| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59713097
Identifier: 59713097
GI number: 59713097
Start: 2791786
End: 2792256
Strand: Direct
Name: 59713097
Synonym: VF_2490
Alternate gene names: NA
Gene position: 2791786-2792256 (Clockwise)
Preceding gene: 59713096
Following gene: 59713098
Centisome position: 96.35
GC content: 38.22
Gene sequence:
>471_bases ATGGCTCGCATTACTGCAGAAGAAAAAGAGCAGAAAAAGAATCAATACGATGCCCTCATATTTCAAATTTTTACAGAAGA AGGGTGGGATGCTGTTACTTATGATCGCCTAGCAAAAGAACTAGACATAGGTAAAAGCTCATTACAACGTTACTACCCTA GCAACCTATTTTTTGCCACAGCACTACAGGGAAAAGTTTTTCCTTTGGCTATACAGAAACTAGATCTAAGTTCTAAATCA GCATTTATTCAATCTTGGCTAACAGCCTACCATGATGAAAATGACCATATTTTTCATGAAGTCATTCGGATGTTAATGGC CAATATCATGAATCACGGAGGCGCACCAGCCACTAAATCAGCGATTGGACGCTTAATTGCACTATTAGCGCAAACTCTCG GTGAAGATGACGCAAAAGATGCAGTAATTACAGCTCTCGGCTATACAATTTATTCATATATAGAACAATAA
Upstream 100 bases:
>100_bases TTTACGAGATAGGTAATAATTCTTATCACCCGATATATTCATAACATGTTAGTCTTCAGTTACTTTCATAAAAACATAAA CTCAAGCAATAGGTATATAC
Downstream 100 bases:
>100_bases CTTATAAGTTTAATTAAAATTAGTTTAATTTTTATGCGTACTAGTACTTTACAGTGGAACGCAATACCCTATAATGAGCC GCATACAAAGCAAGGACGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MARITAEEKEQKKNQYDALIFQIFTEEGWDAVTYDRLAKELDIGKSSLQRYYPSNLFFATALQGKVFPLAIQKLDLSSKS AFIQSWLTAYHDENDHIFHEVIRMLMANIMNHGGAPATKSAIGRLIALLAQTLGEDDAKDAVITALGYTIYSYIEQ
Sequences:
>Translated_156_residues MARITAEEKEQKKNQYDALIFQIFTEEGWDAVTYDRLAKELDIGKSSLQRYYPSNLFFATALQGKVFPLAIQKLDLSSKS AFIQSWLTAYHDENDHIFHEVIRMLMANIMNHGGAPATKSAIGRLIALLAQTLGEDDAKDAVITALGYTIYSYIEQ >Mature_155_residues ARITAEEKEQKKNQYDALIFQIFTEEGWDAVTYDRLAKELDIGKSSLQRYYPSNLFFATALQGKVFPLAIQKLDLSSKSA FIQSWLTAYHDENDHIFHEVIRMLMANIMNHGGAPATKSAIGRLIALLAQTLGEDDAKDAVITALGYTIYSYIEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17611; Mature: 17480
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARITAEEKEQKKNQYDALIFQIFTEEGWDAVTYDRLAKELDIGKSSLQRYYPSNLFFAT CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCCEEHH ALQGKVFPLAIQKLDLSSKSAFIQSWLTAYHDENDHIFHEVIRMLMANIMNHGGAPATKS HHCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHH AIGRLIALLAQTLGEDDAKDAVITALGYTIYSYIEQ HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ARITAEEKEQKKNQYDALIFQIFTEEGWDAVTYDRLAKELDIGKSSLQRYYPSNLFFAT CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCCEEHH ALQGKVFPLAIQKLDLSSKSAFIQSWLTAYHDENDHIFHEVIRMLMANIMNHGGAPATKS HHCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHH AIGRLIALLAQTLGEDDAKDAVITALGYTIYSYIEQ HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA