| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
Click here to switch to the map view.
The map label for this gene is 66043998
Identifier: 66043998
GI number: 66043998
Start: 841367
End: 841780
Strand: Reverse
Name: 66043998
Synonym: Psyr_0737
Alternate gene names: NA
Gene position: 841780-841367 (Counterclockwise)
Preceding gene: 66043999
Following gene: 66043995
Centisome position: 13.81
GC content: 50.0
Gene sequence:
>414_bases ATGAAAGCTCGCTCAAAGAAATCAGTAGGCATTGTTGCTTTGGCACTTTTAATGGGCAAGGTGTATGCCGCTCCTACTCC TGCCGCGTGCCCGGATGTCAGCGTCATCAAACAACATCAGGAAGGGCAAGGTTTTGTGTATACGGCGCCAGCCCCAAACA ACCAACAATGGAGAGGCGAAAACCCGCGAGGCGATGCAAAGGACATAAATAGCATTGCATTCAAAAGTGCCAATATACGC AACAGAAGCGCGATCACAGGTAATGCATTTGTGGCGTGCGACTATGAGGGTAATAGCAGCGCAGGGATCAGGATGAGTCT TGAAACACTCAAGGTAGCAACACCTGTGGGGAAAGCTTGGAACGGACTCAGCTGCAGTGAAAGTAACCCCTCTGCCTGCA CGTTTGAGTATTGA
Upstream 100 bases:
>100_bases AAGCCGGTGGTGGTGATCTGTCGGTTAAAAGTATGGCAAGCAACTCGCTCACCCACTGTAAAAAATAAAATCAACGTAGA TCCACGATGGAGAAAGTAAA
Downstream 100 bases:
>100_bases TATTTTTATAATATAAATTTTACAAATAGTTATTCAGCTTAAGCCAGGTAACTTTTCGTAAAACTACAAAACCAGATCAC GGCGCCCACGACTATCGGCT
Product: putative transmembrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
>137_residues MKARSKKSVGIVALALLMGKVYAAPTPAACPDVSVIKQHQEGQGFVYTAPAPNNQQWRGENPRGDAKDINSIAFKSANIR NRSAITGNAFVACDYEGNSSAGIRMSLETLKVATPVGKAWNGLSCSESNPSACTFEY
Sequences:
>Translated_137_residues MKARSKKSVGIVALALLMGKVYAAPTPAACPDVSVIKQHQEGQGFVYTAPAPNNQQWRGENPRGDAKDINSIAFKSANIR NRSAITGNAFVACDYEGNSSAGIRMSLETLKVATPVGKAWNGLSCSESNPSACTFEY >Mature_137_residues MKARSKKSVGIVALALLMGKVYAAPTPAACPDVSVIKQHQEGQGFVYTAPAPNNQQWRGENPRGDAKDINSIAFKSANIR NRSAITGNAFVACDYEGNSSAGIRMSLETLKVATPVGKAWNGLSCSESNPSACTFEY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14540; Mature: 14540
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKARSKKSVGIVALALLMGKVYAAPTPAACPDVSVIKQHQEGQGFVYTAPAPNNQQWRGE CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCEEEECCCCCCCCCCCC NPRGDAKDINSIAFKSANIRNRSAITGNAFVACDYEGNSSAGIRMSLETLKVATPVGKAW CCCCCCCCCCHHHCCCCCCCCCCEECCCEEEEEECCCCCCCCEEEEEEEEEEECCCCCCC NGLSCSESNPSACTFEY CCCCCCCCCCCEEEECC >Mature Secondary Structure MKARSKKSVGIVALALLMGKVYAAPTPAACPDVSVIKQHQEGQGFVYTAPAPNNQQWRGE CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCEEEECCCCCCCCCCCC NPRGDAKDINSIAFKSANIRNRSAITGNAFVACDYEGNSSAGIRMSLETLKVATPVGKAW CCCCCCCCCCHHHCCCCCCCCCCEECCCEEEEEECCCCCCCCEEEEEEEEEEECCCCCCC NGLSCSESNPSACTFEY CCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA