| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is hemH [H]
Identifier: 66044220
GI number: 66044220
Start: 1100499
End: 1101521
Strand: Direct
Name: hemH [H]
Synonym: Psyr_0967
Alternate gene names: 66044220
Gene position: 1100499-1101521 (Clockwise)
Preceding gene: 66044219
Following gene: 66044223
Centisome position: 18.06
GC content: 59.73
Gene sequence:
>1023_bases ATGACCGATCACGCTTTGTTGCTGGTCAATCTGGGTTCGCCTGCCTCTACTCAAGTGGCAGACGTGCGCAGCTATCTGAA CCAGTTCCTGATGGATCCTTATGTGATCGACCTGCCGTGGCCAGTGCGCAGGCTGTTGGTCTCGCTGATTCTGATCAAAC GGCCAGAGCAGTCCGCACACGCCTATGCGTCCATCTGGTGGGATGAAGGTTCGCCTCTGGTGGTGCTGAGCAAGCGTCTG CAGCAGGCGATGAAAAAAGAGTGGTCGCACGGGCCGGTCGAGCTGGCCATGCGTTATGGCGAGCCGTCCATCGAAACCGT GCTGACGCGCCTGGCAGAGCAGGGCTTCAAGAAGGTCACCCTGGCGCCGCTGTATCCGCAGTTCGCCGACAGCACGGTGA CCACGGTCATTGAAGAAGCCAAACGTGTGGTGCGCGCCAAATCGTTGAAGATGCAGTTCTCGGTGCTGCAGCCGTTCTAC GATCAGCCCGAGTACCTGAGTGCGCTGGTGGAAAGCGTGCGGCCGCATCTGGAGCAGCCTTACGACCATTTGCTGCTGAG CTTTCACGGTCTTCCCGAGCGGCACCTGCACAAGCTCGACCCGACCGGCAAGCATTGCCTGAAGGACGACTGCTGCATGA CCGCCCCCGCCGAAGTGCTCGCCACCTGCTATCGCGCGCAGTGCATACAGTCGGCGGCGGCATTCGCCAAACGTATGGGC ATTGCTGACGGCAAATGGTCGGTGTCGTTCCAGTCACGTCTGGGGCGTGCCAAGTGGATCGAACCCTACACCGAAGCGCA TCTGGACGAACTGGCGGCGAAAGGTGTGAAGAAGCTGCTGGTCATGTGCCCGGCGTTCGTGGCTGATTGCATTGAAACGC TGGAAGAGATCGGTGATCGCGGTGCCGAGCAGTTCAAGGAAGCGGGGGGAGAGGAACTGATTCTGATCCCTTGCCTGAAC GACGACCCCAACTGGGCGAAAGAGTTGAACAGACTGTGCGAGCGTGCGCCGTTGATGTTGTAG
Upstream 100 bases:
>100_bases GCAGGAAGCTGGTTTTACATTCAAGTACACCGAACTCGACACCGCCCTGCAGGATTTGCTGGGTCGCCACTGAACGCTGT TGAAATGAATAGGATGTTGC
Downstream 100 bases:
>100_bases TGCTGCGAACGCCAGGGTGGTGGTGATCGTTCCTACGCTCCGCGTAGGAATGCATTTCGTGACGCTCCGCGTCACAAATC TGCGCTGCACCGCACATTCA
Product: ferrochelatase
Products: NA
Alternate protein names: Heme synthase; Protoheme ferro-lyase [H]
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MTDHALLLVNLGSPASTQVADVRSYLNQFLMDPYVIDLPWPVRRLLVSLILIKRPEQSAHAYASIWWDEGSPLVVLSKRL QQAMKKEWSHGPVELAMRYGEPSIETVLTRLAEQGFKKVTLAPLYPQFADSTVTTVIEEAKRVVRAKSLKMQFSVLQPFY DQPEYLSALVESVRPHLEQPYDHLLLSFHGLPERHLHKLDPTGKHCLKDDCCMTAPAEVLATCYRAQCIQSAAAFAKRMG IADGKWSVSFQSRLGRAKWIEPYTEAHLDELAAKGVKKLLVMCPAFVADCIETLEEIGDRGAEQFKEAGGEELILIPCLN DDPNWAKELNRLCERAPLML
Sequences:
>Translated_340_residues MTDHALLLVNLGSPASTQVADVRSYLNQFLMDPYVIDLPWPVRRLLVSLILIKRPEQSAHAYASIWWDEGSPLVVLSKRL QQAMKKEWSHGPVELAMRYGEPSIETVLTRLAEQGFKKVTLAPLYPQFADSTVTTVIEEAKRVVRAKSLKMQFSVLQPFY DQPEYLSALVESVRPHLEQPYDHLLLSFHGLPERHLHKLDPTGKHCLKDDCCMTAPAEVLATCYRAQCIQSAAAFAKRMG IADGKWSVSFQSRLGRAKWIEPYTEAHLDELAAKGVKKLLVMCPAFVADCIETLEEIGDRGAEQFKEAGGEELILIPCLN DDPNWAKELNRLCERAPLML >Mature_339_residues TDHALLLVNLGSPASTQVADVRSYLNQFLMDPYVIDLPWPVRRLLVSLILIKRPEQSAHAYASIWWDEGSPLVVLSKRLQ QAMKKEWSHGPVELAMRYGEPSIETVLTRLAEQGFKKVTLAPLYPQFADSTVTTVIEEAKRVVRAKSLKMQFSVLQPFYD QPEYLSALVESVRPHLEQPYDHLLLSFHGLPERHLHKLDPTGKHCLKDDCCMTAPAEVLATCYRAQCIQSAAAFAKRMGI ADGKWSVSFQSRLGRAKWIEPYTEAHLDELAAKGVKKLLVMCPAFVADCIETLEEIGDRGAEQFKEAGGEELILIPCLND DPNWAKELNRLCERAPLML
Specific function: Catalyzes the ferrous insertion into protoporphyrin IX [H]
COG id: COG0276
COG function: function code H; Protoheme ferro-lyase (ferrochelatase)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ferrochelatase family [H]
Homologues:
Organism=Escherichia coli, GI1786681, Length=328, Percent_Identity=37.8048780487805, Blast_Score=195, Evalue=4e-51, Organism=Saccharomyces cerevisiae, GI6324750, Length=321, Percent_Identity=25.2336448598131, Blast_Score=64, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001015 [H]
Pfam domain/function: PF00762 Ferrochelatase [H]
EC number: =4.99.1.1 [H]
Molecular weight: Translated: 38324; Mature: 38193
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDHALLLVNLGSPASTQVADVRSYLNQFLMDPYVIDLPWPVRRLLVSLILIKRPEQSAH CCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCCCHHHH AYASIWWDEGSPLVVLSKRLQQAMKKEWSHGPVELAMRYGEPSIETVLTRLAEQGFKKVT HEEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCEEE LAPLYPQFADSTVTTVIEEAKRVVRAKSLKMQFSVLQPFYDQPEYLSALVESVRPHLEQP ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC YDHLLLSFHGLPERHLHKLDPTGKHCLKDDCCMTAPAEVLATCYRAQCIQSAAAFAKRMG HHHHHHHHCCCCHHHHHCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC IADGKWSVSFQSRLGRAKWIEPYTEAHLDELAAKGVKKLLVMCPAFVADCIETLEEIGDR CCCCCEEEEHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GAEQFKEAGGEELILIPCLNDDPNWAKELNRLCERAPLML CHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure TDHALLLVNLGSPASTQVADVRSYLNQFLMDPYVIDLPWPVRRLLVSLILIKRPEQSAH CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCCCHHHH AYASIWWDEGSPLVVLSKRLQQAMKKEWSHGPVELAMRYGEPSIETVLTRLAEQGFKKVT HEEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCEEE LAPLYPQFADSTVTTVIEEAKRVVRAKSLKMQFSVLQPFYDQPEYLSALVESVRPHLEQP ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC YDHLLLSFHGLPERHLHKLDPTGKHCLKDDCCMTAPAEVLATCYRAQCIQSAAAFAKRMG HHHHHHHHCCCCHHHHHCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC IADGKWSVSFQSRLGRAKWIEPYTEAHLDELAAKGVKKLLVMCPAFVADCIETLEEIGDR CCCCCEEEEHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GAEQFKEAGGEELILIPCLNDDPNWAKELNRLCERAPLML CHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA