| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66044176
Identifier: 66044176
GI number: 66044176
Start: 1048744
End: 1049232
Strand: Direct
Name: 66044176
Synonym: Psyr_0921
Alternate gene names: NA
Gene position: 1048744-1049232 (Clockwise)
Preceding gene: 66044175
Following gene: 66044177
Centisome position: 17.21
GC content: 46.42
Gene sequence:
>489_bases ATGGTAGTGAGCAGCGTGATACCTACATTAATACGAAGAATCGCCAACCTCGTTTACAGACTTACTCGAGGGATATTTCC CTTATCACTCATCTCCTTCCTGATCGTCGGATCGCTTGGCGTTCTGGTACACATGAGCATTCTCAAGACACTCATGCTGA CCTCGACGGACAGCTTCCGGTATGCCAACGCAGGCGCGATGATCGTTGCTGCCAGTTTCAATTATCTGATGAACAATAAG TCGACTTATCGTGAGACAAGTCTGGCAGGCAAGCGAATCATTGCCGGGTATTTGATCTATCTGACGATCACTTCTCTTGG GCTGGGTTTGAGCCTGCTGATTTCTGGAGAAGTTTACGACCGGATACAAATGCCTATGATTTCCGCGCTGTGTGGCATCG TGGTCGGTTCGCTCTGGAATTATTTTATGTCCTATAACTTCGTTTGGAAAATGCTGTCTCCAAAACCCAAACCAATTGAA CAGAATTAA
Upstream 100 bases:
>100_bases ATGTTGCTTGCTTAAAGACGCTAAAAACTCTATCCTCCGCGTCTATTTTTGGGCGATTTCTGCGCGTTAATCAGCGCTTG TCAGCGTCAAAACCTTCAAT
Downstream 100 bases:
>100_bases GCAAAAATAATGAAAAAATTGATTTTTTTTGCCACCTATAACGAGGCAGGCAACGTAACGTCCATGATCGAGCGGATCAC CGCTGCCGCACCCGATGCGG
Product: GtrA-like protein
Products: NA
Alternate protein names: Dolichyl-Phosphate Beta-D-Mannosyltransferase
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MVVSSVIPTLIRRIANLVYRLTRGIFPLSLISFLIVGSLGVLVHMSILKTLMLTSTDSFRYANAGAMIVAASFNYLMNNK STYRETSLAGKRIIAGYLIYLTITSLGLGLSLLISGEVYDRIQMPMISALCGIVVGSLWNYFMSYNFVWKMLSPKPKPIE QN
Sequences:
>Translated_162_residues MVVSSVIPTLIRRIANLVYRLTRGIFPLSLISFLIVGSLGVLVHMSILKTLMLTSTDSFRYANAGAMIVAASFNYLMNNK STYRETSLAGKRIIAGYLIYLTITSLGLGLSLLISGEVYDRIQMPMISALCGIVVGSLWNYFMSYNFVWKMLSPKPKPIE QN >Mature_162_residues MVVSSVIPTLIRRIANLVYRLTRGIFPLSLISFLIVGSLGVLVHMSILKTLMLTSTDSFRYANAGAMIVAASFNYLMNNK STYRETSLAGKRIIAGYLIYLTITSLGLGLSLLISGEVYDRIQMPMISALCGIVVGSLWNYFMSYNFVWKMLSPKPKPIE QN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18012; Mature: 18012
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVSSVIPTLIRRIANLVYRLTRGIFPLSLISFLIVGSLGVLVHMSILKTLMLTSTDSFR CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE YANAGAMIVAASFNYLMNNKSTYRETSLAGKRIIAGYLIYLTITSLGLGLSLLISGEVYD ECCCCCEEEEEHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHH RIQMPMISALCGIVVGSLWNYFMSYNFVWKMLSPKPKPIEQN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MVVSSVIPTLIRRIANLVYRLTRGIFPLSLISFLIVGSLGVLVHMSILKTLMLTSTDSFR CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE YANAGAMIVAASFNYLMNNKSTYRETSLAGKRIIAGYLIYLTITSLGLGLSLLISGEVYD ECCCCCEEEEEHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHH RIQMPMISALCGIVVGSLWNYFMSYNFVWKMLSPKPKPIEQN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA