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The map label for this gene is 66044150

Identifier: 66044150

GI number: 66044150

Start: 1014927

End: 1015157

Strand: Reverse

Name: 66044150

Synonym: Psyr_0895

Alternate gene names: NA

Gene position: 1015157-1014927 (Counterclockwise)

Preceding gene: 66044151

Following gene: 66044149

Centisome position: 16.66

GC content: 54.55

Gene sequence:

>231_bases
ATGGAACAATCCACAGTCTTCAAAAGCAATCGAAGCCAGGCTGTCCGACTGCCAAAAGCGGTGGCCTTGCCCGACGACGT
GAAACGTGTCGATGTTATAGCCGTGGGCAGAACCCGCATTATTTCCCCCGCCGGTGAAATGTGGAACAGCTGGTTCGATG
GTGAAAGTGTCAGTGATGATTTCATGGCAGAGCGCGGACAACCAGCCGAACAGCAGCGCGAATCGCTCTGA

Upstream 100 bases:

>100_bases
ACTCATTTCAAGTTACAGAACGAGTCGGGATATTCCGTTGACATATCCCAAAAAAACATATTCTTATTCATCCGAAACAT
CAGCCAAGGATGAATCACTC

Downstream 100 bases:

>100_bases
TGCTCAAGTACATGCTTGACACCAACATTTGCATTTTTACTATAAAGAACAAGCCAGCTTCGGTGCGTGAAGCCTGCAAC
CTCCATCACGGACAGCTACG

Product: SpoVT/AbrB-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 76; Mature: 76

Protein sequence:

>76_residues
MEQSTVFKSNRSQAVRLPKAVALPDDVKRVDVIAVGRTRIISPAGEMWNSWFDGESVSDDFMAERGQPAEQQRESL

Sequences:

>Translated_76_residues
MEQSTVFKSNRSQAVRLPKAVALPDDVKRVDVIAVGRTRIISPAGEMWNSWFDGESVSDDFMAERGQPAEQQRESL
>Mature_76_residues
MEQSTVFKSNRSQAVRLPKAVALPDDVKRVDVIAVGRTRIISPAGEMWNSWFDGESVSDDFMAERGQPAEQQRESL

Specific function: Unknown

COG id: COG4456

COG function: function code S; Virulence-associated protein and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the vapB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007159 [H]

Pfam domain/function: PF04014 SpoVT_AbrB [H]

EC number: NA

Molecular weight: Translated: 8523; Mature: 8523

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQSTVFKSNRSQAVRLPKAVALPDDVKRVDVIAVGRTRIISPAGEMWNSWFDGESVSDD
CCCCCCCCCCCCCEECCCCCCCCCCCCCEEEEEECCCCEEECCCHHHHHHCCCCCCCCCH
FMAERGQPAEQQRESL
HHHCCCCCHHHHHHCC
>Mature Secondary Structure
MEQSTVFKSNRSQAVRLPKAVALPDDVKRVDVIAVGRTRIISPAGEMWNSWFDGESVSDD
CCCCCCCCCCCCCEECCCCCCCCCCCCCEEEEEECCCCEEECCCHHHHHHCCCCCCCCCH
FMAERGQPAEQQRESL
HHHCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9171415; 12384590 [H]