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The map label for this gene is AvrRpm1

Identifier: 66043999

GI number: 66043999

Start: 842575

End: 843261

Strand: Reverse

Name: AvrRpm1

Synonym: Psyr_0738

Alternate gene names: NA

Gene position: 843261-842575 (Counterclockwise)

Preceding gene: 66044000

Following gene: 66043998

Centisome position: 13.84

GC content: 49.34

Gene sequence:

>687_bases
ATGGGCTGTGTATCGAGTACGTCAAGAAGCACTGGATATTATTCCGGTTACGAAAGCCATGAGGAACCCAGGGCGGCAAG
CAGACCGACGAACAGCGATGATCGCGGCTACGAAACTGATTCAGAGCCATCCAGTGGCAACTTGATACCCAATGCGAGGA
GCGTGTATAGCGAATCTGTTTTGTGGCACGGTACATCCATGCAATCAAAAATAGACTTGAGAAGCAAAGGGTTCGATGCA
GGTAGAAAAACTGGCGGCGCTACTGCAGGTGGCAACGCAAATATGTTTATGAACTTGAGTAGGGAGGCTCAATCTGAAAC
CAGACGACATCATTATTTGTCTTCATCCCAAAAAGAAGCCAAGGACTTTGCCATGTTTGCTGACACGAGTAATCCCACAC
TGGTACGCACTATCGGCGTCAGAAACAACTTAAGCCTGATAACCGACCCCAGGACCGGCGGCACCGCACTCATGACAGAT
CAATCGATTCCGCGCAAATTTGTGCTCGGATCAAAAAGCAGTGCTCCTGGAGAAAATGCGAAAGTCTTCAGGGATGAAAT
GCGTGCGGCAGGACACAATGTGTCGACAAAGCAAGCCGGCGAACTGCTCAGAGAAGTCCAGTCTGATTCAGACGATGACA
ACTTCCCTGACCCCGATGACTTTATCATGAGCCGCTTTACTGGATAA

Upstream 100 bases:

>100_bases
CAGTCAATCGCTTCCAGCGCAATGGGTCGACTCTGACAGGGAACTCATTAGCTCTCGAATGCCACAGATCAGTTCCATAC
CTTCAAGCAAAAGGTCTTTT

Downstream 100 bases:

>100_bases
TCGGATGGAGATAAAGGTCTTCAAGAATTCGTCTGAAAAAACCGAACTCTTCGGGCCAGCATAATCGAAGTTTCAATCAG
TACTGCTGAATGAGTCGAGT

Product: type III effector protein AvrRpm1

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MGCVSSTSRSTGYYSGYESHEEPRAASRPTNSDDRGYETDSEPSSGNLIPNARSVYSESVLWHGTSMQSKIDLRSKGFDA
GRKTGGATAGGNANMFMNLSREAQSETRRHHYLSSSQKEAKDFAMFADTSNPTLVRTIGVRNNLSLITDPRTGGTALMTD
QSIPRKFVLGSKSSAPGENAKVFRDEMRAAGHNVSTKQAGELLREVQSDSDDDNFPDPDDFIMSRFTG

Sequences:

>Translated_228_residues
MGCVSSTSRSTGYYSGYESHEEPRAASRPTNSDDRGYETDSEPSSGNLIPNARSVYSESVLWHGTSMQSKIDLRSKGFDA
GRKTGGATAGGNANMFMNLSREAQSETRRHHYLSSSQKEAKDFAMFADTSNPTLVRTIGVRNNLSLITDPRTGGTALMTD
QSIPRKFVLGSKSSAPGENAKVFRDEMRAAGHNVSTKQAGELLREVQSDSDDDNFPDPDDFIMSRFTG
>Mature_227_residues
GCVSSTSRSTGYYSGYESHEEPRAASRPTNSDDRGYETDSEPSSGNLIPNARSVYSESVLWHGTSMQSKIDLRSKGFDAG
RKTGGATAGGNANMFMNLSREAQSETRRHHYLSSSQKEAKDFAMFADTSNPTLVRTIGVRNNLSLITDPRTGGTALMTDQ
SIPRKFVLGSKSSAPGENAKVFRDEMRAAGHNVSTKQAGELLREVQSDSDDDNFPDPDDFIMSRFTG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24839; Mature: 24708

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGCVSSTSRSTGYYSGYESHEEPRAASRPTNSDDRGYETDSEPSSGNLIPNARSVYSESV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCC
LWHGTSMQSKIDLRSKGFDAGRKTGGATAGGNANMFMNLSREAQSETRRHHYLSSSQKEA
EECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCHHHH
KDFAMFADTSNPTLVRTIGVRNNLSLITDPRTGGTALMTDQSIPRKFVLGSKSSAPGENA
HHHEEEECCCCCEEEEEECCCCCCEEEECCCCCCEEEEECCCCCCEEEECCCCCCCCCCH
KVFRDEMRAAGHNVSTKQAGELLREVQSDSDDDNFPDPDDFIMSRFTG
HHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure 
GCVSSTSRSTGYYSGYESHEEPRAASRPTNSDDRGYETDSEPSSGNLIPNARSVYSESV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCC
LWHGTSMQSKIDLRSKGFDAGRKTGGATAGGNANMFMNLSREAQSETRRHHYLSSSQKEA
EECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCHHHH
KDFAMFADTSNPTLVRTIGVRNNLSLITDPRTGGTALMTDQSIPRKFVLGSKSSAPGENA
HHHEEEECCCCCEEEEEECCCCCCEEEECCCCCCEEEEECCCCCCEEEECCCCCCCCCCH
KVFRDEMRAAGHNVSTKQAGELLREVQSDSDDDNFPDPDDFIMSRFTG
HHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA