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The map label for this gene is ygiW [H]

Identifier: 59714224

GI number: 59714224

Start: 1175153

End: 1175524

Strand: Reverse

Name: ygiW [H]

Synonym: VF_A1041

Alternate gene names: 59714224

Gene position: 1175524-1175153 (Counterclockwise)

Preceding gene: 59714225

Following gene: 59714202

Centisome position: 88.36

GC content: 31.45

Gene sequence:

>372_bases
ATGAAAAAAAGACATTTGTTATTTACACTAATATTAGCTTGTTCATCAACGCTTGCATTGGCTAATGATCAAGCTGCTAA
TTATCAGGATGAATTCTCTAAACCTGTTGATGGAATAAATAGCGTAGAATCGGTATTAAATGCCAGCGCCGTTATTGATG
ACACACCTATCCTATTAACAGGGTATTTAATTGAGCCTCTAGGAAAGGAAGTGTATGTATTTAAAGATAATACAGGTTCT
TTAAATGTAAAAATTGATGGTGATAAAATGTCTGGTTTACAAGTGAAACCAAACGATAAAGTGACGATCAAAGGTGAAGT
AAATAAAGAAGATAATTATATTATTTATGTCGATAGTGTGACTATTGATTAA

Upstream 100 bases:

>100_bases
ATTAAAACTACTATATATTTATAACTTATTTTGATCATAATTAAATTGAGTTACAAATGTTAATGTAGTTATTCATATAA
TAATAGTTAAGGTTTTATTT

Downstream 100 bases:

>100_bases
TATAAATTAATTATTTTGAAAAATATTATCTTCTTGTGGAGAGTGTTTTTAAATTTATGATTATGTGAAAAAATGGAGCT
TATAAATAAGCTCCATTTTT

Product: protein YgiW precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MKKRHLLFTLILACSSTLALANDQAANYQDEFSKPVDGINSVESVLNASAVIDDTPILLTGYLIEPLGKEVYVFKDNTGS
LNVKIDGDKMSGLQVKPNDKVTIKGEVNKEDNYIIYVDSVTID

Sequences:

>Translated_123_residues
MKKRHLLFTLILACSSTLALANDQAANYQDEFSKPVDGINSVESVLNASAVIDDTPILLTGYLIEPLGKEVYVFKDNTGS
LNVKIDGDKMSGLQVKPNDKVTIKGEVNKEDNYIIYVDSVTID
>Mature_123_residues
MKKRHLLFTLILACSSTLALANDQAANYQDEFSKPVDGINSVESVLNASAVIDDTPILLTGYLIEPLGKEVYVFKDNTGS
LNVKIDGDKMSGLQVKPNDKVTIKGEVNKEDNYIIYVDSVTID

Specific function: Unknown

COG id: COG3111

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1709 [H]

Homologues:

Organism=Escherichia coli, GI1789401, Length=124, Percent_Identity=34.6774193548387, Blast_Score=68, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016052
- InterPro:   IPR005220 [H]

Pfam domain/function: PF04076 BOF [H]

EC number: NA

Molecular weight: Translated: 13480; Mature: 13480

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRHLLFTLILACSSTLALANDQAANYQDEFSKPVDGINSVESVLNASAVIDDTPILLT
CCCHHHHHHHHHHHCCCEEECCCCCCCCHHHHCCCCCCHHHHHHHHCCCEEECCCCEEEE
GYLIEPLGKEVYVFKDNTGSLNVKIDGDKMSGLQVKPNDKVTIKGEVNKEDNYIIYVDSV
EEEECCCCCEEEEEECCCCEEEEEECCCCCCCEEECCCCCEEEEEECCCCCCEEEEEEEE
TID
EEC
>Mature Secondary Structure
MKKRHLLFTLILACSSTLALANDQAANYQDEFSKPVDGINSVESVLNASAVIDDTPILLT
CCCHHHHHHHHHHHCCCEEECCCCCCCCHHHHCCCCCCHHHHHHHHCCCEEECCCCEEEE
GYLIEPLGKEVYVFKDNTGSLNVKIDGDKMSGLQVKPNDKVTIKGEVNKEDNYIIYVDSV
EEEECCCCCEEEEEECCCCEEEEEECCCCCCCEEECCCCCEEEEEECCCCCCEEEEEEEE
TID
EEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]