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The map label for this gene is chrR [H]

Identifier: 66044146

GI number: 66044146

Start: 1012163

End: 1012825

Strand: Reverse

Name: chrR [H]

Synonym: Psyr_0891

Alternate gene names: 66044146

Gene position: 1012825-1012163 (Counterclockwise)

Preceding gene: 66044147

Following gene: 66044140

Centisome position: 16.62

GC content: 61.69

Gene sequence:

>663_bases
ATGGGCCCACAACATCATCCGGACGACGCCACGCTGGTCAGCTATGCCGCAGGAGCGCTGTCGCAGGTCATCTCGTTAGT
CACTGCCGCGCACCTGGAGCGCTGCGCCGAGTGCCGGGCGCGGCTCAGGCAGGCCGAGGCCATTGGCGGTGTGTTGATGC
AGCAGCACACCAGCAGTGTGGTGCCACTCAAGGGCCGATCGGCCATGCTCGCGCGGCTTGACGAGCAGCAAGCGGGGCTC
GTACCCGCTATGCATTCGATGCCGGCGGCCAATCAGGACCCGGACCTGATGCCGGTCTGCATGCAGGCGCATTTTGGTCG
ACACCTGAGCACATTAAAGTGGAAGACCCTGATCCCCGGCGTAAAACGTGTACGCGCTGAAGGCATCGAACAGGGCAACC
TGATGCTGCTGAAAATCGCCCCCGGCGTGAGCATGCCGGTGCACAGCCACGAAAGCGGCGAGATGACCATGGTCCTCAAG
GGCGCGTATTACGACGTACAGGGAGAGTTCGGACTCAACGATGTGGCCGATCTGGACAGCCATATCCATCACCAGCCCAT
TGCCTACCCTGACCGGGAATGCATTTGCGTGCTGGCCACTGAATCGAAGCTGCGTTTTCAGGGGCTGCTGGCGCGGATGA
TGCAGCCGTTTTTCGGGATTTGA

Upstream 100 bases:

>100_bases
ACCGGGAGATTTCCGAACGCTTGGGTATGCCGCTTGGCACAGTGAAGTCCTGCCTGCGCCTTGCGTTTCAAAAATTGCGC
TCGCGGATAGAGGAATCATG

Downstream 100 bases:

>100_bases
AAAACGGCTGCGAGCAGATTGAGGAGCCAGGCAACTAGCAGAACCTGCTATTCAAAAAGGGCTTGAACGCGAGCCAGCAC
ATCGTCGATTATCATCTCGG

Product: transcriptional activator ChrR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MGPQHHPDDATLVSYAAGALSQVISLVTAAHLERCAECRARLRQAEAIGGVLMQQHTSSVVPLKGRSAMLARLDEQQAGL
VPAMHSMPAANQDPDLMPVCMQAHFGRHLSTLKWKTLIPGVKRVRAEGIEQGNLMLLKIAPGVSMPVHSHESGEMTMVLK
GAYYDVQGEFGLNDVADLDSHIHHQPIAYPDRECICVLATESKLRFQGLLARMMQPFFGI

Sequences:

>Translated_220_residues
MGPQHHPDDATLVSYAAGALSQVISLVTAAHLERCAECRARLRQAEAIGGVLMQQHTSSVVPLKGRSAMLARLDEQQAGL
VPAMHSMPAANQDPDLMPVCMQAHFGRHLSTLKWKTLIPGVKRVRAEGIEQGNLMLLKIAPGVSMPVHSHESGEMTMVLK
GAYYDVQGEFGLNDVADLDSHIHHQPIAYPDRECICVLATESKLRFQGLLARMMQPFFGI
>Mature_219_residues
GPQHHPDDATLVSYAAGALSQVISLVTAAHLERCAECRARLRQAEAIGGVLMQQHTSSVVPLKGRSAMLARLDEQQAGLV
PAMHSMPAANQDPDLMPVCMQAHFGRHLSTLKWKTLIPGVKRVRAEGIEQGNLMLLKIAPGVSMPVHSHESGEMTMVLKG
AYYDVQGEFGLNDVADLDSHIHHQPIAYPDRECICVLATESKLRFQGLLARMMQPFFGI

Specific function: Anti-sigma factor that inhibits the activity of the extracytoplasmic function (ECF) sigma (E) factor, thereby indirectly regulating the transcription of the cycA and rpoE genes [H]

COG id: COG3806

COG function: function code T; Anti-sigma factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012807
- InterPro:   IPR011051
- InterPro:   IPR014710 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24037; Mature: 23906

Theoretical pI: Translated: 7.14; Mature: 7.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGPQHHPDDATLVSYAAGALSQVISLVTAAHLERCAECRARLRQAEAIGGVLMQQHTSSV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VPLKGRSAMLARLDEQQAGLVPAMHSMPAANQDPDLMPVCMQAHFGRHLSTLKWKTLIPG
CCCCCCHHHHHHHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VKRVRAEGIEQGNLMLLKIAPGVSMPVHSHESGEMTMVLKGAYYDVQGEFGLNDVADLDS
HHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCEEEECCCCCCCHHHHHHH
HIHHQPIAYPDRECICVLATESKLRFQGLLARMMQPFFGI
HHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GPQHHPDDATLVSYAAGALSQVISLVTAAHLERCAECRARLRQAEAIGGVLMQQHTSSV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VPLKGRSAMLARLDEQQAGLVPAMHSMPAANQDPDLMPVCMQAHFGRHLSTLKWKTLIPG
CCCCCCHHHHHHHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VKRVRAEGIEQGNLMLLKIAPGVSMPVHSHESGEMTMVLKGAYYDVQGEFGLNDVADLDS
HHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCEEEECCCCCCCHHHHHHH
HIHHQPIAYPDRECICVLATESKLRFQGLLARMMQPFFGI
HHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7721683 [H]