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The map label for this gene is yfiO [C]

Identifier: 66043990

GI number: 66043990

Start: 829295

End: 830317

Strand: Reverse

Name: yfiO [C]

Synonym: Psyr_0725

Alternate gene names: 66043990

Gene position: 830317-829295 (Counterclockwise)

Preceding gene: 66043994

Following gene: 66043989

Centisome position: 13.63

GC content: 59.73

Gene sequence:

>1023_bases
ATGCAAGTGAAACACCTGCTGCTGATCGCCATCCTCGCATTGACTGCGGCCTGTTCGTCGAAGGAAGTCATCGACGAAAA
CCTCAGCGAAGTCGAGCTGTACCAGCAGGCGCAGGCCGACCTGGGAAATAACAGCTATAACAGTGCCACTGAGAAGCTCA
AGGCGCTGGAATCTCGCTATCCGTTCGGTCGCTACGCCGATCAGGCCCAGCTCGAGTTGATCTACTCGAACTACAAGAAC
GGTGAACCCGAAGCAGCCAAATCCGCTGCCGAGCGTTTCATCCGCCTGCATCCGCAGCACCCGAACGTCGACTACGCGTA
TTACATGAAGGGCCTGACCTCCTTCGACCAGGACGTGGGCCTTCTGGCGCGCTTCCTGCCGCTGGACCAGACCAAACGTG
ACCCGGGAGCTGCCCGCGACTCGTTCAACGAGTTCGCCCAGCTGACCAGCCGCTTTCCGAACAGTCGCTATGCGCCTGAC
GCCAAGCAGCGCATGATTTACCTGCGCAACCTGCTGGCGTCCTACGAAATCCACGTAGCCGACTACTACCTGACCCGTCA
GGCCTACGTCGCCGCCGCCAACCGCGGCCGTTATGTAGTGGAAAACTTCCAGGAGACGCCTTCGGTCGGCGACGGTCTGG
CAGTGATGGTCGAGTCTTATCAGCGTCTGCACCTTGACGACCTGGCTGCCACCAGCCTGGAAGTGCTGAAGACCAACTAC
CCGAACCACCCGCAACTGGCTGACGGCAAATTCACCCCGCGTGAAGCTGAGGCCGATAACCGCTCATGGCTGTCGAAAGC
GACCCTTGGCCTGATCGACGGTAGCGCACCGCTGCCACCGGGCCAGACCCGTGCCGATCAGGACATGAAGAAGCAGTACC
AGGACGCCAAGGACTCCATTCCGAAAGAGCTGCTGCCGGAGAATCAGGCAGAGCTGGACGAACAGGCGGAAAAAGACGCC
GAAGCGAAAGGCACCAAGAGCCGTTCGTGGTTCAGCTACATGACCCTGGGTCTGTTCGACTGA

Upstream 100 bases:

>100_bases
TTAAATACGGCGTCTTTTGTCCCGCCGGTATCGCGGGGCGCTCATCATAACAGGACGGCCCCGCCCAAGACAGCAGGCCG
TTATAGGGACGCAAGCCGCC

Downstream 100 bases:

>100_bases
TCCTGAGCGCATGAAAAAAAGAGGCCTTCGGGCCTCTTTTTTTGTGCATTAATTTTGCCACTGTGCGCCCGCTCGCGGCT
TGGCTACACTGCGCCATCGT

Product: competence lipoprotein ComL, putative

Products: NA

Alternate protein names: ORFY [H]

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MQVKHLLLIAILALTAACSSKEVIDENLSEVELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLELIYSNYKN
GEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKRDPGAARDSFNEFAQLTSRFPNSRYAPD
AKQRMIYLRNLLASYEIHVADYYLTRQAYVAAANRGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNY
PNHPQLADGKFTPREAEADNRSWLSKATLGLIDGSAPLPPGQTRADQDMKKQYQDAKDSIPKELLPENQAELDEQAEKDA
EAKGTKSRSWFSYMTLGLFD

Sequences:

>Translated_340_residues
MQVKHLLLIAILALTAACSSKEVIDENLSEVELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLELIYSNYKN
GEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKRDPGAARDSFNEFAQLTSRFPNSRYAPD
AKQRMIYLRNLLASYEIHVADYYLTRQAYVAAANRGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNY
PNHPQLADGKFTPREAEADNRSWLSKATLGLIDGSAPLPPGQTRADQDMKKQYQDAKDSIPKELLPENQAELDEQAEKDA
EAKGTKSRSWFSYMTLGLFD
>Mature_340_residues
MQVKHLLLIAILALTAACSSKEVIDENLSEVELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLELIYSNYKN
GEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKRDPGAARDSFNEFAQLTSRFPNSRYAPD
AKQRMIYLRNLLASYEIHVADYYLTRQAYVAAANRGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNY
PNHPQLADGKFTPREAEADNRSWLSKATLGLIDGSAPLPPGQTRADQDMKKQYQDAKDSIPKELLPENQAELDEQAEKDA
EAKGTKSRSWFSYMTLGLFD

Specific function: Unknown

COG id: COG4105

COG function: function code R; DNA uptake lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0169 (ComL) family [H]

Homologues:

Organism=Escherichia coli, GI1788947, Length=243, Percent_Identity=39.5061728395062, Blast_Score=183, Evalue=2e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017689 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38326; Mature: 38326

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVKHLLLIAILALTAACSSKEVIDENLSEVELYQQAQADLGNNSYNSATEKLKALESRY
CCHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC
PFGRYADQAQLELIYSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVG
CCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
LLARFLPLDQTKRDPGAARDSFNEFAQLTSRFPNSRYAPDAKQRMIYLRNLLASYEIHVA
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
DYYLTRQAYVAAANRGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNY
HHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PNHPQLADGKFTPREAEADNRSWLSKATLGLIDGSAPLPPGQTRADQDMKKQYQDAKDSI
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
PKELLPENQAELDEQAEKDAEAKGTKSRSWFSYMTLGLFD
CHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MQVKHLLLIAILALTAACSSKEVIDENLSEVELYQQAQADLGNNSYNSATEKLKALESRY
CCHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC
PFGRYADQAQLELIYSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVG
CCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
LLARFLPLDQTKRDPGAARDSFNEFAQLTSRFPNSRYAPDAKQRMIYLRNLLASYEIHVA
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
DYYLTRQAYVAAANRGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNY
HHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PNHPQLADGKFTPREAEADNRSWLSKATLGLIDGSAPLPPGQTRADQDMKKQYQDAKDSI
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
PKELLPENQAELDEQAEKDAEAKGTKSRSWFSYMTLGLFD
CHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8097014; 10984043 [H]