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The map label for this gene is 66044149

Identifier: 66044149

GI number: 66044149

Start: 1014523

End: 1014927

Strand: Reverse

Name: 66044149

Synonym: Psyr_0894

Alternate gene names: NA

Gene position: 1014927-1014523 (Counterclockwise)

Preceding gene: 66044150

Following gene: 66044147

Centisome position: 16.66

GC content: 54.07

Gene sequence:

>405_bases
ATGCTCAAGTACATGCTTGACACCAACATTTGCATTTTTACTATAAAGAACAAGCCAGCTTCGGTGCGTGAAGCCTGCAA
CCTCCATCACGGACAGCTACGTATCAGCGCGATCACATTGATGGAGCTTGTATACGGCGCAGAAAAGTCTTTGAGCCCCG
AAAGGAATCTTGCCGTTGTTGAGGGTTTCACGGCGCGTCTTGAAGTGCTCCCTTACGACAGCGACGCGGCGGCTCATACC
GGCATGATCAGAGCCGAACTGGCCAGAGCGGGCACGCCGATCGGCCCGTACGATCAAATGATTGCAGGACACGCCCGCTC
TCTAGGCTTGGTTGTCATCACTAACAACCAGCGTGAATTCCAGCGCGTCGAGGGGCTGAGGGTAGAAGACTGGGTAAGCC
AATGA

Upstream 100 bases:

>100_bases
CCGGTGAAATGTGGAACAGCTGGTTCGATGGTGAAAGTGTCAGTGATGATTTCATGGCAGAGCGCGGACAACCAGCCGAA
CAGCAGCGCGAATCGCTCTG

Downstream 100 bases:

>100_bases
CCTCAACACGATAACTGCAACGCCTCTTATGTTTTGAGCCCGTCAGCCACCCGGTGAACGCCCATCATCTGTCGAGGCAT
CCGGGATTGAGCCTTTTTAA

Product: PilT protein, N-terminal

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MLKYMLDTNICIFTIKNKPASVREACNLHHGQLRISAITLMELVYGAEKSLSPERNLAVVEGFTARLEVLPYDSDAAAHT
GMIRAELARAGTPIGPYDQMIAGHARSLGLVVITNNQREFQRVEGLRVEDWVSQ

Sequences:

>Translated_134_residues
MLKYMLDTNICIFTIKNKPASVREACNLHHGQLRISAITLMELVYGAEKSLSPERNLAVVEGFTARLEVLPYDSDAAAHT
GMIRAELARAGTPIGPYDQMIAGHARSLGLVVITNNQREFQRVEGLRVEDWVSQ
>Mature_134_residues
MLKYMLDTNICIFTIKNKPASVREACNLHHGQLRISAITLMELVYGAEKSLSPERNLAVVEGFTARLEVLPYDSDAAAHT
GMIRAELARAGTPIGPYDQMIAGHARSLGLVVITNNQREFQRVEGLRVEDWVSQ

Specific function: Unknown

COG id: COG1487

COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.nodosus virulence-associated protein C (vapC) [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002716
- InterPro:   IPR006596 [H]

Pfam domain/function: PF01850 PIN [H]

EC number: NA

Molecular weight: Translated: 14881; Mature: 14881

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKYMLDTNICIFTIKNKPASVREACNLHHGQLRISAITLMELVYGAEKSLSPERNLAVV
CEEEEEECCEEEEEECCCCCHHHHHHCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCEEEE
EGFTARLEVLPYDSDAAAHTGMIRAELARAGTPIGPYDQMIAGHARSLGLVVITNNQREF
ECCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEEEEEECCHHHH
QRVEGLRVEDWVSQ
HHHCCCCHHHHHCC
>Mature Secondary Structure
MLKYMLDTNICIFTIKNKPASVREACNLHHGQLRISAITLMELVYGAEKSLSPERNLAVV
CEEEEEECCEEEEEECCCCCHHHHHHCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCEEEE
EGFTARLEVLPYDSDAAAHTGMIRAELARAGTPIGPYDQMIAGHARSLGLVVITNNQREF
ECCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEEEEEECCHHHH
QRVEGLRVEDWVSQ
HHHCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]