| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is artQ [H]
Identifier: 66044226
GI number: 66044226
Start: 1105608
End: 1106450
Strand: Reverse
Name: artQ [H]
Synonym: Psyr_0973
Alternate gene names: 66044226
Gene position: 1106450-1105608 (Counterclockwise)
Preceding gene: 66044227
Following gene: 66044222
Centisome position: 18.16
GC content: 60.74
Gene sequence:
>843_bases ATGACTTCCTTTCAGCCCCAGCGCCCACCCGAGCAGGCCGAGCAGGCCGAGCAGAGCCTGCTCAAGCGAGTTTTCGGCTT CCGTACGCGGCTTTACCTGACCTGGCTGGTCATGTTCGTGCTGTTCGCCGGCTTCTTCCTGAGCTTCGATCTGAAGCTGT CGATCATCCTCGACAAGCTGCCGAACCTGATCGGGCTGCATCTGGCCCCCAACGGCTTTCTGCAGGGCGCGGCGCTGACA TTGTTCGTGTCAGTGTGCTCGATCGTGGTCTCGGTCGTGCTTGGCTTTGTCACTGCACTCGCACGGCTCTCCAGCAGCGC AGTGGCGTTTGGCATCGCCAGCTTCTACGCCTCGTTCTTTCGTGGCACGCCGCTGCTGATCCAGATCCTGTTGATCTATC TCGGTCTGCCACAACTTGGCATCGTGCCCGGAGCCATCACGGCGGGAGTGATCGCGCTGTCGCTCAACTACGGGGCTTAC CTGAGCGAGATTTTCCGTGCGGGCATCATCGGCGTCTCCGTCGGGCAGCGTGAAGCCGCACTGGCCCTGGCGCTGCGCCC GACGCAGATCTTCTGGCGCGTCACCCTGCCCCAGGCCATGCGCACGATCATTCCGCCGACCACCAACCAGTTCATCTCCA TGCTCAAGGACTCTTCCCTGATTTCAGTGATGGGCGTCTGGGAAGTGATGTTTCTCGCGCAGTCTTACGGCCGCTCCAGC TATCGATACATCGAAATGCTGACCACTGCGGCGGTGCTGTACTGGATCATGTCGATCGGGCTGGAGTTGTTGCAGTCACG ACTGGAGCGGCATTACGGCAAGGCGTATCAGGCACGCAAGTGA
Upstream 100 bases:
>100_bases CGGAATGGGACGCCAAGGTTCGCGAAGTCTTCGCCGAACTCAAGAGCGACGGCACCCTGAGCAAGCTGTCGCAAAAGTGG ATCGGTGCTGACATCAGCAA
Downstream 100 bases:
>100_bases CTGCAGCGTTCGTCCTCACGCTTTGCGCTCAGTGTTATACGCAAGTCTGTTTTTGATTCTGGCCGAAGGCCGTGGGAGCG AACTTGTTCGCGAAGGGGGT
Product: amino acid ABC transporter permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MTSFQPQRPPEQAEQAEQSLLKRVFGFRTRLYLTWLVMFVLFAGFFLSFDLKLSIILDKLPNLIGLHLAPNGFLQGAALT LFVSVCSIVVSVVLGFVTALARLSSSAVAFGIASFYASFFRGTPLLIQILLIYLGLPQLGIVPGAITAGVIALSLNYGAY LSEIFRAGIIGVSVGQREAALALALRPTQIFWRVTLPQAMRTIIPPTTNQFISMLKDSSLISVMGVWEVMFLAQSYGRSS YRYIEMLTTAAVLYWIMSIGLELLQSRLERHYGKAYQARK
Sequences:
>Translated_280_residues MTSFQPQRPPEQAEQAEQSLLKRVFGFRTRLYLTWLVMFVLFAGFFLSFDLKLSIILDKLPNLIGLHLAPNGFLQGAALT LFVSVCSIVVSVVLGFVTALARLSSSAVAFGIASFYASFFRGTPLLIQILLIYLGLPQLGIVPGAITAGVIALSLNYGAY LSEIFRAGIIGVSVGQREAALALALRPTQIFWRVTLPQAMRTIIPPTTNQFISMLKDSSLISVMGVWEVMFLAQSYGRSS YRYIEMLTTAAVLYWIMSIGLELLQSRLERHYGKAYQARK >Mature_279_residues TSFQPQRPPEQAEQAEQSLLKRVFGFRTRLYLTWLVMFVLFAGFFLSFDLKLSIILDKLPNLIGLHLAPNGFLQGAALTL FVSVCSIVVSVVLGFVTALARLSSSAVAFGIASFYASFFRGTPLLIQILLIYLGLPQLGIVPGAITAGVIALSLNYGAYL SEIFRAGIIGVSVGQREAALALALRPTQIFWRVTLPQAMRTIIPPTTNQFISMLKDSSLISVMGVWEVMFLAQSYGRSSY RYIEMLTTAAVLYWIMSIGLELLQSRLERHYGKAYQARK
Specific function: Part of a binding-protein-dependent transport system for arginine. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788226, Length=229, Percent_Identity=37.9912663755458, Blast_Score=146, Evalue=1e-36, Organism=Escherichia coli, GI1787030, Length=202, Percent_Identity=35.6435643564356, Blast_Score=120, Evalue=9e-29, Organism=Escherichia coli, GI1786873, Length=231, Percent_Identity=32.4675324675325, Blast_Score=101, Evalue=6e-23, Organism=Escherichia coli, GI1788646, Length=212, Percent_Identity=31.1320754716981, Blast_Score=101, Evalue=7e-23, Organism=Escherichia coli, GI1788645, Length=208, Percent_Identity=33.6538461538462, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1787087, Length=227, Percent_Identity=27.7533039647577, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI1786874, Length=242, Percent_Identity=26.0330578512397, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI87082239, Length=212, Percent_Identity=27.3584905660377, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI48994930, Length=127, Percent_Identity=35.4330708661417, Blast_Score=71, Evalue=6e-14, Organism=Escherichia coli, GI1787086, Length=218, Percent_Identity=28.4403669724771, Blast_Score=70, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 31004; Mature: 30873
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSFQPQRPPEQAEQAEQSLLKRVFGFRTRLYLTWLVMFVLFAGFFLSFDLKLSIILDKL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PNLIGLHLAPNGFLQGAALTLFVSVCSIVVSVVLGFVTALARLSSSAVAFGIASFYASFF HHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RGTPLLIQILLIYLGLPQLGIVPGAITAGVIALSLNYGAYLSEIFRAGIIGVSVGQREAA CCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHH LALALRPTQIFWRVTLPQAMRTIIPPTTNQFISMLKDSSLISVMGVWEVMFLAQSYGRSS HHHEECHHHHEEEEEHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCH YRYIEMLTTAAVLYWIMSIGLELLQSRLERHYGKAYQARK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TSFQPQRPPEQAEQAEQSLLKRVFGFRTRLYLTWLVMFVLFAGFFLSFDLKLSIILDKL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PNLIGLHLAPNGFLQGAALTLFVSVCSIVVSVVLGFVTALARLSSSAVAFGIASFYASFF HHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RGTPLLIQILLIYLGLPQLGIVPGAITAGVIALSLNYGAYLSEIFRAGIIGVSVGQREAA CCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHH LALALRPTQIFWRVTLPQAMRTIIPPTTNQFISMLKDSSLISVMGVWEVMFLAQSYGRSS HHHEECHHHHEEEEEHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCH YRYIEMLTTAAVLYWIMSIGLELLQSRLERHYGKAYQARK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]