| Definition | Vibrio fischeri ES114 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_006841 |
| Length | 1,330,333 |
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The map label for this gene is 59714258
Identifier: 59714258
GI number: 59714258
Start: 1213688
End: 1214767
Strand: Reverse
Name: 59714258
Synonym: VF_A1075
Alternate gene names: NA
Gene position: 1214767-1213688 (Counterclockwise)
Preceding gene: 59714259
Following gene: 59714254
Centisome position: 91.31
GC content: 33.98
Gene sequence:
>1080_bases ATGATTAAACTTAAAAATATCCTTCGTAATTTTGACCGATATAGAAGAACTAAGATGGCAGTTTTGGAGCCCTTATTATA TCGATTATTAAATAATACACATGGTCAACTATCTTATCTTTTGGATAAAGATGACATCCAACATATTCTAATAATTCGTA ATAATCGTCGTATAGGAAATATGTATTTCCTTATTCCTTTTATTCGCCAGATGCGTAGAAGTTATCCTGATGCTCATATT ACTTTAATGTTAAATCAGCCTTGGCAGAGAGATGTTTTTCGTTATATTGGTGTGGATGAGTTTGTATTTTCTTATTTTTC TATAAGAGAGTTTGGTAAGTTTGCTCGTATTATGAAAGGGCAAAGAAAAAAGGAATATGATGTTATTATATTGCCTTATT CTTCAGTTGAAGATACGTTGATAACAGCCATGTTAAGAGCTAAAAATAAAATTTCGGGTGACAATGCTCGACGAAATGTG GCGTTTACGCACACATTCAAAAAAGATGACGATAGATTACACGCTGCATTTAGTTGTCTTTATTTGCTTTCTGCGTTGGG CAATAGGCTTCCTTCTTCTATTTCACATCATTTAGTCTTTTCTCAAAAAGAGTTGAATGATGGGGTCTCAGCAAAAAAAC ATCTTTATCAAGGTGAACAATTGTGTCTTGCGTATTTTCGGGGGGCAAGAGGGGATAAGAGGTTACCTGATTCAACTTGG TTAACGCTTATTAATAAATTTGAAAATAAATTTCCACAACCTATTCAATGGGTGGAGATATTGAGTCCTGATATTACCAC TCCATTACGGGAGGGTACGGTGACATTTAAAACGACAGACATGCGTCACCTTGCTTGCGTATTAAAAGAAATGGATGCCT TTATTTGTTGTGATACGGGGCCACTTCATCTCGCTGATGCAGCAGGAGTTTCTTGTATAGGATTATATAACAAAACTAAC CCAGAAGTTTTTGGTGTTGTAGGGAATAATTCTATTAACACTACAGATATTAGTAATATCAATATAGATAGTATTTTTAC AGTATTAATGGATGATAGAAATAGAAGTTTAATATCGTGA
Upstream 100 bases:
>100_bases AAGATGCTTATTACTTATTAATCCAATTAGGTATTGGTTACTTTCAGGGTTTTAAATTTGGAAGACCGCTACTTATTCCT TAAAATAAAATTATTTATGT
Downstream 100 bases:
>100_bases ACAGTTTTAATAAATGATTATTTAATACTTTAGAATAAATAAAATTATCTCATATAGTATGAACCTAAGAGTTTAGCTAC ATGAATAAATTTATTTTATG
Product: heptosyltransferase
Products: NA
Alternate protein names: Heptosyltransferase; Glycosyl Transferase Family Protein
Number of amino acids: Translated: 359; Mature: 359
Protein sequence:
>359_residues MIKLKNILRNFDRYRRTKMAVLEPLLYRLLNNTHGQLSYLLDKDDIQHILIIRNNRRIGNMYFLIPFIRQMRRSYPDAHI TLMLNQPWQRDVFRYIGVDEFVFSYFSIREFGKFARIMKGQRKKEYDVIILPYSSVEDTLITAMLRAKNKISGDNARRNV AFTHTFKKDDDRLHAAFSCLYLLSALGNRLPSSISHHLVFSQKELNDGVSAKKHLYQGEQLCLAYFRGARGDKRLPDSTW LTLINKFENKFPQPIQWVEILSPDITTPLREGTVTFKTTDMRHLACVLKEMDAFICCDTGPLHLADAAGVSCIGLYNKTN PEVFGVVGNNSINTTDISNINIDSIFTVLMDDRNRSLIS
Sequences:
>Translated_359_residues MIKLKNILRNFDRYRRTKMAVLEPLLYRLLNNTHGQLSYLLDKDDIQHILIIRNNRRIGNMYFLIPFIRQMRRSYPDAHI TLMLNQPWQRDVFRYIGVDEFVFSYFSIREFGKFARIMKGQRKKEYDVIILPYSSVEDTLITAMLRAKNKISGDNARRNV AFTHTFKKDDDRLHAAFSCLYLLSALGNRLPSSISHHLVFSQKELNDGVSAKKHLYQGEQLCLAYFRGARGDKRLPDSTW LTLINKFENKFPQPIQWVEILSPDITTPLREGTVTFKTTDMRHLACVLKEMDAFICCDTGPLHLADAAGVSCIGLYNKTN PEVFGVVGNNSINTTDISNINIDSIFTVLMDDRNRSLIS >Mature_359_residues MIKLKNILRNFDRYRRTKMAVLEPLLYRLLNNTHGQLSYLLDKDDIQHILIIRNNRRIGNMYFLIPFIRQMRRSYPDAHI TLMLNQPWQRDVFRYIGVDEFVFSYFSIREFGKFARIMKGQRKKEYDVIILPYSSVEDTLITAMLRAKNKISGDNARRNV AFTHTFKKDDDRLHAAFSCLYLLSALGNRLPSSISHHLVFSQKELNDGVSAKKHLYQGEQLCLAYFRGARGDKRLPDSTW LTLINKFENKFPQPIQWVEILSPDITTPLREGTVTFKTTDMRHLACVLKEMDAFICCDTGPLHLADAAGVSCIGLYNKTN PEVFGVVGNNSINTTDISNINIDSIFTVLMDDRNRSLIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41526; Mature: 41526
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKLKNILRNFDRYRRTKMAVLEPLLYRLLNNTHGQLSYLLDKDDIQHILIIRNNRRIGN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEEECCCCCCH MYFLIPFIRQMRRSYPDAHITLMLNQPWQRDVFRYIGVDEFVFSYFSIREFGKFARIMKG HEEHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC QRKKEYDVIILPYSSVEDTLITAMLRAKNKISGDNARRNVAFTHTFKKDDDRLHAAFSCL CCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHH YLLSALGNRLPSSISHHLVFSQKELNDGVSAKKHLYQGEQLCLAYFRGARGDKRLPDSTW HHHHHHHHHCCHHHHHHHEEEHHHHCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHH LTLINKFENKFPQPIQWVEILSPDITTPLREGTVTFKTTDMRHLACVLKEMDAFICCDTG HHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHCCCEEEECCC PLHLADAAGVSCIGLYNKTNPEVFGVVGNNSINTTDISNINIDSIFTVLMDDRNRSLIS CCEEHHCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCHHHHEEEEECCCCCCCCC >Mature Secondary Structure MIKLKNILRNFDRYRRTKMAVLEPLLYRLLNNTHGQLSYLLDKDDIQHILIIRNNRRIGN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEEECCCCCCH MYFLIPFIRQMRRSYPDAHITLMLNQPWQRDVFRYIGVDEFVFSYFSIREFGKFARIMKG HEEHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC QRKKEYDVIILPYSSVEDTLITAMLRAKNKISGDNARRNVAFTHTFKKDDDRLHAAFSCL CCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHH YLLSALGNRLPSSISHHLVFSQKELNDGVSAKKHLYQGEQLCLAYFRGARGDKRLPDSTW HHHHHHHHHCCHHHHHHHEEEHHHHCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHH LTLINKFENKFPQPIQWVEILSPDITTPLREGTVTFKTTDMRHLACVLKEMDAFICCDTG HHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHCCCEEEECCC PLHLADAAGVSCIGLYNKTNPEVFGVVGNNSINTTDISNINIDSIFTVLMDDRNRSLIS CCEEHHCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCHHHHEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA