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The map label for this gene is tcpQ

Identifier: 59714056

GI number: 59714056

Start: 985183

End: 985695

Strand: Reverse

Name: tcpQ

Synonym: VF_A0873

Alternate gene names: NA

Gene position: 985695-985183 (Counterclockwise)

Preceding gene: 59714057

Following gene: 59714055

Centisome position: 74.09

GC content: 29.24

Gene sequence:

>513_bases
ATGAAAAAAAATATAATTTTAATTACTTTAGCTATTATGTCATCGGGGTGTTCATCGATTGAAAGCCTGAAAACAGATAA
AGGAAATCCTAGTTATTCTAGTTTTTCGGATTGGAGAAATAAGCAGGTAAATACGACAATTAATGAGGAAAATAAGCCTG
TGAATAGCACTTTTTCTGTAGTTGTAGATGAATCATATAACCCAAAGGATACTATGGAAAATAATGAATCATCTTTATCG
TCCGTTGACATAGAAAGTAAATTTGTATTGACAGCTCAAGAGGGCGAATCATTAAAAAATAGGTTATTAGATTTTCTCTC
TAATAATGGATACAAAATGATTTGGAACTCTCAATATGACGTTTTGTTCGATAATGATATTATATATGAGGGAGATGAAG
CTCTGGACGTAGTGAAAAATATATCTGATGATTTATCAGTAATGGGAATAGATATACATATGAATGTTTATATTAAAAAT
AATGTTGTTTTAGTTTATTCTGTTAGAGGTTAA

Upstream 100 bases:

>100_bases
TATGAAAAAGATAACGGAAACTCGTCAATGTTAAATAATCCACTATCAATGTCTTTTATAGTTATGCAGTGGTGTGAAGA
AAAACCAAAAGGATAATAAT

Downstream 100 bases:

>100_bases
TACAATGAAGAAAAAAGCATTGATTTTGATTATATCTATATTATCTGGATGCTCTTCAACTAATATGAGTGATAAAAATG
AGAACTCATTAGATCTTATA

Product: toxin coregulated pilus biosynthesis protein TcpY/TcpQ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MKKNIILITLAIMSSGCSSIESLKTDKGNPSYSSFSDWRNKQVNTTINEENKPVNSTFSVVVDESYNPKDTMENNESSLS
SVDIESKFVLTAQEGESLKNRLLDFLSNNGYKMIWNSQYDVLFDNDIIYEGDEALDVVKNISDDLSVMGIDIHMNVYIKN
NVVLVYSVRG

Sequences:

>Translated_170_residues
MKKNIILITLAIMSSGCSSIESLKTDKGNPSYSSFSDWRNKQVNTTINEENKPVNSTFSVVVDESYNPKDTMENNESSLS
SVDIESKFVLTAQEGESLKNRLLDFLSNNGYKMIWNSQYDVLFDNDIIYEGDEALDVVKNISDDLSVMGIDIHMNVYIKN
NVVLVYSVRG
>Mature_170_residues
MKKNIILITLAIMSSGCSSIESLKTDKGNPSYSSFSDWRNKQVNTTINEENKPVNSTFSVVVDESYNPKDTMENNESSLS
SVDIESKFVLTAQEGESLKNRLLDFLSNNGYKMIWNSQYDVLFDNDIIYEGDEALDVVKNISDDLSVMGIDIHMNVYIKN
NVVLVYSVRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19143; Mature: 19143

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNIILITLAIMSSGCSSIESLKTDKGNPSYSSFSDWRNKQVNTTINEENKPVNSTFSV
CCCCEEEEEEEHHHCCCHHHHHHHCCCCCCCCCCHHHHCCCCCCCEECCCCCCCCCEEEE
VVDESYNPKDTMENNESSLSSVDIESKFVLTAQEGESLKNRLLDFLSNNGYKMIWNSQYD
EEECCCCCCCCCCCCCCCCEEECCCCEEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCC
VLFDNDIIYEGDEALDVVKNISDDLSVMGIDIHMNVYIKNNVVLVYSVRG
EEECCCEEECCHHHHHHHHCCCCCCEEEEEEEEEEEEEECCEEEEEEECC
>Mature Secondary Structure
MKKNIILITLAIMSSGCSSIESLKTDKGNPSYSSFSDWRNKQVNTTINEENKPVNSTFSV
CCCCEEEEEEEHHHCCCHHHHHHHCCCCCCCCCCHHHHCCCCCCCEECCCCCCCCCEEEE
VVDESYNPKDTMENNESSLSSVDIESKFVLTAQEGESLKNRLLDFLSNNGYKMIWNSQYD
EEECCCCCCCCCCCCCCCCEEECCCCEEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCC
VLFDNDIIYEGDEALDVVKNISDDLSVMGIDIHMNVYIKNNVVLVYSVRG
EEECCCEEECCHHHHHHHHCCCCCCEEEEEEEEEEEEEECCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA