| Definition | Vibrio fischeri ES114 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_006841 |
| Length | 1,330,333 |
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The map label for this gene is 59714202
Identifier: 59714202
GI number: 59714202
Start: 1147075
End: 1149189
Strand: Reverse
Name: 59714202
Synonym: VF_A1019
Alternate gene names: NA
Gene position: 1149189-1147075 (Counterclockwise)
Preceding gene: 59714224
Following gene: 59714201
Centisome position: 86.38
GC content: 38.2
Gene sequence:
>2115_bases ATGTATCAATTTTTTAAGATAACAATGCTAATACTTTTATTAGTCAGCTCAAAAGTGTTTGCTGTTGCTTTTGATTCGTG TCCAAGTAAGGCGTATTTATTTCAAGGTAAACCTGTGTCTGTCTATGGTATTAATTTAGTTACCGGGACTAATAGTCTTT TGCAAGATGATACGGGATTATCTTCTAATATAAATGGGGTTGGTTTTAATGAGACTGACCGATATATTTATGGTTTTGAT ACGACGAATTATAACGTGGTTCGGTTAGGGCAAAACTTTCAAGCAACGACGTTAAATGTAAATGGGTTACCTTCGGATAA AACATTTTATGTCGGTGATGTATATGACCACCATTACTATGTATATCGTAGTGGAACGGGTCTATATAAGATCGATTTAT CTCCTTTAGATTCGAATGTGAACTCCACTCTAACGGCGCAGTTAATTACTTCAACTGCGTCTGTGTCATTAACGGATTTT GCTTTTCACCCAAGTAACAGTCGTTTATATGGGGTAGATAATGGTAGTGGTGGATTATATGAATTTGATATCAATACAGG CGCTGCGACTTATATTGGTGATACTGGTGAATTAGGTACCTTTGGTGCTATGTATTTTGATGTTGATGGTTATTTATATT TATCACGTAACCAAGACGGTCAAATTTATCGAGTGAATTTATCTACTCAAGCGATCATTGATTCAGGTGTTGTACCTGCA ATCAAGTTTGCTGATGGTCCTTATTCTAATCAAAATGATGGTGCCCGTTGTGCTAATGCACCTCTTATTGATACAGATGA ACCAGCTACGATAGATTTTGGTGATGCTCCAGATACTAACTATGGAACAACATTAGCTGCTAATGGTGCTCGTCATGAAA TGGATGGAGTCACATGGCTAGGTGCTTCAGTTGATGGTGATTATTATGCAGCGCAATCTCCAGATTCAGATGATTCAATT ACCAGTGATGATGAAGATGGTGTGGGGTTTGTTACGGCTATAGAACCGGGACTTGATTCTGTTATTACAGTGAACGCCTC TACAACAGGTTATTTATCTGCTTGGTTTGATTGGAACGATGATGGTGATTTTTCTGATGATGGTGAACAAGTTATTACAG ATAAAACTCTGGTAGCTGGTAGTAATAATTTAGTTATCAGTGTGCCATTTGGCGCTACGGTTGGTGAAACTTGGTCAAGA TTCCGTTTCAGTCAACAAACTGGATTAGCTTATTATGGTGGTTCAACTTCAGGTGAAGTGGAGGATCATGTTGTTACTAT CGTTGATGCAAATACATCACAACGTCATTTCCCATCAGCAGATGGTTACGTAACAATTGCTTATGAGGATAATTGGCCAG AAACTGCTGATTACGATATGAATGATATGGTTTTGAGATATCGAATCACTGAAACATTAAAAGATGGCGATGTTGCCAAA GTGAGTATTAGTGGTCAGTTAGTTGCCGTTGGTGCAAGTTATCACAGTGGTTTTGCTGTACGATTAGCCGGAATTGATGC AACTAATATCGATTCAGATAAGACTCGCTTATATTACAATTCAGCATTGCAAGATGGTAATGCTCAAGAATCAGGAATGA CAGAAGCAAGCTTTATTGTGATTAATGATGCAATTGAAGTTTCAAGTTATAACTGTTATTTCTTTAGAACGTTGGATGAT TGTCGAGAAGATGTCGGCGTTGAGTTTGAATTGAACTTTAGCCTAATTACTCCAGTTACAACAGGTAGTATGCCTGCAAT GCCTTATGACCCATTCTTATATGCGACTCCTGGCTTTTATCATGGTCCAAGTTTTGCTCAAGCACCAGGACGAAGCTACG AGGTTCATTTAGCTGATCAAGCTCCGACTGAGAAATTTGATACTAATTTTTATCAGTTAGCCGAAGATACCAGTGATCCT AATACGTCTCGTTATTTTAAAACCAGTAATAATATGCCTTGGGCTCTGCTTATTTATGATGAGTGGAAATGGCCAAGAGA GCGTGTTGATTTAGCTGTGGCATATCCTCAATTCGCAGACTATACGACGTCAGGCGGTGGAACTCATACTGATTGGTATG ACATCACTAATGCAATTGCGAACAAATACTATTAA
Upstream 100 bases:
>100_bases GTGATTCCTAAGATTTATTATCTTTTAAATCAACGCCTTATATATGGCATGGCTTTTGTATAGTTATAAAAAGTAACATC ATAACTATAAGGAAGAAGCT
Downstream 100 bases:
>100_bases AAAGGGAGTTATTATGAAAAAAGTTATTATGATATCAATGACATCGTTAGCATCGCTGTTTTTAATAGTTTCATGTAGTG ATAGTGGAGGTTTCTCATCT
Product: putative cytoplasmic protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 704; Mature: 704
Protein sequence:
>704_residues MYQFFKITMLILLLVSSKVFAVAFDSCPSKAYLFQGKPVSVYGINLVTGTNSLLQDDTGLSSNINGVGFNETDRYIYGFD TTNYNVVRLGQNFQATTLNVNGLPSDKTFYVGDVYDHHYYVYRSGTGLYKIDLSPLDSNVNSTLTAQLITSTASVSLTDF AFHPSNSRLYGVDNGSGGLYEFDINTGAATYIGDTGELGTFGAMYFDVDGYLYLSRNQDGQIYRVNLSTQAIIDSGVVPA IKFADGPYSNQNDGARCANAPLIDTDEPATIDFGDAPDTNYGTTLAANGARHEMDGVTWLGASVDGDYYAAQSPDSDDSI TSDDEDGVGFVTAIEPGLDSVITVNASTTGYLSAWFDWNDDGDFSDDGEQVITDKTLVAGSNNLVISVPFGATVGETWSR FRFSQQTGLAYYGGSTSGEVEDHVVTIVDANTSQRHFPSADGYVTIAYEDNWPETADYDMNDMVLRYRITETLKDGDVAK VSISGQLVAVGASYHSGFAVRLAGIDATNIDSDKTRLYYNSALQDGNAQESGMTEASFIVINDAIEVSSYNCYFFRTLDD CREDVGVEFELNFSLITPVTTGSMPAMPYDPFLYATPGFYHGPSFAQAPGRSYEVHLADQAPTEKFDTNFYQLAEDTSDP NTSRYFKTSNNMPWALLIYDEWKWPRERVDLAVAYPQFADYTTSGGGTHTDWYDITNAIANKYY
Sequences:
>Translated_704_residues MYQFFKITMLILLLVSSKVFAVAFDSCPSKAYLFQGKPVSVYGINLVTGTNSLLQDDTGLSSNINGVGFNETDRYIYGFD TTNYNVVRLGQNFQATTLNVNGLPSDKTFYVGDVYDHHYYVYRSGTGLYKIDLSPLDSNVNSTLTAQLITSTASVSLTDF AFHPSNSRLYGVDNGSGGLYEFDINTGAATYIGDTGELGTFGAMYFDVDGYLYLSRNQDGQIYRVNLSTQAIIDSGVVPA IKFADGPYSNQNDGARCANAPLIDTDEPATIDFGDAPDTNYGTTLAANGARHEMDGVTWLGASVDGDYYAAQSPDSDDSI TSDDEDGVGFVTAIEPGLDSVITVNASTTGYLSAWFDWNDDGDFSDDGEQVITDKTLVAGSNNLVISVPFGATVGETWSR FRFSQQTGLAYYGGSTSGEVEDHVVTIVDANTSQRHFPSADGYVTIAYEDNWPETADYDMNDMVLRYRITETLKDGDVAK VSISGQLVAVGASYHSGFAVRLAGIDATNIDSDKTRLYYNSALQDGNAQESGMTEASFIVINDAIEVSSYNCYFFRTLDD CREDVGVEFELNFSLITPVTTGSMPAMPYDPFLYATPGFYHGPSFAQAPGRSYEVHLADQAPTEKFDTNFYQLAEDTSDP NTSRYFKTSNNMPWALLIYDEWKWPRERVDLAVAYPQFADYTTSGGGTHTDWYDITNAIANKYY >Mature_704_residues MYQFFKITMLILLLVSSKVFAVAFDSCPSKAYLFQGKPVSVYGINLVTGTNSLLQDDTGLSSNINGVGFNETDRYIYGFD TTNYNVVRLGQNFQATTLNVNGLPSDKTFYVGDVYDHHYYVYRSGTGLYKIDLSPLDSNVNSTLTAQLITSTASVSLTDF AFHPSNSRLYGVDNGSGGLYEFDINTGAATYIGDTGELGTFGAMYFDVDGYLYLSRNQDGQIYRVNLSTQAIIDSGVVPA IKFADGPYSNQNDGARCANAPLIDTDEPATIDFGDAPDTNYGTTLAANGARHEMDGVTWLGASVDGDYYAAQSPDSDDSI TSDDEDGVGFVTAIEPGLDSVITVNASTTGYLSAWFDWNDDGDFSDDGEQVITDKTLVAGSNNLVISVPFGATVGETWSR FRFSQQTGLAYYGGSTSGEVEDHVVTIVDANTSQRHFPSADGYVTIAYEDNWPETADYDMNDMVLRYRITETLKDGDVAK VSISGQLVAVGASYHSGFAVRLAGIDATNIDSDKTRLYYNSALQDGNAQESGMTEASFIVINDAIEVSSYNCYFFRTLDD CREDVGVEFELNFSLITPVTTGSMPAMPYDPFLYATPGFYHGPSFAQAPGRSYEVHLADQAPTEKFDTNFYQLAEDTSDP NTSRYFKTSNNMPWALLIYDEWKWPRERVDLAVAYPQFADYTTSGGGTHTDWYDITNAIANKYY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 77109; Mature: 77109
Theoretical pI: Translated: 3.94; Mature: 3.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYQFFKITMLILLLVSSKVFAVAFDSCPSKAYLFQGKPVSVYGINLVTGTNSLLQDDTGL CCCHHHHHHHHHHHHCCCEEEEEECCCCCCEEEECCCCEEEEEEEEEECCCHHHCCCCCC SSNINGVGFNETDRYIYGFDTTNYNVVRLGQNFQATTLNVNGLPSDKTFYVGDVYDHHYY CCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCEEEEEEEECCEEE VYRSGTGLYKIDLSPLDSNVNSTLTAQLITSTASVSLTDFAFHPSNSRLYGVDNGSGGLY EEECCCEEEEEECCCCCCCCCCEEEEEEEECCCEEEEEEEEECCCCCEEEEEECCCCCEE EFDINTGAATYIGDTGELGTFGAMYFDVDGYLYLSRNQDGQIYRVNLSTQAIIDSGVVPA EEECCCCCEEEECCCCCCCCEEEEEEEECCEEEEEECCCCCEEEEECCHHEEECCCCCCE IKFADGPYSNQNDGARCANAPLIDTDEPATIDFGDAPDTNYGTTLAANGARHEMDGVTWL EEECCCCCCCCCCCCEECCCCEECCCCCCEEECCCCCCCCCCCEEEECCCCCCCCCEEEE GASVDGDYYAAQSPDSDDSITSDDEDGVGFVTAIEPGLDSVITVNASTTGYLSAWFDWND ECCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCEEEEEEEECCC DGDFSDDGEQVITDKTLVAGSNNLVISVPFGATVGETWSRFRFSQQTGLAYYGGSTSGEV CCCCCCCCCEEEECEEEEECCCCEEEEECCCCCHHCHHHHEEECCCCCEEEECCCCCCCC EDHVVTIVDANTSQRHFPSADGYVTIAYEDNWPETADYDMNDMVLRYRITETLKDGDVAK CCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEEEHHCCCCCEEE VSISGQLVAVGASYHSGFAVRLAGIDATNIDSDKTRLYYNSALQDGNAQESGMTEASFIV EEECCEEEEEECCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEE INDAIEVSSYNCYFFRTLDDCREDVGVEFELNFSLITPVTTGSMPAMPYDPFLYATPGFY EECEEEECCEEEEEEECHHHHHHHCCEEEEEEEEEEEEEECCCCCCCCCCCEEEECCCCC HGPSFAQAPGRSYEVHLADQAPTEKFDTNFYQLAEDTSDPNTSRYFKTSNNMPWALLIYD CCCCHHCCCCCEEEEEECCCCCCCHHCCCCEEEECCCCCCCCCEEEEECCCCCEEEEEEE EWKWPRERVDLAVAYPQFADYTTSGGGTHTDWYDITNAIANKYY CCCCCHHHEEEEEECCCCCCEECCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MYQFFKITMLILLLVSSKVFAVAFDSCPSKAYLFQGKPVSVYGINLVTGTNSLLQDDTGL CCCHHHHHHHHHHHHCCCEEEEEECCCCCCEEEECCCCEEEEEEEEEECCCHHHCCCCCC SSNINGVGFNETDRYIYGFDTTNYNVVRLGQNFQATTLNVNGLPSDKTFYVGDVYDHHYY CCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCEEEEEEEECCEEE VYRSGTGLYKIDLSPLDSNVNSTLTAQLITSTASVSLTDFAFHPSNSRLYGVDNGSGGLY EEECCCEEEEEECCCCCCCCCCEEEEEEEECCCEEEEEEEEECCCCCEEEEEECCCCCEE EFDINTGAATYIGDTGELGTFGAMYFDVDGYLYLSRNQDGQIYRVNLSTQAIIDSGVVPA EEECCCCCEEEECCCCCCCCEEEEEEEECCEEEEEECCCCCEEEEECCHHEEECCCCCCE IKFADGPYSNQNDGARCANAPLIDTDEPATIDFGDAPDTNYGTTLAANGARHEMDGVTWL EEECCCCCCCCCCCCEECCCCEECCCCCCEEECCCCCCCCCCCEEEECCCCCCCCCEEEE GASVDGDYYAAQSPDSDDSITSDDEDGVGFVTAIEPGLDSVITVNASTTGYLSAWFDWND ECCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCEEEEEEEECCC DGDFSDDGEQVITDKTLVAGSNNLVISVPFGATVGETWSRFRFSQQTGLAYYGGSTSGEV CCCCCCCCCEEEECEEEEECCCCEEEEECCCCCHHCHHHHEEECCCCCEEEECCCCCCCC EDHVVTIVDANTSQRHFPSADGYVTIAYEDNWPETADYDMNDMVLRYRITETLKDGDVAK CCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEEEHHCCCCCEEE VSISGQLVAVGASYHSGFAVRLAGIDATNIDSDKTRLYYNSALQDGNAQESGMTEASFIV EEECCEEEEEECCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEE INDAIEVSSYNCYFFRTLDDCREDVGVEFELNFSLITPVTTGSMPAMPYDPFLYATPGFY EECEEEECCEEEEEEECHHHHHHHCCEEEEEEEEEEEEEECCCCCCCCCCCEEEECCCCC HGPSFAQAPGRSYEVHLADQAPTEKFDTNFYQLAEDTSDPNTSRYFKTSNNMPWALLIYD CCCCHHCCCCCEEEEEECCCCCCCHHCCCCEEEECCCCCCCCCEEEEECCCCCEEEEEEE EWKWPRERVDLAVAYPQFADYTTSGGGTHTDWYDITNAIANKYY CCCCCHHHEEEEEECCCCCCEECCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA