| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66044139
Identifier: 66044139
GI number: 66044139
Start: 1007353
End: 1007814
Strand: Reverse
Name: 66044139
Synonym: Psyr_0884
Alternate gene names: NA
Gene position: 1007814-1007353 (Counterclockwise)
Preceding gene: 66044140
Following gene: 66044138
Centisome position: 16.54
GC content: 62.99
Gene sequence:
>462_bases GTGATAGCGGTCTATCGACTGGTCAAGCGCAAATGGCTGGCGCAGGCCTTCGACGGCGAAGGCGCCAAGCTCTATGGCGG ACGCTGGAACAGCAAAGGCAACGCCTGCGTGTACTGCGCGGGCAGCGAGTCACTGGCCCTGCTGGAAGTGCTGGTACACC TGAACAACGCCACTGTGGCTCAGCATTACACGATGCTTGAACTGCAGATTGCCGAGGAGCACGTCCTCAATGCACGCCCG GACACCCTGCCCCGCGACTGGCGCGAAGAGCCTGCACCACCGGCAACCGCCTCGTTCGGCGACGACTGGCTGTCCTCCGC TCAGAGCCTGGCACTGGCAGTGCCCAGCGTGATCATCCCGCGCGAGTCCAACTACCTGCTCAACGTCCAGCACCCGGAGT TCAGGGCGGTTGTGGCGACGGCCAAAGAGCTGGATTTTGTGGTTGATCCGCGTTTGGGGTGA
Upstream 100 bases:
>100_bases ACGGGCTGGGTACTCGCAGGCCGCTGGAAATGCTCGCGACCTCGGCGGAGGCTCAGGCAGTGCTCGACCTGATCGGCCGC CTGGAGCACGGGGTCGTGGC
Downstream 100 bases:
>100_bases ACTGGCTGAACGGTTAGCTCGATTATGGGGGGCTCTTGCTGTCCCATGGGTTCAAAGCAACGTACGCCGCGACCAATGCA TTCAGCACCAGAAGTAACGC
Product: hypothetical protein
Products: NA
Alternate protein names: RES Domain-Containing Protein; Res Domain Protein
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MIAVYRLVKRKWLAQAFDGEGAKLYGGRWNSKGNACVYCAGSESLALLEVLVHLNNATVAQHYTMLELQIAEEHVLNARP DTLPRDWREEPAPPATASFGDDWLSSAQSLALAVPSVIIPRESNYLLNVQHPEFRAVVATAKELDFVVDPRLG
Sequences:
>Translated_153_residues MIAVYRLVKRKWLAQAFDGEGAKLYGGRWNSKGNACVYCAGSESLALLEVLVHLNNATVAQHYTMLELQIAEEHVLNARP DTLPRDWREEPAPPATASFGDDWLSSAQSLALAVPSVIIPRESNYLLNVQHPEFRAVVATAKELDFVVDPRLG >Mature_153_residues MIAVYRLVKRKWLAQAFDGEGAKLYGGRWNSKGNACVYCAGSESLALLEVLVHLNNATVAQHYTMLELQIAEEHVLNARP DTLPRDWREEPAPPATASFGDDWLSSAQSLALAVPSVIIPRESNYLLNVQHPEFRAVVATAKELDFVVDPRLG
Specific function: Unknown
COG id: COG5654
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16928; Mature: 16928
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAVYRLVKRKWLAQAFDGEGAKLYGGRWNSKGNACVYCAGSESLALLEVLVHLNNATVA CHHHHHHHHHHHHHHHCCCCCCEEECCEECCCCCEEEEEECCCCHHHHHHHHHCCCCCHH QHYTMLELQIAEEHVLNARPDTLPRDWREEPAPPATASFGDDWLSSAQSLALAVPSVIIP HHEEEEEEEECHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEE RESNYLLNVQHPEFRAVVATAKELDFVVDPRLG CCCCEEEEECCCCHHHHHHHHHHCCEEECCCCC >Mature Secondary Structure MIAVYRLVKRKWLAQAFDGEGAKLYGGRWNSKGNACVYCAGSESLALLEVLVHLNNATVA CHHHHHHHHHHHHHHHCCCCCCEEECCEECCCCCEEEEEECCCCHHHHHHHHHCCCCCHH QHYTMLELQIAEEHVLNARPDTLPRDWREEPAPPATASFGDDWLSSAQSLALAVPSVIIP HHEEEEEEEECHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEE RESNYLLNVQHPEFRAVVATAKELDFVVDPRLG CCCCEEEEECCCCHHHHHHHHHHCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA