| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66044175
Identifier: 66044175
GI number: 66044175
Start: 1045977
End: 1048472
Strand: Direct
Name: 66044175
Synonym: Psyr_0920
Alternate gene names: NA
Gene position: 1045977-1048472 (Clockwise)
Preceding gene: 66044174
Following gene: 66044176
Centisome position: 17.16
GC content: 52.84
Gene sequence:
>2496_bases ATGCGTATTGTCATTGATCTACAGGGCGCTCAGTCCGAAAGTCGTTTTCGCGGTATTGGTCGCTATTCTCTGTCATTGGC TCAGGCCATCGCACGAAATGCCGGGAGCCATGAGATATGGCTAGCCCTGAACAACTGCATGTCGGAAAGCATTCCTGACA TAAGGGCTGCCTTTGCTGGTCTTATTCCTGAGAGCCGCATACGTATATTTGACGTGCCGGGTGATGCGAACCCGACTCCT TGGGTGGCGAGAGCATCTGAAGTCATCAGAGAGTCCTTTTTGTCCACGTTGAAACCCGATGCGGTAGTGGTCAGCAGTCT GTTTGAAGGCTATTGGGCGAACGCAGTGACGTCCGTTGGGGCTGTGCCGGCAACGCATCAAACCGCAGTAATCCTCTATG ACCTGATTCCGTTCATGAACGAGGATGTCTATCTTCCTACTGCAGAGCTGAAAGACTATTACCACCGTAAAATAGACTGG TTGAAGAAAGCCGATACTTTGCTGGCCATTTCCGATTCCTCGCGTCAGGAAGCGGTGACTCACCTAGGCATTGACCAAGC AAAGATAGCCAATATTTCTGCGGCTATTGGTGAGCAGTTTATTCCCGATGATGTGAATCTGAGCAAGAGTTCGGCGATAC TTGAGCGTCTGGGCGTGAAAAGCGAGTTCATTCTTTATGCGCCGGGCGGCTTCGACCCCAGGAAGAATTTCGCTCGCTTG CTTGAAGCCTATAGCACGTTGCCCAGCGCGCTTAAGGCCAGGCACCAGTTGGTAATCGCAAGCAAGCTGCATGCTCAGCA GCGAATGGAGCTGCTCGCCTTCGCAGAGCAATATGGCGTCAAGGCTTCGGAGTTGGTACTGACTGGCTACGTCAATGATG CAGACCTGATTGCCCTCTACTCTTTGACCAAGCTATTTGTCTTCCCGTCGACCCATGAAGGCTTTGGTCTTCCGGTGCTG GAAGCCATGGCATGTGGCGCTGCGGTTATCGGTTCTAACTGCAGCAGTGTTCCGGAAGTCATAGGGTTCGACGAAGCGCT GTTCGACCCGTTCTCGGTCGGCTCCATCGCTGCGAAAATGCTAGAAGGTCTAGAAAGCGATGGCTTCCGCTCAAGATTGC TTACCAATGCAGGGGAGCAGTGCAAGAAGTTTTCGTGGGATGAGTCTGCGAAAAAAGCCATAGAAGCTTTGGAGTCGAGG CATTCGTCGGTTGCTGCTGATCAGCCTGACCTGCCTGATCCTGGAGCTGCATTGCTGGAGCGACTGATTTCACTCTCGGA CACTGCGCCTACTGACATCGAGCTTTTTCAGGTTGCGAAAAGTATCGCATTCGACTTTGCAGGTGCTGATCACAGGCAGT TGTTGCTTGATGTATCCAGCATCGTTCACAGTGATGCCAAATCAGGTATTCAACGCGTCGTACGCAGTCTGCTCCACGAG TTCTTGAATGACCAACCAGCAGGCCTGACTGTTCGTCCGATCTACTTCGCGGATGGCCAGTATTATTATGCTAATGCCTT TGCCTCCCGCATCTATGATCAGTTTTCCGAAACGACAGATGCAATTATCGACTTCGCCCAAGACGACATCTATCTGTCTC TGGACTTGAACATGCACTTGGCCAGTCAGCTCTATCCGCTGCACAGTCAGATGCGGCAGATGGGCGTACAGGTCAGTTAC ATCGTGTACGACTTGCTGCTGTTCCACCGCCCTGACTGGTGGGTGGCGCCGAATGCTGAGCTGTTCAACGACTGGCTGCA GAAAATCAGCATGGTCGCCAGTAGCCTGATTTGCATATCGGGTGCAGTTGCGGATGAATTGAAGCAGTGGCTTGCTGACA ATGTGGACAAGTGCGCAGGCAACAAGCCAAGTGTAAAAAGCTTCCACTTGGGGGCCGATATCGATAACAGCCTGCCTTCT GCGGGTCTGCCCGATGATGCAGGGGAGCTGTTGGCACGTCTGGCGCAGAAGCCAAGCTTCCTGATGGTCAGTACCGTAGA GCCGCGCAAAGGGCATGCGCAAACGCTCTCTGCTTTTGAAAGTCTCTGGGAGCAGGGGCAGGACATTAATCTTGTCATCG TCGGGAAACGGGGCTGGCTTGTGGACGAGCTGGTCGCACGCCTTGAAAACCATCCCGAGAAAGGCAACAGGCTTTTCTGG CTGGAAGGCATCAGTGATGAGTACCTCGAAAAGATTTACTCGGCATCTACCTGCTTGATCGCAGCATCCGAGGGCGAGGG GTTTGGCTTGCCACTGATTGAAGCTGCTCAGTACGGGCTGCCGATGATCGTTCGTGATCTGCCGGTTTTCAGAGAGATCG CACTTGATCATGCGTTCTACTTTAGCGGTATGAACGATTCTGATATCAGCGCCGCGATCACGGCGTGGCTTGACCTTCAC AAAGACGACAAGCATCCGGGCTCCGGTGACATGCCTTGGCTGACTTGGGAGCAAAGTGCTGCGCAACTGAAAAAAGCACT GATGTTCAGCGTTTAG
Upstream 100 bases:
>100_bases CAACAGAGGCGACTGACGATGGTTTTCCGACAGCAAGCCCAAGGGTGGCGCGTGTTTATTCCGATTTGAAGCTGGCTTTT GAGCGCAAGGAAAACCGTTA
Downstream 100 bases:
>100_bases TACCCGTCCTGGAAAATACTGCCATACAGCCGATTTGAACCTGGGCGCCGCATCGCGCCCAGGACTGAGCCGCTTTCGGG GGCCAATGGCTGGTGCTGCA
Product: glycosyl transferase, group 1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 831; Mature: 831
Protein sequence:
>831_residues MRIVIDLQGAQSESRFRGIGRYSLSLAQAIARNAGSHEIWLALNNCMSESIPDIRAAFAGLIPESRIRIFDVPGDANPTP WVARASEVIRESFLSTLKPDAVVVSSLFEGYWANAVTSVGAVPATHQTAVILYDLIPFMNEDVYLPTAELKDYYHRKIDW LKKADTLLAISDSSRQEAVTHLGIDQAKIANISAAIGEQFIPDDVNLSKSSAILERLGVKSEFILYAPGGFDPRKNFARL LEAYSTLPSALKARHQLVIASKLHAQQRMELLAFAEQYGVKASELVLTGYVNDADLIALYSLTKLFVFPSTHEGFGLPVL EAMACGAAVIGSNCSSVPEVIGFDEALFDPFSVGSIAAKMLEGLESDGFRSRLLTNAGEQCKKFSWDESAKKAIEALESR HSSVAADQPDLPDPGAALLERLISLSDTAPTDIELFQVAKSIAFDFAGADHRQLLLDVSSIVHSDAKSGIQRVVRSLLHE FLNDQPAGLTVRPIYFADGQYYYANAFASRIYDQFSETTDAIIDFAQDDIYLSLDLNMHLASQLYPLHSQMRQMGVQVSY IVYDLLLFHRPDWWVAPNAELFNDWLQKISMVASSLICISGAVADELKQWLADNVDKCAGNKPSVKSFHLGADIDNSLPS AGLPDDAGELLARLAQKPSFLMVSTVEPRKGHAQTLSAFESLWEQGQDINLVIVGKRGWLVDELVARLENHPEKGNRLFW LEGISDEYLEKIYSASTCLIAASEGEGFGLPLIEAAQYGLPMIVRDLPVFREIALDHAFYFSGMNDSDISAAITAWLDLH KDDKHPGSGDMPWLTWEQSAAQLKKALMFSV
Sequences:
>Translated_831_residues MRIVIDLQGAQSESRFRGIGRYSLSLAQAIARNAGSHEIWLALNNCMSESIPDIRAAFAGLIPESRIRIFDVPGDANPTP WVARASEVIRESFLSTLKPDAVVVSSLFEGYWANAVTSVGAVPATHQTAVILYDLIPFMNEDVYLPTAELKDYYHRKIDW LKKADTLLAISDSSRQEAVTHLGIDQAKIANISAAIGEQFIPDDVNLSKSSAILERLGVKSEFILYAPGGFDPRKNFARL LEAYSTLPSALKARHQLVIASKLHAQQRMELLAFAEQYGVKASELVLTGYVNDADLIALYSLTKLFVFPSTHEGFGLPVL EAMACGAAVIGSNCSSVPEVIGFDEALFDPFSVGSIAAKMLEGLESDGFRSRLLTNAGEQCKKFSWDESAKKAIEALESR HSSVAADQPDLPDPGAALLERLISLSDTAPTDIELFQVAKSIAFDFAGADHRQLLLDVSSIVHSDAKSGIQRVVRSLLHE FLNDQPAGLTVRPIYFADGQYYYANAFASRIYDQFSETTDAIIDFAQDDIYLSLDLNMHLASQLYPLHSQMRQMGVQVSY IVYDLLLFHRPDWWVAPNAELFNDWLQKISMVASSLICISGAVADELKQWLADNVDKCAGNKPSVKSFHLGADIDNSLPS AGLPDDAGELLARLAQKPSFLMVSTVEPRKGHAQTLSAFESLWEQGQDINLVIVGKRGWLVDELVARLENHPEKGNRLFW LEGISDEYLEKIYSASTCLIAASEGEGFGLPLIEAAQYGLPMIVRDLPVFREIALDHAFYFSGMNDSDISAAITAWLDLH KDDKHPGSGDMPWLTWEQSAAQLKKALMFSV >Mature_831_residues MRIVIDLQGAQSESRFRGIGRYSLSLAQAIARNAGSHEIWLALNNCMSESIPDIRAAFAGLIPESRIRIFDVPGDANPTP WVARASEVIRESFLSTLKPDAVVVSSLFEGYWANAVTSVGAVPATHQTAVILYDLIPFMNEDVYLPTAELKDYYHRKIDW LKKADTLLAISDSSRQEAVTHLGIDQAKIANISAAIGEQFIPDDVNLSKSSAILERLGVKSEFILYAPGGFDPRKNFARL LEAYSTLPSALKARHQLVIASKLHAQQRMELLAFAEQYGVKASELVLTGYVNDADLIALYSLTKLFVFPSTHEGFGLPVL EAMACGAAVIGSNCSSVPEVIGFDEALFDPFSVGSIAAKMLEGLESDGFRSRLLTNAGEQCKKFSWDESAKKAIEALESR HSSVAADQPDLPDPGAALLERLISLSDTAPTDIELFQVAKSIAFDFAGADHRQLLLDVSSIVHSDAKSGIQRVVRSLLHE FLNDQPAGLTVRPIYFADGQYYYANAFASRIYDQFSETTDAIIDFAQDDIYLSLDLNMHLASQLYPLHSQMRQMGVQVSY IVYDLLLFHRPDWWVAPNAELFNDWLQKISMVASSLICISGAVADELKQWLADNVDKCAGNKPSVKSFHLGADIDNSLPS AGLPDDAGELLARLAQKPSFLMVSTVEPRKGHAQTLSAFESLWEQGQDINLVIVGKRGWLVDELVARLENHPEKGNRLFW LEGISDEYLEKIYSASTCLIAASEGEGFGLPLIEAAQYGLPMIVRDLPVFREIALDHAFYFSGMNDSDISAAITAWLDLH KDDKHPGSGDMPWLTWEQSAAQLKKALMFSV
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 - InterPro: IPR013534 [H]
Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]
EC number: NA
Molecular weight: Translated: 91463; Mature: 91463
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: PS01037 SBP_BACTERIAL_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIVIDLQGAQSESRFRGIGRYSLSLAQAIARNAGSHEIWLALNNCMSESIPDIRAAFAG CEEEEEECCCCCHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEEHHHHHHCCCHHHHHHHH LIPESRIRIFDVPGDANPTPWVARASEVIRESFLSTLKPDAVVVSSLFEGYWANAVTSVG CCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC AVPATHQTAVILYDLIPFMNEDVYLPTAELKDYYHRKIDWLKKADTLLAISDSSRQEAVT CCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHH HLGIDQAKIANISAAIGEQFIPDDVNLSKSSAILERLGVKSEFILYAPGGFDPRKNFARL HCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHH LEAYSTLPSALKARHQLVIASKLHAQQRMELLAFAEQYGVKASELVLTGYVNDADLIALY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEECCCHHHHHHH SLTKLFVFPSTHEGFGLPVLEAMACGAAVIGSNCSSVPEVIGFDEALFDPFSVGSIAAKM HHHHHHEECCCCCCCCCHHHHHHHHCHHHHCCCCCCCHHHHCCCHHHCCCCHHHHHHHHH LEGLESDGFRSRLLTNAGEQCKKFSWDESAKKAIEALESRHSSVAADQPDLPDPGAALLE HHCCCCCCHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH RLISLSDTAPTDIELFQVAKSIAFDFAGADHRQLLLDVSSIVHSDAKSGIQRVVRSLLHE HHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLNDQPAGLTVRPIYFADGQYYYANAFASRIYDQFSETTDAIIDFAQDDIYLSLDLNMHL HHCCCCCCEEEEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHH ASQLYPLHSQMRQMGVQVSYIVYDLLLFHRPDWWVAPNAELFNDWLQKISMVASSLICIS HHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH GAVADELKQWLADNVDKCAGNKPSVKSFHLGADIDNSLPSAGLPDDAGELLARLAQKPSF HHHHHHHHHHHHCCHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCE LMVSTVEPRKGHAQTLSAFESLWEQGQDINLVIVGKRGWLVDELVARLENHPEKGNRLFW EEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCEEEE LEGISDEYLEKIYSASTCLIAASEGEGFGLPLIEAAQYGLPMIVRDLPVFREIALDHAFY EECCCHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHH FSGMNDSDISAAITAWLDLHKDDKHPGSGDMPWLTWEQSAAQLKKALMFSV CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHCC >Mature Secondary Structure MRIVIDLQGAQSESRFRGIGRYSLSLAQAIARNAGSHEIWLALNNCMSESIPDIRAAFAG CEEEEEECCCCCHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEEHHHHHHCCCHHHHHHHH LIPESRIRIFDVPGDANPTPWVARASEVIRESFLSTLKPDAVVVSSLFEGYWANAVTSVG CCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC AVPATHQTAVILYDLIPFMNEDVYLPTAELKDYYHRKIDWLKKADTLLAISDSSRQEAVT CCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHH HLGIDQAKIANISAAIGEQFIPDDVNLSKSSAILERLGVKSEFILYAPGGFDPRKNFARL HCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHH LEAYSTLPSALKARHQLVIASKLHAQQRMELLAFAEQYGVKASELVLTGYVNDADLIALY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEECCCHHHHHHH SLTKLFVFPSTHEGFGLPVLEAMACGAAVIGSNCSSVPEVIGFDEALFDPFSVGSIAAKM HHHHHHEECCCCCCCCCHHHHHHHHCHHHHCCCCCCCHHHHCCCHHHCCCCHHHHHHHHH LEGLESDGFRSRLLTNAGEQCKKFSWDESAKKAIEALESRHSSVAADQPDLPDPGAALLE HHCCCCCCHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH RLISLSDTAPTDIELFQVAKSIAFDFAGADHRQLLLDVSSIVHSDAKSGIQRVVRSLLHE HHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLNDQPAGLTVRPIYFADGQYYYANAFASRIYDQFSETTDAIIDFAQDDIYLSLDLNMHL HHCCCCCCEEEEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHH ASQLYPLHSQMRQMGVQVSYIVYDLLLFHRPDWWVAPNAELFNDWLQKISMVASSLICIS HHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH GAVADELKQWLADNVDKCAGNKPSVKSFHLGADIDNSLPSAGLPDDAGELLARLAQKPSF HHHHHHHHHHHHCCHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCE LMVSTVEPRKGHAQTLSAFESLWEQGQDINLVIVGKRGWLVDELVARLENHPEKGNRLFW EEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCEEEE LEGISDEYLEKIYSASTCLIAASEGEGFGLPLIEAAQYGLPMIVRDLPVFREIALDHAFY EECCCHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHH FSGMNDSDISAAITAWLDLHKDDKHPGSGDMPWLTWEQSAAQLKKALMFSV CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]