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The map label for this gene is 59713127

Identifier: 59713127

GI number: 59713127

Start: 2828211

End: 2828618

Strand: Direct

Name: 59713127

Synonym: VF_2520

Alternate gene names: NA

Gene position: 2828211-2828618 (Clockwise)

Preceding gene: 59713121

Following gene: 59713129

Centisome position: 97.61

GC content: 41.67

Gene sequence:

>408_bases
ATGGAAAAATCTGTTCGTAACATCATCATTGCAATGGTTGCTGTATTAACTTTCTCAACCACCTCTTTTGCAGCAAATAA
CTCTGATGATGCTATTGCTGAGCGAATTAAGCCAGTTGGCCAAGTTTATCTTGCGAGCGATGTTCCTGTGGTTGAAGAAC
CAACTGGCCCTCGTTCTGGTGAGCAAGTTTACAATACCTTCTGTATTGCCTGTCACGCGACAGGGGCTGCTGGTGCACCA
AAAACACAAAATGCAGAAGATTGGGCCCCTCGAATAGCAAAAGGTATGGACACACTAAAAGATCATGCTCTTAATGGCTT
TAATGCAATGCCAGCAAAAGGATCTTGTATGAATTGTTCTGATGATGAAGTTATTGCAGCAGTAGAGCATTTAATTAAAG
GGTTATAA

Upstream 100 bases:

>100_bases
ATGTTAACGTTCTGATTTTTTTCGGTTCGTTAAAAACTCGGTAAATACAATAAAATCGGCTGAAGCCAATAATAATAACT
GGGAGTGTAAAGTGAACTTT

Downstream 100 bases:

>100_bases
AAATAATCTACTTATAAATAAAAATGCCCATAGAATTTTCTACGGGCATTAACGTTATCTATAAACTCTACTTTTTGAGC
ATGGCTCTGAGGTTGGCAAT

Product: cytochrome c5

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MEKSVRNIIIAMVAVLTFSTTSFAANNSDDAIAERIKPVGQVYLASDVPVVEEPTGPRSGEQVYNTFCIACHATGAAGAP
KTQNAEDWAPRIAKGMDTLKDHALNGFNAMPAKGSCMNCSDDEVIAAVEHLIKGL

Sequences:

>Translated_135_residues
MEKSVRNIIIAMVAVLTFSTTSFAANNSDDAIAERIKPVGQVYLASDVPVVEEPTGPRSGEQVYNTFCIACHATGAAGAP
KTQNAEDWAPRIAKGMDTLKDHALNGFNAMPAKGSCMNCSDDEVIAAVEHLIKGL
>Mature_135_residues
MEKSVRNIIIAMVAVLTFSTTSFAANNSDDAIAERIKPVGQVYLASDVPVVEEPTGPRSGEQVYNTFCIACHATGAAGAP
KTQNAEDWAPRIAKGMDTLKDHALNGFNAMPAKGSCMNCSDDEVIAAVEHLIKGL

Specific function: It is unreactive with cytochrome c reductase or oxidase [H]

COG id: COG3245

COG function: function code C; Cytochrome c5

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR002323 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14280; Mature: 14280

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKSVRNIIIAMVAVLTFSTTSFAANNSDDAIAERIKPVGQVYLASDVPVVEEPTGPRSG
CCHHHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCH
EQVYNTFCIACHATGAAGAPKTQNAEDWAPRIAKGMDTLKDHALNGFNAMPAKGSCMNCS
HHHHHHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
DDEVIAAVEHLIKGL
CHHHHHHHHHHHHCC
>Mature Secondary Structure
MEKSVRNIIIAMVAVLTFSTTSFAANNSDDAIAERIKPVGQVYLASDVPVVEEPTGPRSG
CCHHHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCH
EQVYNTFCIACHATGAAGAPKTQNAEDWAPRIAKGMDTLKDHALNGFNAMPAKGSCMNCS
HHHHHHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
DDEVIAAVEHLIKGL
CHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2993632 [H]