| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66043994
Identifier: 66043994
GI number: 66043994
Start: 838293
End: 839249
Strand: Reverse
Name: 66043994
Synonym: Psyr_0733
Alternate gene names: NA
Gene position: 839249-838293 (Counterclockwise)
Preceding gene: 66043995
Following gene: 66043990
Centisome position: 13.77
GC content: 55.69
Gene sequence:
>957_bases ATGCTCAGTTTCTTCACGCGAAGAAAAGCGTCTCCGATATCGTCCAATGCTGCTGCAGGCTTTTTCAAACCAGAATCTCC CGACGCGTTGCTGTCGACTTCCCGACGGCGCCAGTTGATTGAAAACATCTGGCAGCGGACCTCTCTGCCGCGTGAGCAGT TCGAGGCCCTTTACATGCAGGCATTCAAGAGCTACGCAGCCTTGGTGCAGCATCTCCCTGCCTCTGAGAATCACCACCAT GCATATCATGGTGGCATGCTGGATCACGGTCTCGAAATCGTCGCCTATGCATTGAAGATACGGCAAATGTATTTGCTCCC CATCGGAGCACCGCCCGAGTCGCAGGCGGCCCAGTCGGAAGCATGGTCTGCAGCATCGGCTTACGGTGCGCTCGTCCACG ACCTGGGCAAGATTGCAGTAGACGTCAAGGTTGAGCTCGCAGATGGCACTATCTGGCATCCATGGCATGGGCCTCTGGAT CAGCCATACCGATTCAAGTACGTGAAAGGTCGAGACTATCGGTTACATGGAGCCGCTTCGTCGCTGATCTACTCCCATGT AATTCCGGCAAAGGCACTGGACTGGCTCAGCGGGTTTCCCGAGCTCTGGTCTCAACTCGTGTTCGCGTTCGCGTTCGCGT TCGCAGGTCAGTATGAGCATGCCGATATCCTTGGTGAAATTGTCTCCCAAGCAGACCAGGCTTCCGTGGCACAGGAACTC GGAGGCAATCCTGGCAAGGCTATGTCAGCGCCCAAACAGTCTATCCAACGGCAGTTGGCTGAAGGCTTGAGGATGCTCGT GGCGGATAAATTCAAGTTGAACCAGCCCGACGGCCCCTCGGACGGATGGCTGACTCAGGAAGGCTTGTGGCTTGTCAGCA AGCCAGCCGTAGATCAGAGCTCTTCTACTGTCTCAGGGTATCGAACACATCCCCACCTCCAACGCCCCAATGTTTAA
Upstream 100 bases:
>100_bases TTATGCATATAACCTTTCCAGGACGGATATAGGTTTCAACTTGTCACGCTGAGCCATATAGAGCAAAAGGCCCACCAATG ACTTCATCATGGGTGCCTAT
Downstream 100 bases:
>100_bases TCTGCTCCAGGATCAAGCGATCATTCAGCCCAACGGAGAGGGAAAAGCCATTTGGAAGGCCAGCATCGATAATGGTCGCG GCTGGAAGAACACGTTCACA
Product: relaxase
Products: NA
Alternate protein names: Helicase; DNA Helicase; Truncated TraI; Type IV Secretion-Like Conjugative Relaxase TraI; Relaxase-Related Protein; Metal Dependent Phosphohydrolase; Conjugal Transfer Protein Tral; Plasmid Conjugative Relaxase; HD-Superfamily Hydrolase; Type IV Conjugative Transfer System Protein TraI
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues MLSFFTRRKASPISSNAAAGFFKPESPDALLSTSRRRQLIENIWQRTSLPREQFEALYMQAFKSYAALVQHLPASENHHH AYHGGMLDHGLEIVAYALKIRQMYLLPIGAPPESQAAQSEAWSAASAYGALVHDLGKIAVDVKVELADGTIWHPWHGPLD QPYRFKYVKGRDYRLHGAASSLIYSHVIPAKALDWLSGFPELWSQLVFAFAFAFAGQYEHADILGEIVSQADQASVAQEL GGNPGKAMSAPKQSIQRQLAEGLRMLVADKFKLNQPDGPSDGWLTQEGLWLVSKPAVDQSSSTVSGYRTHPHLQRPNV
Sequences:
>Translated_318_residues MLSFFTRRKASPISSNAAAGFFKPESPDALLSTSRRRQLIENIWQRTSLPREQFEALYMQAFKSYAALVQHLPASENHHH AYHGGMLDHGLEIVAYALKIRQMYLLPIGAPPESQAAQSEAWSAASAYGALVHDLGKIAVDVKVELADGTIWHPWHGPLD QPYRFKYVKGRDYRLHGAASSLIYSHVIPAKALDWLSGFPELWSQLVFAFAFAFAGQYEHADILGEIVSQADQASVAQEL GGNPGKAMSAPKQSIQRQLAEGLRMLVADKFKLNQPDGPSDGWLTQEGLWLVSKPAVDQSSSTVSGYRTHPHLQRPNV >Mature_318_residues MLSFFTRRKASPISSNAAAGFFKPESPDALLSTSRRRQLIENIWQRTSLPREQFEALYMQAFKSYAALVQHLPASENHHH AYHGGMLDHGLEIVAYALKIRQMYLLPIGAPPESQAAQSEAWSAASAYGALVHDLGKIAVDVKVELADGTIWHPWHGPLD QPYRFKYVKGRDYRLHGAASSLIYSHVIPAKALDWLSGFPELWSQLVFAFAFAFAGQYEHADILGEIVSQADQASVAQEL GGNPGKAMSAPKQSIQRQLAEGLRMLVADKFKLNQPDGPSDGWLTQEGLWLVSKPAVDQSSSTVSGYRTHPHLQRPNV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35212; Mature: 35212
Theoretical pI: Translated: 8.07; Mature: 8.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSFFTRRKASPISSNAAAGFFKPESPDALLSTSRRRQLIENIWQRTSLPREQFEALYMQ CCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH AFKSYAALVQHLPASENHHHAYHGGMLDHGLEIVAYALKIRQMYLLPIGAPPESQAAQSE HHHHHHHHHHHCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHH AWSAASAYGALVHDLGKIAVDVKVELADGTIWHPWHGPLDQPYRFKYVKGRDYRLHGAAS HHHHHHHHHHHHHHHHHEEEEEEEEECCCEEECCCCCCCCCCCEEEEECCCCEEEHHHHH SLIYSHVIPAKALDWLSGFPELWSQLVFAFAFAFAGQYEHADILGEIVSQADQASVAQEL HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH GGNPGKAMSAPKQSIQRQLAEGLRMLVADKFKLNQPDGPSDGWLTQEGLWLVSKPAVDQS CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCC SSTVSGYRTHPHLQRPNV CCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLSFFTRRKASPISSNAAAGFFKPESPDALLSTSRRRQLIENIWQRTSLPREQFEALYMQ CCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH AFKSYAALVQHLPASENHHHAYHGGMLDHGLEIVAYALKIRQMYLLPIGAPPESQAAQSE HHHHHHHHHHHCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHH AWSAASAYGALVHDLGKIAVDVKVELADGTIWHPWHGPLDQPYRFKYVKGRDYRLHGAAS HHHHHHHHHHHHHHHHHEEEEEEEEECCCEEECCCCCCCCCCCEEEEECCCCEEEHHHHH SLIYSHVIPAKALDWLSGFPELWSQLVFAFAFAFAGQYEHADILGEIVSQADQASVAQEL HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH GGNPGKAMSAPKQSIQRQLAEGLRMLVADKFKLNQPDGPSDGWLTQEGLWLVSKPAVDQS CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCC SSTVSGYRTHPHLQRPNV CCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA