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The map label for this gene is yiiZ [H]

Identifier: 66044155

GI number: 66044155

Start: 1019056

End: 1020081

Strand: Reverse

Name: yiiZ [H]

Synonym: Psyr_0900

Alternate gene names: 66044155

Gene position: 1020081-1019056 (Counterclockwise)

Preceding gene: 66044156

Following gene: 66044154

Centisome position: 16.74

GC content: 57.89

Gene sequence:

>1026_bases
ATGGATTTCAAACGCAAGCTCCTCATCGCAGCACTTCCGCTGGCCTTCTGTGTATCAGGCATGGCCCAGGCAGACGTCAA
AATCAAATTCGCCGAGGTTCACCCTGCTGGCTATGCGCCGGTCGTGGCAGAGCAGAACATGGGCAAGAAACTCGAAGAAC
AGTCCAAGGGCGAGATCAGTTTCAAAATGTACGCTGGCGGTGTGCTCGGCTCCGAGAAGGAAGTCGTCGAGCAGGTCCAG
AGTGGCGCCGTGCAGATGACCCGCGTCAGCCTCGGCATCGTTGGCCCGGTAGTGCCGGACGTCAACGTCTTCAACCTGCC
GTTCGTGTTCCATGATCAGGCGCATATGCGCACCATCATCGATGGCCAGATCGGTCAGGAAATTCTCGACAAGATCACCA
ACTCCGAATTCAACATGGTCGCCCTGGCGTGGATGGATGGCGGCACCCGCAACCTGTACACCAAGAAGCCGGTACGCCAG
ATTTCCGACCTCAAAGGCATGAAAATCCGCGTTCAGGGCAACCCGGTGTTTATCGAAACCATTAACGATATGGGCGGCAA
CGGCATCGCCATGGCCACCGGCGAGATCTTCAGCGCCCTGCAGACCGGCGTCATTGACGGTGCGGAAAACAACCCGCCGA
CGTATTTCCAGCATAACCACTACCAGAACGCCAAGTTCTTCACCATGACCGAACACCTGATCCTGCCCGAGCCCATCGTG
ATGTCGAAAACCACGTGGGAAAAGCTCAACCCCGAGCAGCAGGCACTGGTGAAAAAGCTCGCACGTGAAGCGCAGATGGA
AGAACGCGTGCTGTGGGACAAGTCGTCAGCCGATGCCGAGACCAAGCTCAAGGCTGCTGGCGTGGAGTTCATCACGCTGA
CGCCCGAGCAGAAGAAAGCCTTCTACGACGCGACCCAGCCGGTACGCGACAAATACGGTGCGAAATATAAGGGTCTGATC
GACCGCATCGGAGCGGTCCAGACCGATCCGGCACTGGCGGCGAGCAACCCCCAAGCGGCCCAATAA

Upstream 100 bases:

>100_bases
ACCTGGCGTGCAGGGCCTGGAGGAACCCACGTTTCAGGGCTGACAGCGCCCTACCGAAAATCCCGTAGCTCGACCAAAAA
TAACAAAATCGGAGATATCC

Downstream 100 bases:

>100_bases
GCCTGTCCGATTACGCAGCGGGAACGAGCACCAGCTCGTTCGCCGCCGCAGTGGTGAGCCTTATGAAAAATACGCTATTG
CGCATCAACGACACGCTTTA

Product: TRAP dicarboxylate transporter- DctP subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MDFKRKLLIAALPLAFCVSGMAQADVKIKFAEVHPAGYAPVVAEQNMGKKLEEQSKGEISFKMYAGGVLGSEKEVVEQVQ
SGAVQMTRVSLGIVGPVVPDVNVFNLPFVFHDQAHMRTIIDGQIGQEILDKITNSEFNMVALAWMDGGTRNLYTKKPVRQ
ISDLKGMKIRVQGNPVFIETINDMGGNGIAMATGEIFSALQTGVIDGAENNPPTYFQHNHYQNAKFFTMTEHLILPEPIV
MSKTTWEKLNPEQQALVKKLAREAQMEERVLWDKSSADAETKLKAAGVEFITLTPEQKKAFYDATQPVRDKYGAKYKGLI
DRIGAVQTDPALAASNPQAAQ

Sequences:

>Translated_341_residues
MDFKRKLLIAALPLAFCVSGMAQADVKIKFAEVHPAGYAPVVAEQNMGKKLEEQSKGEISFKMYAGGVLGSEKEVVEQVQ
SGAVQMTRVSLGIVGPVVPDVNVFNLPFVFHDQAHMRTIIDGQIGQEILDKITNSEFNMVALAWMDGGTRNLYTKKPVRQ
ISDLKGMKIRVQGNPVFIETINDMGGNGIAMATGEIFSALQTGVIDGAENNPPTYFQHNHYQNAKFFTMTEHLILPEPIV
MSKTTWEKLNPEQQALVKKLAREAQMEERVLWDKSSADAETKLKAAGVEFITLTPEQKKAFYDATQPVRDKYGAKYKGLI
DRIGAVQTDPALAASNPQAAQ
>Mature_341_residues
MDFKRKLLIAALPLAFCVSGMAQADVKIKFAEVHPAGYAPVVAEQNMGKKLEEQSKGEISFKMYAGGVLGSEKEVVEQVQ
SGAVQMTRVSLGIVGPVVPDVNVFNLPFVFHDQAHMRTIIDGQIGQEILDKITNSEFNMVALAWMDGGTRNLYTKKPVRQ
ISDLKGMKIRVQGNPVFIETINDMGGNGIAMATGEIFSALQTGVIDGAENNPPTYFQHNHYQNAKFFTMTEHLILPEPIV
MSKTTWEKLNPEQQALVKKLAREAQMEERVLWDKSSADAETKLKAAGVEFITLTPEQKKAFYDATQPVRDKYGAKYKGLI
DRIGAVQTDPALAASNPQAAQ

Specific function: Unknown

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790004, Length=308, Percent_Identity=29.2207792207792, Blast_Score=132, Evalue=3e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018389
- InterPro:   IPR004682 [H]

Pfam domain/function: PF03480 SBP_bac_7 [H]

EC number: NA

Molecular weight: Translated: 37546; Mature: 37546

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFKRKLLIAALPLAFCVSGMAQADVKIKFAEVHPAGYAPVVAEQNMGKKLEEQSKGEIS
CCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCEEECCCCCHHHHHHCCCCEE
FKMYAGGVLGSEKEVVEQVQSGAVQMTRVSLGIVGPVVPDVNVFNLPFVFHDQAHMRTII
EEEEECCCCCCHHHHHHHHHHCCEEEEEEEEEECCCCCCCCEEEECCEEEECHHHHHHHH
DGQIGQEILDKITNSEFNMVALAWMDGGTRNLYTKKPVRQISDLKGMKIRVQGNPVFIET
CCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHHHCCCCCEEEECCCEEEEEE
INDMGGNGIAMATGEIFSALQTGVIDGAENNPPTYFQHNHYQNAKFFTMTEHLILPEPIV
ECCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCEEEEEECCEECCCCEE
MSKTTWEKLNPEQQALVKKLAREAQMEERVLWDKSSADAETKLKAAGVEFITLTPEQKKA
ECCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCEEEEEECCHHHHH
FYDATQPVRDKYGAKYKGLIDRIGAVQTDPALAASNPQAAQ
HHHCCCHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDFKRKLLIAALPLAFCVSGMAQADVKIKFAEVHPAGYAPVVAEQNMGKKLEEQSKGEIS
CCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCEEECCCCCHHHHHHCCCCEE
FKMYAGGVLGSEKEVVEQVQSGAVQMTRVSLGIVGPVVPDVNVFNLPFVFHDQAHMRTII
EEEEECCCCCCHHHHHHHHHHCCEEEEEEEEEECCCCCCCCEEEECCEEEECHHHHHHHH
DGQIGQEILDKITNSEFNMVALAWMDGGTRNLYTKKPVRQISDLKGMKIRVQGNPVFIET
CCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHHHCCCCCEEEECCCEEEEEE
INDMGGNGIAMATGEIFSALQTGVIDGAENNPPTYFQHNHYQNAKFFTMTEHLILPEPIV
ECCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCEEEEEECCEECCCCEE
MSKTTWEKLNPEQQALVKKLAREAQMEERVLWDKSSADAETKLKAAGVEFITLTPEQKKA
ECCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCEEEEEECCHHHHH
FYDATQPVRDKYGAKYKGLIDRIGAVQTDPALAASNPQAAQ
HHHCCCHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677609; 7729880 [H]