTGCGCACGCGTCCACGTCAGTCGTTCAAGGACAAGGGGTAA
Upstream 100 bases:
>100_bases CACATTTGCCCGTTCGTGACTTCTGCATGATCTGCGGTTTGGCCTGCATGCAGAATGCACGTATCGTACAAGCTGAGACA GAAACGCAGGCTTATCGCGA
Downstream 100 bases:
>100_bases AAACGAAGAGAAGGTCCGGGGAGAAAAAAACGGTGCTCCGGACCAGGGAGCACCGAAAAGCCATACAACCAACAACAACT TCCTTGTCGGAATCAGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 79; Mature: 79
Protein sequence:
>79_residues MNPEKLKLLVTQEMPFGKYKGRLIADLPGHYLNWFAREGFPKGELGGLLALMQEIDHNGLGALLDPLRTRPRQSFKDKG
Sequences:
>Translated_79_residues MNPEKLKLLVTQEMPFGKYKGRLIADLPGHYLNWFAREGFPKGELGGLLALMQEIDHNGLGALLDPLRTRPRQSFKDKG >Mature_79_residues MNPEKLKLLVTQEMPFGKYKGRLIADLPGHYLNWFAREGFPKGELGGLLALMQEIDHNGLGALLDPLRTRPRQSFKDKG
Specific function: Unknown
COG id: COG3530
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082098, Length=72, Percent_Identity=48.6111111111111, Blast_Score=61, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8935; Mature: 8935
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPEKLKLLVTQEMPFGKYKGRLIADLPGHYLNWFAREGFPKGELGGLLALMQEIDHNGL CCCCCEEEEECCCCCCCCCCCEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCC GALLDPLRTRPRQSFKDKG HHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MNPEKLKLLVTQEMPFGKYKGRLIADLPGHYLNWFAREGFPKGELGGLLALMQEIDHNGL CCCCCEEEEECCCCCCCCCCCEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCC GALLDPLRTRPRQSFKDKG HHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA