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The map label for this gene is ybfF [C]

Identifier: 66044177

GI number: 66044177

Start: 1049242

End: 1050096

Strand: Direct

Name: ybfF [C]

Synonym: Psyr_0922

Alternate gene names: 66044177

Gene position: 1049242-1050096 (Clockwise)

Preceding gene: 66044176

Following gene: 66044178

Centisome position: 17.22

GC content: 52.4

Gene sequence:

>855_bases
ATGAAAAAATTGATTTTTTTTGCCACCTATAACGAGGCAGGCAACGTAACGTCCATGATCGAGCGGATCACCGCTGCCGC
ACCCGATGCGGACATCCTCGTGGTCGATGACAGCAGCAAGGATGGCACCCTCGATATTCTGGCCACCTTGGCCAGACCAA
GCCTGAAAGTGATCGTACGTCCAGGAAAACTAGGGTTGGGTACTGCCCACCTTCTGGCATGGAAGTATGCGATTTTTCAT
TCATACGACATTCTTGTCACCATGGATGGCGACCACTCCCACGATCCAGCCGACATCCCGAAGCTGATTGGCGCTCTGGA
TGCCACGACTGACCTTGTCATCGGCTCTCGTTACGCTGAAGGTGGAAAGTGTGATTACACAGGTTATCGTCTGCGTGTCA
GTCAGGCAGCAAACAAAGCCGCCAGGCTGTTGCTGGGCATCAAACTGACCGAGTTTACTACCTCTTTTCGCGCGTTTCGC
GTCAGCCGGTTGAATGCAATCGACTTCGACACGCTGGTCGTGGGTGGCTACTCATTCTTCCTCGCGGTGATTGTTCAGGC
TTATCGACATGGCCTGAAGCTATCCGAGCGTCCAATCCATTTCCATGAGCGCAATGCAGGTGTGTCGAAGATCCCTCCAC
TGGAGATCTTCCGCGGTATCGCTAATTTGCTCAGGCTGACGGCAATCAGTCATTTCACCAAAGTTTCTCCTGCTGTGAGC
AACGTGATAATGAAATGCGAAAAATGCCAATGTGAATTCTCGTTGATCAAAGCCGATCAGCCGGGTGCAACAGGCACCAA
GGACGAAGTGTGTCTGAGCTGTGGGAATCGTCAGATCGGTGCGAAAGGCGCATGA

Upstream 100 bases:

>100_bases
CGTGGTCGGTTCGCTCTGGAATTATTTTATGTCCTATAACTTCGTTTGGAAAATGCTGTCTCCAAAACCCAAACCAATTG
AACAGAATTAAGCAAAAATA

Downstream 100 bases:

>100_bases
CGGTCGTATCAACCAGCGATAATCGTAGCCAGCTACTGCTAGGCGTTCTGCTTATTATTCTGTCGGGGATTGTTGCGGGT
GCGGTACTCCCGCTAACCCA

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: Glycosyl Transferase; Dolichol-Phosphate Mannosyltransferase; Glycosyl Transferase Family Protein; Glycosyltransferase; Glycosyl Transferase Group 2 Family Protein; Apolipo; Apolipoprotein N-Acyltransferase; Family 2 Glycosyl Transferase; Dolichol-Phosphate Mannosyltransferase Family Protein; Glycosyl Transferase Family 2 Protein; Dolichyl-Phosphate Mannose Synthase; Polyprenol-Phosphate Mannosyltransferase; Polyprenol Phosphate Mannosyl Transferase; Glycosyltransferase Involved In Cell Wall Biogenesis; Polyprenol-Phosphate-Mannose Synthase; Dolichol Monophosphate Mannose Synthase; Cell Wall Biosynthesis Glycosyltransferase; Glycosyl Transferase GT2 Family Protein; Polyprenyl-Phosphate Beta-D-Mannosyltransferase; Glycosyltransferase Family Beta-Glycosyltransferase; Group Glycosyltransferase; Family 2 Glycosyltransferase; Family 2 Glycosyl Transferase Protein; B-Glycosyltransferase; Cell Wall Biogenesis Glycosyltransferase; Group 2 Family Glycosyltransferase; Dolichyl-Phosphate-Mannose Synthase; Group 2 Family Glycosyl Transferase; Prenol Monophospho-Mannose Synthase; Glycosyl Transferase Group 2 Family; Monosaccharide Translocase; Polyprenol-Monophosphomannose Synthase Ppm1B; Polyprenol-Monophosphomannose Synthase

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MKKLIFFATYNEAGNVTSMIERITAAAPDADILVVDDSSKDGTLDILATLARPSLKVIVRPGKLGLGTAHLLAWKYAIFH
SYDILVTMDGDHSHDPADIPKLIGALDATTDLVIGSRYAEGGKCDYTGYRLRVSQAANKAARLLLGIKLTEFTTSFRAFR
VSRLNAIDFDTLVVGGYSFFLAVIVQAYRHGLKLSERPIHFHERNAGVSKIPPLEIFRGIANLLRLTAISHFTKVSPAVS
NVIMKCEKCQCEFSLIKADQPGATGTKDEVCLSCGNRQIGAKGA

Sequences:

>Translated_284_residues
MKKLIFFATYNEAGNVTSMIERITAAAPDADILVVDDSSKDGTLDILATLARPSLKVIVRPGKLGLGTAHLLAWKYAIFH
SYDILVTMDGDHSHDPADIPKLIGALDATTDLVIGSRYAEGGKCDYTGYRLRVSQAANKAARLLLGIKLTEFTTSFRAFR
VSRLNAIDFDTLVVGGYSFFLAVIVQAYRHGLKLSERPIHFHERNAGVSKIPPLEIFRGIANLLRLTAISHFTKVSPAVS
NVIMKCEKCQCEFSLIKADQPGATGTKDEVCLSCGNRQIGAKGA
>Mature_284_residues
MKKLIFFATYNEAGNVTSMIERITAAAPDADILVVDDSSKDGTLDILATLARPSLKVIVRPGKLGLGTAHLLAWKYAIFH
SYDILVTMDGDHSHDPADIPKLIGALDATTDLVIGSRYAEGGKCDYTGYRLRVSQAANKAARLLLGIKLTEFTTSFRAFR
VSRLNAIDFDTLVVGGYSFFLAVIVQAYRHGLKLSERPIHFHERNAGVSKIPPLEIFRGIANLLRLTAISHFTKVSPAVS
NVIMKCEKCQCEFSLIKADQPGATGTKDEVCLSCGNRQIGAKGA

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI4503363, Length=236, Percent_Identity=32.2033898305085, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI71999402, Length=234, Percent_Identity=32.9059829059829, Blast_Score=100, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24585265, Length=239, Percent_Identity=35.1464435146443, Blast_Score=113, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30872; Mature: 30872

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLIFFATYNEAGNVTSMIERITAAAPDADILVVDDSSKDGTLDILATLARPSLKVIVR
CCEEEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHCCCCEEEEEE
PGKLGLGTAHLLAWKYAIFHSYDILVTMDGDHSHDPADIPKLIGALDATTDLVIGSRYAE
CCCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHCCHHHHEEECCCCC
GGKCDYTGYRLRVSQAANKAARLLLGIKLTEFTTSFRAFRVSRLNAIDFDTLVVGGYSFF
CCCCCCCCEEEEEHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHCCCCCCHHEEECHHHHH
LAVIVQAYRHGLKLSERPIHFHERNAGVSKIPPLEIFRGIANLLRLTAISHFTKVSPAVS
HHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHH
NVIMKCEKCQCEFSLIKADQPGATGTKDEVCLSCGNRQIGAKGA
HHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKKLIFFATYNEAGNVTSMIERITAAAPDADILVVDDSSKDGTLDILATLARPSLKVIVR
CCEEEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHCCCCEEEEEE
PGKLGLGTAHLLAWKYAIFHSYDILVTMDGDHSHDPADIPKLIGALDATTDLVIGSRYAE
CCCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHCCHHHHEEECCCCC
GGKCDYTGYRLRVSQAANKAARLLLGIKLTEFTTSFRAFRVSRLNAIDFDTLVVGGYSFF
CCCCCCCCEEEEEHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHCCCCCCHHEEECHHHHH
LAVIVQAYRHGLKLSERPIHFHERNAGVSKIPPLEIFRGIANLLRLTAISHFTKVSPAVS
HHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHH
NVIMKCEKCQCEFSLIKADQPGATGTKDEVCLSCGNRQIGAKGA
HHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA