| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is argE [H]
Identifier: 66043523
GI number: 66043523
Start: 266353
End: 267540
Strand: Direct
Name: argE [H]
Synonym: Psyr_0253
Alternate gene names: 66043523
Gene position: 266353-267540 (Clockwise)
Preceding gene: 66043521
Following gene: 66043524
Centisome position: 4.37
GC content: 63.89
Gene sequence:
>1188_bases ATGATGGGCCGTGTTCCGTCTCGATTACAGGAAGCGTCCATGCCGTTGCCGTCCATGAAAGACCAGTTCGCCGCGCTGAT CGCCGTACCCTCGGTGAGCTGCACTCAGCCTTCCCTGGACCAGAGCAACCGCCCCGTCATCGATCTGCTGGCCGGATGGC TCGGCGATCTGGGGTTTGCCTGCGACATCCAGCAAGTTTCCCCCGGCAAGTTCAATCTGCTGGCGACCTACGGTACAGGC CCGGGCGGCCTGGTACTGGCGGGGCACAGCGATACCGTGCCGTTCGACGAGGCACTGTGGAAAACCGACCCCTTGAAGCT GACCGAGGTGGATGGCCGCTGGGTCGGGCTGGGCAGTTGTGACATGAAGGGCTTCTTTGCGCTGGTCATCGAAGCGGTGC GTGGCCTTCTTGACCAGCCGTTCAAGCAGCCGCTGCTGATCCTCGCCACCTGCGACGAGGAAAGCTCGATGGCCGGTGCC CGCGCGCTGGCCGACGCCGGACGCCCGCTGGGTCGTGCGGCAGTGATTGGCGAGCCGACCGGGCTCAAGCCGATCCGCCT GCATAAGGGCGTGATGATGGAGCGCATCGATATTCTCGGGCGCAGCGGTCATTCCTCCGACCCGAGCCTCGGGCACAGCG CACTCGAAGCCATGCACGACGCCATCAGCGAACTCAAGGGCCTGCGCACGCAGTGGCAGGCGAAGTACCGCAACCCGCAA TTCACGGTGCCGCAGCCGACGCTGAACCTGGGCTGTATTCATGGCGGCGACAACCCGAACCGGATTTGTGGCCAGTGCTC GCTGGAGTTCGACCTGCGTCCGCTGCCGGGCATGGACCCGGAGATGCTGCGCTCGGCGATTCGGCAGAAGCTGCAGCCGC TGGCCGAGCTGCACCAGGTACAGATCGACTACGCACCGCTGTTCCCCGAATGTGCGCCGTTCGAGCAGATCGCTGACGCT GAACTTGTGCGTGTCGCTGAACGTCTGACCGGTCATACCGCTGCCGCAGTAGCATTCGGCACCGAAGCGCCTTATCTTCA GCGCCTCGGCTGCGAGACACTGGTGCTCGGCCCGGGCGACATCGCCTGTGCGCATCAGCCGGGGGAATACCTCGAAATGT CACGTCTTGACCCTACAGTGCGTCTGTTACGTCAACTGATCGAACATTACTGCCTGACGCCCCAGTGA
Upstream 100 bases:
>100_bases ACGGATAAACGGGAGCGCAGCCCATGATTGAACGGCTGCTGAGGCCGTCAGTGTACAGGACATGGCCCGAAACGGTTTAT TCCTGGGTTGCTATGGCCCT
Downstream 100 bases:
>100_bases GTCAGGCATACCCCGTGTTTGTTAATCAAAGCATCTTGAGTAAAAGGAGACTGCGCGTGCTGCCAAGCCTGTTCCGACGA TAACCACCACACCGTTGTGC
Product: acetylornithine deacetylase
Products: NA
Alternate protein names: AO; Acetylornithinase; N-acetylornithinase; NAO [H]
Number of amino acids: Translated: 395; Mature: 395
Protein sequence:
>395_residues MMGRVPSRLQEASMPLPSMKDQFAALIAVPSVSCTQPSLDQSNRPVIDLLAGWLGDLGFACDIQQVSPGKFNLLATYGTG PGGLVLAGHSDTVPFDEALWKTDPLKLTEVDGRWVGLGSCDMKGFFALVIEAVRGLLDQPFKQPLLILATCDEESSMAGA RALADAGRPLGRAAVIGEPTGLKPIRLHKGVMMERIDILGRSGHSSDPSLGHSALEAMHDAISELKGLRTQWQAKYRNPQ FTVPQPTLNLGCIHGGDNPNRICGQCSLEFDLRPLPGMDPEMLRSAIRQKLQPLAELHQVQIDYAPLFPECAPFEQIADA ELVRVAERLTGHTAAAVAFGTEAPYLQRLGCETLVLGPGDIACAHQPGEYLEMSRLDPTVRLLRQLIEHYCLTPQ
Sequences:
>Translated_395_residues MMGRVPSRLQEASMPLPSMKDQFAALIAVPSVSCTQPSLDQSNRPVIDLLAGWLGDLGFACDIQQVSPGKFNLLATYGTG PGGLVLAGHSDTVPFDEALWKTDPLKLTEVDGRWVGLGSCDMKGFFALVIEAVRGLLDQPFKQPLLILATCDEESSMAGA RALADAGRPLGRAAVIGEPTGLKPIRLHKGVMMERIDILGRSGHSSDPSLGHSALEAMHDAISELKGLRTQWQAKYRNPQ FTVPQPTLNLGCIHGGDNPNRICGQCSLEFDLRPLPGMDPEMLRSAIRQKLQPLAELHQVQIDYAPLFPECAPFEQIADA ELVRVAERLTGHTAAAVAFGTEAPYLQRLGCETLVLGPGDIACAHQPGEYLEMSRLDPTVRLLRQLIEHYCLTPQ >Mature_395_residues MMGRVPSRLQEASMPLPSMKDQFAALIAVPSVSCTQPSLDQSNRPVIDLLAGWLGDLGFACDIQQVSPGKFNLLATYGTG PGGLVLAGHSDTVPFDEALWKTDPLKLTEVDGRWVGLGSCDMKGFFALVIEAVRGLLDQPFKQPLLILATCDEESSMAGA RALADAGRPLGRAAVIGEPTGLKPIRLHKGVMMERIDILGRSGHSSDPSLGHSALEAMHDAISELKGLRTQWQAKYRNPQ FTVPQPTLNLGCIHGGDNPNRICGQCSLEFDLRPLPGMDPEMLRSAIRQKLQPLAELHQVQIDYAPLFPECAPFEQIADA ELVRVAERLTGHTAAAVAFGTEAPYLQRLGCETLVLGPGDIACAHQPGEYLEMSRLDPTVRLLRQLIEHYCLTPQ
Specific function: Displays A Broad Specificity And Can Also Deacylate Substrates Such As Acetylarginine, Acetylhistidine Or Acetylglutamate Semialdehyde. [C]
COG id: COG0624
COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M20A family. ArgE subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790395, Length=378, Percent_Identity=49.7354497354497, Blast_Score=358, Evalue=1e-100, Organism=Escherichia coli, GI1788816, Length=389, Percent_Identity=24.9357326478149, Blast_Score=70, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010169 - InterPro: IPR001261 - InterPro: IPR002933 - InterPro: IPR011650 [H]
Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]
EC number: =3.5.1.16 [H]
Molecular weight: Translated: 42825; Mature: 42825
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: PS00759 ARGE_DAPE_CPG2_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMGRVPSRLQEASMPLPSMKDQFAALIAVPSVSCTQPSLDQSNRPVIDLLAGWLGDLGFA CCCCCHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCE CDIQQVSPGKFNLLATYGTGPGGLVLAGHSDTVPFDEALWKTDPLKLTEVDGRWVGLGSC EECCCCCCCCEEEEEEECCCCCCEEEECCCCCCCHHHHHCCCCCEEEEECCCCEEECCCC DMKGFFALVIEAVRGLLDQPFKQPLLILATCDEESSMAGARALADAGRPLGRAAVIGEPT CHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCEEEECCCC GLKPIRLHKGVMMERIDILGRSGHSSDPSLGHSALEAMHDAISELKGLRTQWQAKYRNPQ CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC FTVPQPTLNLGCIHGGDNPNRICGQCSLEFDLRPLPGMDPEMLRSAIRQKLQPLAELHQV EECCCCCCEEEEEECCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHE QIDYAPLFPECAPFEQIADAELVRVAERLTGHTAAAVAFGTEAPYLQRLGCETLVLGPGD ECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHEEEEECCCCHHHHHCCCCEEEECCCC IACAHQPGEYLEMSRLDPTVRLLRQLIEHYCLTPQ EEECCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MMGRVPSRLQEASMPLPSMKDQFAALIAVPSVSCTQPSLDQSNRPVIDLLAGWLGDLGFA CCCCCHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCE CDIQQVSPGKFNLLATYGTGPGGLVLAGHSDTVPFDEALWKTDPLKLTEVDGRWVGLGSC EECCCCCCCCEEEEEEECCCCCCEEEECCCCCCCHHHHHCCCCCEEEEECCCCEEECCCC DMKGFFALVIEAVRGLLDQPFKQPLLILATCDEESSMAGARALADAGRPLGRAAVIGEPT CHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCEEEECCCC GLKPIRLHKGVMMERIDILGRSGHSSDPSLGHSALEAMHDAISELKGLRTQWQAKYRNPQ CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC FTVPQPTLNLGCIHGGDNPNRICGQCSLEFDLRPLPGMDPEMLRSAIRQKLQPLAELHQV EECCCCCCEEEEEECCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHE QIDYAPLFPECAPFEQIADAELVRVAERLTGHTAAAVAFGTEAPYLQRLGCETLVLGPGD ECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHEEEEECCCCHHHHHCCCCEEEECCCC IACAHQPGEYLEMSRLDPTVRLLRQLIEHYCLTPQ EEECCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10692366 [H]