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The map label for this gene is 66044154

Identifier: 66044154

GI number: 66044154

Start: 1018466

End: 1018993

Strand: Reverse

Name: 66044154

Synonym: Psyr_0899

Alternate gene names: NA

Gene position: 1018993-1018466 (Counterclockwise)

Preceding gene: 66044155

Following gene: 66044153

Centisome position: 16.72

GC content: 58.14

Gene sequence:

>528_bases
ATGAAAAATACGCTATTGCGCATCAACGACACGCTTTATCGGGTCTGCATCGGCATTGCCGGTCTGTCGGTGTTGATCAT
GACCCTGATCATTCCCTGGGGCATCTTTGCCCGCTACATCCTCGGCAGCGGCTCCAGCTGGCCTGAACCCACCGCCATCC
TGCTGATGGTGGTGTTTACCTTCTTCGGCGCCGCCGCCAGTTACCGGGCCGGTGCGCACATGGCCGTGTCGATGGCCGTG
GACCGCATGCCGCAGCAGGTGCGCAGAGTCGCCAGTGTAGTGGTGCAGATCCTGATGGCGATCGTCGCCCTGTTCATGAT
TTTCAAGGGCTTCAAGCTGTGCGCTACCACCTGGAATCAATTCGTCGGCGAACTGCCGTTTCTGCGCGTCGGCATCTCTT
ATCTGCCGATCCCCATTGGCGGCCTCGTGACGCTGGTATTCGTCCTGGAAAGACTGTTTCTGGGTGACCAGAGTCATCGC
GCAGTGATGCGCTTCGACGTCATTGAAGAAAGCGAAGGTGCTGCATAA

Upstream 100 bases:

>100_bases
CGGCACTGGCGGCGAGCAACCCCCAAGCGGCCCAATAAGCCTGTCCGATTACGCAGCGGGAACGAGCACCAGCTCGTTCG
CCGCCGCAGTGGTGAGCCTT

Downstream 100 bases:

>100_bases
ATGGACGCTTTTATACTGTTGGGCAGCTTTATCGCGTTGATCCTGATCGGCATGCCGGTGGCCTACGCGCTGGGCCTTTC
AGCCCTGATCGGCGCCTGGT

Product: tripartite ATP-independent periplasmic transporter DctQ

Products: NA

Alternate protein names: C4-Dicarboxylate Transporter Small Subunit; TRAP-Type C4-Dicarboxylate Transport System; C4-Dicarboxylate Transport System Small Permease; C4-Dicarboxylate ABC Transporter Permease Component; TRAP Transporter Small Permease Protein DctQ; TRAP Family C4-Dicarboxylate Transmembrane Transporter; TRAP Dicarboxylate Transporter DctQ Sununit; C4-Dicarboxylate Transport Small Permease Component; TRAP Dicarboxylate Transporter DctQ Subunit

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MKNTLLRINDTLYRVCIGIAGLSVLIMTLIIPWGIFARYILGSGSSWPEPTAILLMVVFTFFGAAASYRAGAHMAVSMAV
DRMPQQVRRVASVVVQILMAIVALFMIFKGFKLCATTWNQFVGELPFLRVGISYLPIPIGGLVTLVFVLERLFLGDQSHR
AVMRFDVIEESEGAA

Sequences:

>Translated_175_residues
MKNTLLRINDTLYRVCIGIAGLSVLIMTLIIPWGIFARYILGSGSSWPEPTAILLMVVFTFFGAAASYRAGAHMAVSMAV
DRMPQQVRRVASVVVQILMAIVALFMIFKGFKLCATTWNQFVGELPFLRVGISYLPIPIGGLVTLVFVLERLFLGDQSHR
AVMRFDVIEESEGAA
>Mature_175_residues
MKNTLLRINDTLYRVCIGIAGLSVLIMTLIIPWGIFARYILGSGSSWPEPTAILLMVVFTFFGAAASYRAGAHMAVSMAV
DRMPQQVRRVASVVVQILMAIVALFMIFKGFKLCATTWNQFVGELPFLRVGISYLPIPIGGLVTLVFVLERLFLGDQSHR
AVMRFDVIEESEGAA

Specific function: Unknown

COG id: COG3090

COG function: function code G; TRAP-type C4-dicarboxylate transport system, small permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19301; Mature: 19301

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNTLLRINDTLYRVCIGIAGLSVLIMTLIIPWGIFARYILGSGSSWPEPTAILLMVVFT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
FFGAAASYRAGAHMAVSMAVDRMPQQVRRVASVVVQILMAIVALFMIFKGFKLCATTWNQ
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVGELPFLRVGISYLPIPIGGLVTLVFVLERLFLGDQSHRAVMRFDVIEESEGAA
HHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKNTLLRINDTLYRVCIGIAGLSVLIMTLIIPWGIFARYILGSGSSWPEPTAILLMVVFT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
FFGAAASYRAGAHMAVSMAVDRMPQQVRRVASVVVQILMAIVALFMIFKGFKLCATTWNQ
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVGELPFLRVGISYLPIPIGGLVTLVFVLERLFLGDQSHRAVMRFDVIEESEGAA
HHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA