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The map label for this gene is uidR [C]

Identifier: 59713129

GI number: 59713129

Start: 2830889

End: 2831455

Strand: Direct

Name: uidR [C]

Synonym: VF_2522

Alternate gene names: 59713129

Gene position: 2830889-2831455 (Clockwise)

Preceding gene: 59713127

Following gene: 59713130

Centisome position: 97.7

GC content: 35.98

Gene sequence:

>567_bases
ATGAAGGAAAAACGTCAGCTTATTTTAGAATCGGCCGAAAAACTGTTAGCAACTGATGGCTTTCATGGCTTATCAATGCA
AAAAGTTGCCAATCAAGCAGGCGTCGCAGCAGGTACTATCTATCGCTACTTTGATGACAAAGAAGCATTGATTGAAGAAA
TCAAGCTGAACATTATGCAACGTGTAGCAACTGCCATTCAAAAAGACATAGATGATAACGACCCTATAAAGGTTCGTTTT
AGATCTATGTGGCTAAATATTTGGCACTTTGCTATTTCAGAAAAAAATACTTTTTTAAATCGAAATCAATATGAAGCACT
CCCGTCTTCGAATTTAATTAAGTTAAAGGAACTAGAGAAAAAAATATTTGCCCAAGTGAATCAACTCTTTATTGATGGAC
TTGAACAAGGCGTATTTAAACCTCTCAGTGTAGAAATCCTTGTAGGATTAAGCTTAGAAGCAAGTGTTTGCTTAGCAAGA
AAACATTCTCAAGGCTTTTTTACATTAACAGATGATGATCTCAACTCGGCGATTGAAGCCAGTTGGGACGCAATTATTAA
ACACTAA

Upstream 100 bases:

>100_bases
ATGTGATCTTTACGTTTCTTGACACAAAAACAGATTACATTTCAAACAGAGTCCCCTAAAATAATGAATGAACGTTCATT
CATTTCATAAGGACGTATTT

Downstream 100 bases:

>100_bases
TTTGGAGTTCTAATCAGAATGAAAAAGTGGACTTTCTTTATGTTGCTTCTTGCACTACTTCTTTTTGGTAGCGTAATTGG
TTTCAACATGTTCAAACAAC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MKEKRQLILESAEKLLATDGFHGLSMQKVANQAGVAAGTIYRYFDDKEALIEEIKLNIMQRVATAIQKDIDDNDPIKVRF
RSMWLNIWHFAISEKNTFLNRNQYEALPSSNLIKLKELEKKIFAQVNQLFIDGLEQGVFKPLSVEILVGLSLEASVCLAR
KHSQGFFTLTDDDLNSAIEASWDAIIKH

Sequences:

>Translated_188_residues
MKEKRQLILESAEKLLATDGFHGLSMQKVANQAGVAAGTIYRYFDDKEALIEEIKLNIMQRVATAIQKDIDDNDPIKVRF
RSMWLNIWHFAISEKNTFLNRNQYEALPSSNLIKLKELEKKIFAQVNQLFIDGLEQGVFKPLSVEILVGLSLEASVCLAR
KHSQGFFTLTDDDLNSAIEASWDAIIKH
>Mature_188_residues
MKEKRQLILESAEKLLATDGFHGLSMQKVANQAGVAAGTIYRYFDDKEALIEEIKLNIMQRVATAIQKDIDDNDPIKVRF
RSMWLNIWHFAISEKNTFLNRNQYEALPSSNLIKLKELEKKIFAQVNQLFIDGLEQGVFKPLSVEILVGLSLEASVCLAR
KHSQGFFTLTDDDLNSAIEASWDAIIKH

Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 21383; Mature: 21383

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEKRQLILESAEKLLATDGFHGLSMQKVANQAGVAAGTIYRYFDDKEALIEEIKLNIMQ
CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHH
RVATAIQKDIDDNDPIKVRFRSMWLNIWHFAISEKNTFLNRNQYEALPSSNLIKLKELEK
HHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHCCCCHHCCCCHHHCCCCCCCCHHHHHHH
KIFAQVNQLFIDGLEQGVFKPLSVEILVGLSLEASVCLARKHSQGFFTLTDDDLNSAIEA
HHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHCCCCEEEEECHHHHHHHHH
SWDAIIKH
HHHHHHCC
>Mature Secondary Structure
MKEKRQLILESAEKLLATDGFHGLSMQKVANQAGVAAGTIYRYFDDKEALIEEIKLNIMQ
CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHH
RVATAIQKDIDDNDPIKVRFRSMWLNIWHFAISEKNTFLNRNQYEALPSSNLIKLKELEK
HHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHCCCCHHCCCCHHHCCCCCCCCHHHHHHH
KIFAQVNQLFIDGLEQGVFKPLSVEILVGLSLEASVCLARKHSQGFFTLTDDDLNSAIEA
HHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHCCCCEEEEECHHHHHHHHH
SWDAIIKH
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]