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The map label for this gene is yfcH [H]

Identifier: 66044219

GI number: 66044219

Start: 1099569

End: 1100471

Strand: Direct

Name: yfcH [H]

Synonym: Psyr_0966

Alternate gene names: 66044219

Gene position: 1099569-1100471 (Clockwise)

Preceding gene: 66044206

Following gene: 66044220

Centisome position: 18.04

GC content: 59.58

Gene sequence:

>903_bases
ATGCACATATTGCTGACCGGTGGTACTGGTTTGATAGGACGAGCGCTCTGCCGTTTCTGGTCTGCCCAAGGCCATGAATT
GACGGTATGGAGCCGAACACCCGCCGATGTCGTCGAGCTGTGCGGTCCCTCAGTGCGTGGCATTGCCAGCCTTGATGAGC
TGGGCACGCAGCCGGTGGATGCAATCATCAATCTGGCAGGCGCGCCCATTGCGGATCGTCCCTGGACCCGCAAGCGCCGT
CTGTTGCTGTGGGAGAGTCGCGTCGGCCTGACCGAGCAACTGCTGAAATGGCTGGGCACTCGCACGCAAAAACCTGCGCT
GATGATTTCCGGTTCCGCAGTCGGTTGGTACGGCGACAGTGGCGAGCGCGAAATCGACGAAACCTCGCTGCCTGCCAAGG
AAGACTTTGCCAGCCAGCTGTGCAATGCCTGGGAAGAAACCGCGCAACGTGCCGAGGCGCTGGGTGTGCGGGTGGTGCTG
ATACGCACGGGGCTGGTGCTGTCCGATCGTGCCGGTTTTCTGCAGCGTCTGTTGCCCCCTTTCAAATTCGGCATGGGCGG
GCCGATCGGTAACGGCAGGCAGTGGATGCCGTGGGTTCACATCCAGGATCAAATCGCCGCAATTGATTTTTTGTTAAATC
TGAATGAAGCAAAGGGTCCTTATAATGTTTGCGCGCCTTCACCGGTGCGCAATCGTCAGTTTGCCAGGACCCTGGCCGGC
ATTCTGCACCGACCGGCGTTCATGCCGATGCCTGCGCTGGCCCTGAAGGTATTGCTGGGTGAGCTTTCGGTATTGCTGCT
CGGTGGTCAGCGTGCGCGGCCGGAGCGTTTGCAGGAAGCTGGTTTTACATTCAAGTACACCGAACTCGACACCGCCCTGC
AGGATTTGCTGGGTCGCCACTGA

Upstream 100 bases:

>100_bases
TCAGCTGACAGTTTCGTTTTCCGGACCAACGTCACGGACAGCGTCACTGGTAAAAATAAGACTACTCAATTGTCACCTAC
GCCACGCGAGGTTATCTGCC

Downstream 100 bases:

>100_bases
ACGCTGTTGAAATGAATAGGATGTTGCATGACCGATCACGCTTTGTTGCTGGTCAATCTGGGTTCGCCTGCCTCTACTCA
AGTGGCAGACGTGCGCAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MHILLTGGTGLIGRALCRFWSAQGHELTVWSRTPADVVELCGPSVRGIASLDELGTQPVDAIINLAGAPIADRPWTRKRR
LLLWESRVGLTEQLLKWLGTRTQKPALMISGSAVGWYGDSGEREIDETSLPAKEDFASQLCNAWEETAQRAEALGVRVVL
IRTGLVLSDRAGFLQRLLPPFKFGMGGPIGNGRQWMPWVHIQDQIAAIDFLLNLNEAKGPYNVCAPSPVRNRQFARTLAG
ILHRPAFMPMPALALKVLLGELSVLLLGGQRARPERLQEAGFTFKYTELDTALQDLLGRH

Sequences:

>Translated_300_residues
MHILLTGGTGLIGRALCRFWSAQGHELTVWSRTPADVVELCGPSVRGIASLDELGTQPVDAIINLAGAPIADRPWTRKRR
LLLWESRVGLTEQLLKWLGTRTQKPALMISGSAVGWYGDSGEREIDETSLPAKEDFASQLCNAWEETAQRAEALGVRVVL
IRTGLVLSDRAGFLQRLLPPFKFGMGGPIGNGRQWMPWVHIQDQIAAIDFLLNLNEAKGPYNVCAPSPVRNRQFARTLAG
ILHRPAFMPMPALALKVLLGELSVLLLGGQRARPERLQEAGFTFKYTELDTALQDLLGRH
>Mature_300_residues
MHILLTGGTGLIGRALCRFWSAQGHELTVWSRTPADVVELCGPSVRGIASLDELGTQPVDAIINLAGAPIADRPWTRKRR
LLLWESRVGLTEQLLKWLGTRTQKPALMISGSAVGWYGDSGEREIDETSLPAKEDFASQLCNAWEETAQRAEALGVRVVL
IRTGLVLSDRAGFLQRLLPPFKFGMGGPIGNGRQWMPWVHIQDQIAAIDFLLNLNEAKGPYNVCAPSPVRNRQFARTLAG
ILHRPAFMPMPALALKVLLGELSVLLLGGQRARPERLQEAGFTFKYTELDTALQDLLGRH

Specific function: Unknown

COG id: COG1090

COG function: function code R; Predicted nucleoside-diphosphate sugar epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family. SDR39U1 subfamily [H]

Homologues:

Organism=Homo sapiens, GI116812630, Length=303, Percent_Identity=35.973597359736, Blast_Score=172, Evalue=4e-43,
Organism=Escherichia coli, GI1788642, Length=300, Percent_Identity=47.6666666666667, Blast_Score=278, Evalue=4e-76,
Organism=Drosophila melanogaster, GI28573846, Length=299, Percent_Identity=30.7692307692308, Blast_Score=157, Evalue=9e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013549
- InterPro:   IPR001509
- InterPro:   IPR016040
- InterPro:   IPR010099 [H]

Pfam domain/function: PF08338 DUF1731; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 33060; Mature: 33060

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHILLTGGTGLIGRALCRFWSAQGHELTVWSRTPADVVELCGPSVRGIASLDELGTQPVD
CEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHCCCCCHHHHHHHHHCCCHHH
AIINLAGAPIADRPWTRKRRLLLWESRVGLTEQLLKWLGTRTQKPALMISGSAVGWYGDS
HHHHHCCCCCCCCCCCHHHHEEEECCCCCHHHHHHHHHCCCCCCCEEEEECCEEEECCCC
GEREIDETSLPAKEDFASQLCNAWEETAQRAEALGVRVVLIRTGLVLSDRAGFLQRLLPP
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCHHHHHHHHCCH
FKFGMGGPIGNGRQWMPWVHIQDQIAAIDFLLNLNEAKGPYNVCAPSPVRNRQFARTLAG
HHCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH
ILHRPAFMPMPALALKVLLGELSVLLLGGQRARPERLQEAGFTFKYTELDTALQDLLGRH
HHHCCCCCCHHHHHHHHHHHHHHHEEECCCCCCHHHHHHCCCEEEEHHHHHHHHHHHCCC
>Mature Secondary Structure
MHILLTGGTGLIGRALCRFWSAQGHELTVWSRTPADVVELCGPSVRGIASLDELGTQPVD
CEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHCCCCCHHHHHHHHHCCCHHH
AIINLAGAPIADRPWTRKRRLLLWESRVGLTEQLLKWLGTRTQKPALMISGSAVGWYGDS
HHHHHCCCCCCCCCCCHHHHEEEECCCCCHHHHHHHHHCCCCCCCEEEEECCEEEECCCC
GEREIDETSLPAKEDFASQLCNAWEETAQRAEALGVRVVLIRTGLVLSDRAGFLQRLLPP
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCHHHHHHHHCCH
FKFGMGGPIGNGRQWMPWVHIQDQIAAIDFLLNLNEAKGPYNVCAPSPVRNRQFARTLAG
HHCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH
ILHRPAFMPMPALALKVLLGELSVLLLGGQRARPERLQEAGFTFKYTELDTALQDLLGRH
HHHCCCCCCHHHHHHHHHHHHHHHEEECCCCCCHHHHHHCCCEEEEHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]