| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66044140
Identifier: 66044140
GI number: 66044140
Start: 1007811
End: 1008260
Strand: Reverse
Name: 66044140
Synonym: Psyr_0885
Alternate gene names: NA
Gene position: 1008260-1007811 (Counterclockwise)
Preceding gene: 66044146
Following gene: 66044139
Centisome position: 16.55
GC content: 64.67
Gene sequence:
>450_bases ATGTCTCTGCCCATACGCGACTATCATCCAGCCCTGCCCCGGCAGGACGATTTCTGGCAACACTTGGGCATTCCCGCACG AGGCGCGCGGCTGTACTCGGCGCTGCATGACGGCTTGCCGTATGAAGTCTTCGAACGTCTGGCGCATTACACCGACCTGA ACCGCTCGACCCTGGCCGAACATCTGGGCATCGCTCCGGCGACCTTGCAGCGACGTCTCAAGGTGCGCCGCTTCAATGCC GAGGAAAGCGATCGGCTGTTCCGCCTGGCAGCGGTGTACAAGGCGGCGCTGGACCTGTTCGAAAACGACGCCGAAGCGAC TCGTCTGTGGCTGGCCAACCCGGTCTACGGGCTGGGTACTCGCAGGCCGCTGGAAATGCTCGCGACCTCGGCGGAGGCTC AGGCAGTGCTCGACCTGATCGGCCGCCTGGAGCACGGGGTCGTGGCGTGA
Upstream 100 bases:
>100_bases TATTCGCTATCCGTTGCTGTAAATCACTGTCGCGACGTCTGAAACGTGCCTATTATCAATTGATAGATTTAATAGCAATC ACTCGATAGACAGGTGTGCC
Downstream 100 bases:
>100_bases TAGCGGTCTATCGACTGGTCAAGCGCAAATGGCTGGCGCAGGCCTTCGACGGCGAAGGCGCCAAGCTCTATGGCGGACGC TGGAACAGCAAAGGCAACGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MSLPIRDYHPALPRQDDFWQHLGIPARGARLYSALHDGLPYEVFERLAHYTDLNRSTLAEHLGIAPATLQRRLKVRRFNA EESDRLFRLAAVYKAALDLFENDAEATRLWLANPVYGLGTRRPLEMLATSAEAQAVLDLIGRLEHGVVA
Sequences:
>Translated_149_residues MSLPIRDYHPALPRQDDFWQHLGIPARGARLYSALHDGLPYEVFERLAHYTDLNRSTLAEHLGIAPATLQRRLKVRRFNA EESDRLFRLAAVYKAALDLFENDAEATRLWLANPVYGLGTRRPLEMLATSAEAQAVLDLIGRLEHGVVA >Mature_148_residues SLPIRDYHPALPRQDDFWQHLGIPARGARLYSALHDGLPYEVFERLAHYTDLNRSTLAEHLGIAPATLQRRLKVRRFNAE ESDRLFRLAAVYKAALDLFENDAEATRLWLANPVYGLGTRRPLEMLATSAEAQAVLDLIGRLEHGVVA
Specific function: Unknown
COG id: COG5642
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16872; Mature: 16741
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLPIRDYHPALPRQDDFWQHLGIPARGARLYSALHDGLPYEVFERLAHYTDLNRSTLAE CCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHH HLGIAPATLQRRLKVRRFNAEESDRLFRLAAVYKAALDLFENDAEATRLWLANPVYGLGT HHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCC RRPLEMLATSAEAQAVLDLIGRLEHGVVA CCHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SLPIRDYHPALPRQDDFWQHLGIPARGARLYSALHDGLPYEVFERLAHYTDLNRSTLAE CCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHH HLGIAPATLQRRLKVRRFNAEESDRLFRLAAVYKAALDLFENDAEATRLWLANPVYGLGT HHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCC RRPLEMLATSAEAQAVLDLIGRLEHGVVA CCHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA