Click here to switch to the map view.

The map label for this gene is yegM [C]

Identifier: 59713130

GI number: 59713130

Start: 2831474

End: 2832580

Strand: Direct

Name: yegM [C]

Synonym: VF_2523

Alternate gene names: 59713130

Gene position: 2831474-2832580 (Clockwise)

Preceding gene: 59713129

Following gene: 59713131

Centisome position: 97.72

GC content: 37.85

Gene sequence:

>1107_bases
ATGAAAAAGTGGACTTTCTTTATGTTGCTTCTTGCACTACTTCTTTTTGGTAGCGTAATTGGTTTCAACATGTTCAAACA
ACAAAAAATAGCTGAATACATGGCTAACCGCCCTGAAGCTGAATTTCCAGTCACTGTAGAAACCGTTGAACCTACGCTTT
GGACTCCAACCATTGAAGCGATCGGTTTTATTGAACCTAATCAAGGTGTGACGCTAACTACTGAAGTTAACGGCATTATT
GATAAAATTTCATTTGATTCAGGTAGCCAAGTTAAAAAAGGCCAAGTATTAGTTTCTCTTGATTCAAAAGTAGAAAAAGC
AAACTTGAAGAGTACTCAAGCTCGCTTACCTGCAGCAGAAGCAAAATATAAACGTTATAAAGGTCTATACAAAAAAGGCT
CTATTTCAAAAGAGGCTTACGATGAAGCTGAAGCTAATTATTTATCGTTAGCGGCTGATATCGAAAGTATGAAAGCATCA
ATTGATCGCCGTGAAATCAAAGCTCCATTCTCAGGTGTTATTGGTATTCGTAATGTTTACCTAGGTCAATACTTACAACC
AAGTACTGATATTGTTCGCTTAGAAGATACAAGCGTTATGCGTTTACGCTTTACTGTTCCTCAAACGGATATTTCAAAAA
TCAACATTGGTCAAGAGATTGATATCTCAGTTGATTCATACCCAGAGGATACTTTCCGCGGCTCTATCAGTGCGATTGAA
CCTGCTGTAAATATTCAAAGTGGTTTAATTGAGGTTCAAGCAGATATCCCTAATAACGGCGGTAAATTACGCAGTGGTAT
GTTTGCTCAAGCAAAAATCATTCTTCCGACTTTAGAAAACCAAGTTGTGATTCCTCAAACAGCAATTACCTTCACTCTAT
ATGGTGACAATGTTTATATCGTGTCTGAAAAAGATGGCGTAAAACGAGTTCAACAACATGTAGTGAAAGTTGGTGAGCGT
TCTAAAGATATTGCACATATTTTAGAGGGCGTTAAAGCTGGAGATATGGTTGTAACAACTGGTCAAGTTCGTCTAAGTAA
CGACGCTAAAGTTCGTATTGTGGAAAGTAATGCCACAACACCACCTGCTGAAACACCAATGCTGTAA

Upstream 100 bases:

>100_bases
TTCTCAAGGCTTTTTTACATTAACAGATGATGATCTCAACTCGGCGATTGAAGCCAGTTGGGACGCAATTATTAAACACT
AATTTGGAGTTCTAATCAGA

Downstream 100 bases:

>100_bases
TCGGAGGCATTATGCGCTTTACTGATGTTTTTATTAAACGTCCAGTTTTAGCGGTATCGATCAGCTTTTTGATTGCTTTG
CTTGGTATCCAAGCGATTTT

Product: periplasmic component of efflux system

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MKKWTFFMLLLALLLFGSVIGFNMFKQQKIAEYMANRPEAEFPVTVETVEPTLWTPTIEAIGFIEPNQGVTLTTEVNGII
DKISFDSGSQVKKGQVLVSLDSKVEKANLKSTQARLPAAEAKYKRYKGLYKKGSISKEAYDEAEANYLSLAADIESMKAS
IDRREIKAPFSGVIGIRNVYLGQYLQPSTDIVRLEDTSVMRLRFTVPQTDISKINIGQEIDISVDSYPEDTFRGSISAIE
PAVNIQSGLIEVQADIPNNGGKLRSGMFAQAKIILPTLENQVVIPQTAITFTLYGDNVYIVSEKDGVKRVQQHVVKVGER
SKDIAHILEGVKAGDMVVTTGQVRLSNDAKVRIVESNATTPPAETPML

Sequences:

>Translated_368_residues
MKKWTFFMLLLALLLFGSVIGFNMFKQQKIAEYMANRPEAEFPVTVETVEPTLWTPTIEAIGFIEPNQGVTLTTEVNGII
DKISFDSGSQVKKGQVLVSLDSKVEKANLKSTQARLPAAEAKYKRYKGLYKKGSISKEAYDEAEANYLSLAADIESMKAS
IDRREIKAPFSGVIGIRNVYLGQYLQPSTDIVRLEDTSVMRLRFTVPQTDISKINIGQEIDISVDSYPEDTFRGSISAIE
PAVNIQSGLIEVQADIPNNGGKLRSGMFAQAKIILPTLENQVVIPQTAITFTLYGDNVYIVSEKDGVKRVQQHVVKVGER
SKDIAHILEGVKAGDMVVTTGQVRLSNDAKVRIVESNATTPPAETPML
>Mature_368_residues
MKKWTFFMLLLALLLFGSVIGFNMFKQQKIAEYMANRPEAEFPVTVETVEPTLWTPTIEAIGFIEPNQGVTLTTEVNGII
DKISFDSGSQVKKGQVLVSLDSKVEKANLKSTQARLPAAEAKYKRYKGLYKKGSISKEAYDEAEANYLSLAADIESMKAS
IDRREIKAPFSGVIGIRNVYLGQYLQPSTDIVRLEDTSVMRLRFTVPQTDISKINIGQEIDISVDSYPEDTFRGSISAIE
PAVNIQSGLIEVQADIPNNGGKLRSGMFAQAKIILPTLENQVVIPQTAITFTLYGDNVYIVSEKDGVKRVQQHVVKVGER
SKDIAHILEGVKAGDMVVTTGQVRLSNDAKVRIVESNATTPPAETPML

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI87082036, Length=329, Percent_Identity=27.6595744680851, Blast_Score=114, Evalue=7e-27,
Organism=Escherichia coli, GI1789665, Length=372, Percent_Identity=26.6129032258064, Blast_Score=88, Evalue=7e-19,
Organism=Escherichia coli, GI1789929, Length=383, Percent_Identity=24.8041775456919, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI87081796, Length=324, Percent_Identity=26.2345679012346, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1786668, Length=390, Percent_Identity=25.1282051282051, Blast_Score=72, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 40566; Mature: 40566

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKWTFFMLLLALLLFGSVIGFNMFKQQKIAEYMANRPEAEFPVTVETVEPTLWTPTIEA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEECCCHHE
IGFIEPNQGVTLTTEVNGIIDKISFDSGSQVKKGQVLVSLDSKVEKANLKSTQARLPAAE
EEEECCCCCEEEEEECCCEEEEEECCCCCCEECCEEEEEECCCHHHCCCCHHHHHCCHHH
AKYKRYKGLYKKGSISKEAYDEAEANYLSLAADIESMKASIDRREIKAPFSGVIGIRNVY
HHHHHHHCCCCCCCCCHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LGQYLQPSTDIVRLEDTSVMRLRFTVPQTDISKINIGQEIDISVDSYPEDTFRGSISAIE
HCCCCCCCCCEEEEECCEEEEEEEECCCCCCCEECCCCEEEEEECCCCCHHHCCCCHHHC
PAVNIQSGLIEVQADIPNNGGKLRSGMFAQAKIILPTLENQVVIPQTAITFTLYGDNVYI
CCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCEEECCEEEEEEEECCEEEE
VSEKDGVKRVQQHVVKVGERSKDIAHILEGVKAGDMVVTTGQVRLSNDAKVRIVESNATT
EECCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCEEEEECEEEECCCCEEEEEECCCCC
PPAETPML
CCCCCCCC
>Mature Secondary Structure
MKKWTFFMLLLALLLFGSVIGFNMFKQQKIAEYMANRPEAEFPVTVETVEPTLWTPTIEA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEECCCHHE
IGFIEPNQGVTLTTEVNGIIDKISFDSGSQVKKGQVLVSLDSKVEKANLKSTQARLPAAE
EEEECCCCCEEEEEECCCEEEEEECCCCCCEECCEEEEEECCCHHHCCCCHHHHHCCHHH
AKYKRYKGLYKKGSISKEAYDEAEANYLSLAADIESMKASIDRREIKAPFSGVIGIRNVY
HHHHHHHCCCCCCCCCHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LGQYLQPSTDIVRLEDTSVMRLRFTVPQTDISKINIGQEIDISVDSYPEDTFRGSISAIE
HCCCCCCCCCEEEEECCEEEEEEEECCCCCCCEECCCCEEEEEECCCCCHHHCCCCHHHC
PAVNIQSGLIEVQADIPNNGGKLRSGMFAQAKIILPTLENQVVIPQTAITFTLYGDNVYI
CCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCEEECCEEEEEEEECCEEEE
VSEKDGVKRVQQHVVKVGERSKDIAHILEGVKAGDMVVTTGQVRLSNDAKVRIVESNATT
EECCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCEEEEECEEEECCCCEEEEEECCCCC
PPAETPML
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]