| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66044193
Identifier: 66044193
GI number: 66044193
Start: 1074450
End: 1075661
Strand: Direct
Name: 66044193
Synonym: Psyr_0938
Alternate gene names: NA
Gene position: 1074450-1075661 (Clockwise)
Preceding gene: 66044192
Following gene: 66044201
Centisome position: 17.63
GC content: 46.45
Gene sequence:
>1212_bases ATGAGTATACAGTCGAGAAAACTGGTGACAGATCGAGCCGCACCAACTGAAGATTCACCCATCAGTTTTTACTGCAAGCT TGAAGACGACAATGCAGTTAAGGATTATTTGAGAGGTGGTCGTTGCCTGAGATTTACAGGCGTGAAGAGTTCTGAATGGA ATGAGGTATCTCTGCGTCAAGGCGTTGATGTCTATGTCATCGATGTTGATTTCTGGTCAACCAATAAAGGTAACGGGCTT TCCTTTATAGGTACCCACAAGCAATCATTGGTTGAACATCAGCCTGTCTTCGACTGGTTTCTTCTGGAGTTTACACCTGG GAAAGGGCGTAATTACTACTATTCCGCCTTTAGTGATCCCTCGGAAAACAAACCAACGTTTGGTAGCGTGCTGTTAGACC TCGACCCGAAAGCGGGGCCTGAACTGCCAACCCCGCCTAGCGTAAAGTCGATAAAAATGGATGCTGGCGACGATTACAGC TTTTACTCGTTTCACGTGGGGCAGGGTATGGCGTCGCTTCTTGATAATGAGCATGACGGCATACTGTTTGATGCCGGGGC TGGTTGCCCGATAAAACGACCGGACTATCCTGATCTGCTCGTAAACGATTTGAAAACCTCTGTTCAGGCTTTACACCGCG TCATCATGATCCTGTCTCACCCTGATCTCGACCACTGGCGGCTGTTGCAATGGGATCCGACGCTTTCGGGCGAAATAGAC AGCATTTATGTGCCGGTCAATACAAAGCAGCTGGTTTTTTCTGATAAAAGTGTAAACAAAAAAATCAAGGTTTTTGACGG TACACTTATTCCTTTGACGGTTGATTCTTCTCTCGATGTGCATCGTAGTAAACCCAGTTACTCTGACAAGAATGGCGAGT GCCTTGTGTGTGTTTTTCACACGCATGATCAGACGGTTCTTATCCCTGGTGACTACGTGTATGAGCGTATGAGACAAGAT ACGAACTCGCTTATCTCTGGCTTGGCAAATACTTCATACACCGCGATTATTGTCCCGCATCATGGCGACTTTGCCAGCAG CCTTGGTGTATTCACCGCACGTAATTCACAGTCGATTGCTTTTTTTTCGGCAGGTACCCATAAAGGATATAACCACCCTA CTGCAGCATCGTTGAGTGCCCACCACCGGTGGGGCTTTAAAGAAGTTTCAGATAAATACCAGTCTAATATTGTTAAGGTA AGGTTGTGTTGA
Upstream 100 bases:
>100_bases TAGATGTCTTCCGATACTTCAGCAGCGTTGCCTACATTTTGAATAAATCTGATAAATTTCGAAGGGTTTAGGAACGCAGT GATCAAAACAAGGGAGCTAC
Downstream 100 bases:
>100_bases GCTGATTGGGCCAAGTGAGTCAACGCTCTAGCGGTGTCGCTACCTTCCAGTTGGCAGGCATTCAACCTGCGAAAAGAATC CGCGTCTATCAAATAAGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 403; Mature: 402
Protein sequence:
>403_residues MSIQSRKLVTDRAAPTEDSPISFYCKLEDDNAVKDYLRGGRCLRFTGVKSSEWNEVSLRQGVDVYVIDVDFWSTNKGNGL SFIGTHKQSLVEHQPVFDWFLLEFTPGKGRNYYYSAFSDPSENKPTFGSVLLDLDPKAGPELPTPPSVKSIKMDAGDDYS FYSFHVGQGMASLLDNEHDGILFDAGAGCPIKRPDYPDLLVNDLKTSVQALHRVIMILSHPDLDHWRLLQWDPTLSGEID SIYVPVNTKQLVFSDKSVNKKIKVFDGTLIPLTVDSSLDVHRSKPSYSDKNGECLVCVFHTHDQTVLIPGDYVYERMRQD TNSLISGLANTSYTAIIVPHHGDFASSLGVFTARNSQSIAFFSAGTHKGYNHPTAASLSAHHRWGFKEVSDKYQSNIVKV RLC
Sequences:
>Translated_403_residues MSIQSRKLVTDRAAPTEDSPISFYCKLEDDNAVKDYLRGGRCLRFTGVKSSEWNEVSLRQGVDVYVIDVDFWSTNKGNGL SFIGTHKQSLVEHQPVFDWFLLEFTPGKGRNYYYSAFSDPSENKPTFGSVLLDLDPKAGPELPTPPSVKSIKMDAGDDYS FYSFHVGQGMASLLDNEHDGILFDAGAGCPIKRPDYPDLLVNDLKTSVQALHRVIMILSHPDLDHWRLLQWDPTLSGEID SIYVPVNTKQLVFSDKSVNKKIKVFDGTLIPLTVDSSLDVHRSKPSYSDKNGECLVCVFHTHDQTVLIPGDYVYERMRQD TNSLISGLANTSYTAIIVPHHGDFASSLGVFTARNSQSIAFFSAGTHKGYNHPTAASLSAHHRWGFKEVSDKYQSNIVKV RLC >Mature_402_residues SIQSRKLVTDRAAPTEDSPISFYCKLEDDNAVKDYLRGGRCLRFTGVKSSEWNEVSLRQGVDVYVIDVDFWSTNKGNGLS FIGTHKQSLVEHQPVFDWFLLEFTPGKGRNYYYSAFSDPSENKPTFGSVLLDLDPKAGPELPTPPSVKSIKMDAGDDYSF YSFHVGQGMASLLDNEHDGILFDAGAGCPIKRPDYPDLLVNDLKTSVQALHRVIMILSHPDLDHWRLLQWDPTLSGEIDS IYVPVNTKQLVFSDKSVNKKIKVFDGTLIPLTVDSSLDVHRSKPSYSDKNGECLVCVFHTHDQTVLIPGDYVYERMRQDT NSLISGLANTSYTAIIVPHHGDFASSLGVFTARNSQSIAFFSAGTHKGYNHPTAASLSAHHRWGFKEVSDKYQSNIVKVR LC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45008; Mature: 44877
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIQSRKLVTDRAAPTEDSPISFYCKLEDDNAVKDYLRGGRCLRFTGVKSSEWNEVSLRQ CCCCCCEEEECCCCCCCCCCEEEEEEECCCCHHHHHHCCCCEEEEECCCCCCCCEEHHHC GVDVYVIDVDFWSTNKGNGLSFIGTHKQSLVEHQPVFDWFLLEFTPGKGRNYYYSAFSDP CCEEEEEEEEEECCCCCCCEEEEECCHHHHHHCCCCEEEEEEEEECCCCCCEEEEECCCC SENKPTFGSVLLDLDPKAGPELPTPPSVKSIKMDAGDDYSFYSFHVGQGMASLLDNEHDG CCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCHHHHHCCCCCC ILFDAGAGCPIKRPDYPDLLVNDLKTSVQALHRVIMILSHPDLDHWRLLQWDPTLSGEID EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEEEEECCCCCCCCC SIYVPVNTKQLVFSDKSVNKKIKVFDGTLIPLTVDSSLDVHRSKPSYSDKNGECLVCVFH EEEEECCCCEEEEECCCCCCEEEEECCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEE THDQTVLIPGDYVYERMRQDTNSLISGLANTSYTAIIVPHHGDFASSLGVFTARNSQSIA CCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHCCEEEECCCCEEE FFSAGTHKGYNHPTAASLSAHHRWGFKEVSDKYQSNIVKVRLC EEECCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHCCEEEEEEC >Mature Secondary Structure SIQSRKLVTDRAAPTEDSPISFYCKLEDDNAVKDYLRGGRCLRFTGVKSSEWNEVSLRQ CCCCCEEEECCCCCCCCCCEEEEEEECCCCHHHHHHCCCCEEEEECCCCCCCCEEHHHC GVDVYVIDVDFWSTNKGNGLSFIGTHKQSLVEHQPVFDWFLLEFTPGKGRNYYYSAFSDP CCEEEEEEEEEECCCCCCCEEEEECCHHHHHHCCCCEEEEEEEEECCCCCCEEEEECCCC SENKPTFGSVLLDLDPKAGPELPTPPSVKSIKMDAGDDYSFYSFHVGQGMASLLDNEHDG CCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCHHHHHCCCCCC ILFDAGAGCPIKRPDYPDLLVNDLKTSVQALHRVIMILSHPDLDHWRLLQWDPTLSGEID EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEEEEECCCCCCCCC SIYVPVNTKQLVFSDKSVNKKIKVFDGTLIPLTVDSSLDVHRSKPSYSDKNGECLVCVFH EEEEECCCCEEEEECCCCCCEEEEECCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEE THDQTVLIPGDYVYERMRQDTNSLISGLANTSYTAIIVPHHGDFASSLGVFTARNSQSIA CCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHCCEEEECCCCEEE FFSAGTHKGYNHPTAASLSAHHRWGFKEVSDKYQSNIVKVRLC EEECCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA