| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59713098
Identifier: 59713098
GI number: 59713098
Start: 2792427
End: 2793734
Strand: Direct
Name: 59713098
Synonym: VF_2491
Alternate gene names: NA
Gene position: 2792427-2793734 (Clockwise)
Preceding gene: 59713097
Following gene: 59713103
Centisome position: 96.37
GC content: 37.69
Gene sequence:
>1308_bases ATGAAAAAGTCTATTCTAGCGTTATCAGTTCTTAGTGTTTTTTCTTTTGGTGCGACTGCTTCACCTGAATTAGGAAACGG ACAGTTAGGTTTTACTGCTGAAGATAAAGTTGAGTTTGTTAATGCCAATACAAATATGAACCTTATTGTTCAGCGTTCTG CTGATGGCTCAGTAAAACTAATTGATGGTGGAACTGGTCAAATTTATACATATGCTCAAATTTTAGACATGACGGAAGAG GCTAGAAAAACAGTTAAAAATGCAGCTCCATCTTACGATTTCAAAAATGGTGAAATGTTTGATGACGCAATAAAATCCCG AATGAATAATGACGATAAATATGAGTTTACTATCGAACAAAAAGTTTCTGCTATTAATAAACTATCTACATCTAGCAACG AATTTTTTATTCAAGATGGAAAACTTTTTGTAAAATCGGGAAAAAATGGAGAAAGCAGAGAAGTTTCTCAAGACGAAGTA AAACTTGCTAAACAGTTAATAGTAAAAGAAGCTCAAGAACGCTCAGAACCTATTGATGGAATTAATCCTCCAGCAACAGA TTTACCAAATATTCCGGTAACCCGTGAAGAAGCAATTCAATATATTGTTGATGGTAACGTTCAAGTTAAGAATGCTAAAA ACCTAGATAAAGCAGTAAAGTTTCGTATGAACAATGAAGATAAATATGAATTCACTGCTGAACAAAAAGTTGCCGCTGTA AATAAGCTTACAGGTAATGATCGTTATAGCGTTCAAACGTCAGCTGATGGCTCAAAACATCTAATCGATAATGAAACGGG CCATGCTTATACTCCAGAACAAGCTGAATCAATGGCGAAAGAAGCTCGCACAAAAATTATTGCTGAAGCGCAAAAACGTG CGGAGACTACTCCTCCAGAAGGAAGCCTTCCGCCAGTAGAAAATCCAGAACAACCACCAGTAATTGAACCTGATAATGAA GCAGTAAAAAAAGCGGTACAAAACTTAGCATCACATGGATACTCTTCTCAAGCTAACATCGACACTAACGCAGCAAACAT AGACGAGCTATTTAACATTACCGCTGATTTACGTGAAGATTTAGAATTACAAGGTGCTCGTAACATGGCGGCAATATCTG CTCGTGCATTTACGACTGAAGAGGGTGAGTTTTCTGTAGGTGTTGGCCTTGGTGGTTCTGGTTCAGAGAACGCAATGGCA ATTGGTGGTGCATACCAAATCAATGCTAACTGGTCAGTAAACACAACAATCGCATTCGATACAGGTTCAAATGCTGATTA CGGTGTTGGTGCTCACTACTCTTGGTAA
Upstream 100 bases:
>100_bases ATAATGAGCCGCATACAAAGCAAGGACGGAACAACGCCGACTTTGCTTTTTATTTAAAACCAATGTGTACTAATACACAA AGATTTATAGGTATATAAAA
Downstream 100 bases:
>100_bases TCAAATACCTATAAAACTTTTTGTTTTAGCCCCAAACCGTAAGGTAAGGGGTTTTTTTATAGATAAAAAAACGCCGCCAA TTAACCTTGGCGGCGTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 435; Mature: 435
Protein sequence:
>435_residues MKKSILALSVLSVFSFGATASPELGNGQLGFTAEDKVEFVNANTNMNLIVQRSADGSVKLIDGGTGQIYTYAQILDMTEE ARKTVKNAAPSYDFKNGEMFDDAIKSRMNNDDKYEFTIEQKVSAINKLSTSSNEFFIQDGKLFVKSGKNGESREVSQDEV KLAKQLIVKEAQERSEPIDGINPPATDLPNIPVTREEAIQYIVDGNVQVKNAKNLDKAVKFRMNNEDKYEFTAEQKVAAV NKLTGNDRYSVQTSADGSKHLIDNETGHAYTPEQAESMAKEARTKIIAEAQKRAETTPPEGSLPPVENPEQPPVIEPDNE AVKKAVQNLASHGYSSQANIDTNAANIDELFNITADLREDLELQGARNMAAISARAFTTEEGEFSVGVGLGGSGSENAMA IGGAYQINANWSVNTTIAFDTGSNADYGVGAHYSW
Sequences:
>Translated_435_residues MKKSILALSVLSVFSFGATASPELGNGQLGFTAEDKVEFVNANTNMNLIVQRSADGSVKLIDGGTGQIYTYAQILDMTEE ARKTVKNAAPSYDFKNGEMFDDAIKSRMNNDDKYEFTIEQKVSAINKLSTSSNEFFIQDGKLFVKSGKNGESREVSQDEV KLAKQLIVKEAQERSEPIDGINPPATDLPNIPVTREEAIQYIVDGNVQVKNAKNLDKAVKFRMNNEDKYEFTAEQKVAAV NKLTGNDRYSVQTSADGSKHLIDNETGHAYTPEQAESMAKEARTKIIAEAQKRAETTPPEGSLPPVENPEQPPVIEPDNE AVKKAVQNLASHGYSSQANIDTNAANIDELFNITADLREDLELQGARNMAAISARAFTTEEGEFSVGVGLGGSGSENAMA IGGAYQINANWSVNTTIAFDTGSNADYGVGAHYSW >Mature_435_residues MKKSILALSVLSVFSFGATASPELGNGQLGFTAEDKVEFVNANTNMNLIVQRSADGSVKLIDGGTGQIYTYAQILDMTEE ARKTVKNAAPSYDFKNGEMFDDAIKSRMNNDDKYEFTIEQKVSAINKLSTSSNEFFIQDGKLFVKSGKNGESREVSQDEV KLAKQLIVKEAQERSEPIDGINPPATDLPNIPVTREEAIQYIVDGNVQVKNAKNLDKAVKFRMNNEDKYEFTAEQKVAAV NKLTGNDRYSVQTSADGSKHLIDNETGHAYTPEQAESMAKEARTKIIAEAQKRAETTPPEGSLPPVENPEQPPVIEPDNE AVKKAVQNLASHGYSSQANIDTNAANIDELFNITADLREDLELQGARNMAAISARAFTTEEGEFSVGVGLGGSGSENAMA IGGAYQINANWSVNTTIAFDTGSNADYGVGAHYSW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47234; Mature: 47234
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKSILALSVLSVFSFGATASPELGNGQLGFTAEDKVEFVNANTNMNLIVQRSADGSVKL CCCHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCEEEEECCCCEEEEEEECCCCCEEE IDGGTGQIYTYAQILDMTEEARKTVKNAAPSYDFKNGEMFDDAIKSRMNNDDKYEFTIEQ EECCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEHHH KVSAINKLSTSSNEFFIQDGKLFVKSGKNGESREVSQDEVKLAKQLIVKEAQERSEPIDG HHHHHHHHCCCCCEEEEECCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC INPPATDLPNIPVTREEAIQYIVDGNVQVKNAKNLDKAVKFRMNNEDKYEFTAEQKVAAV CCCCCCCCCCCCCCHHHHHHEEECCCEEECCCCCCCHHHHEECCCCCCEEEEHHHHHHHH NKLTGNDRYSVQTSADGSKHLIDNETGHAYTPEQAESMAKEARTKIIAEAQKRAETTPPE HHCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GSLPPVENPEQPPVIEPDNEAVKKAVQNLASHGYSSQANIDTNAANIDELFNITADLRED CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHH LELQGARNMAAISARAFTTEEGEFSVGVGLGGSGSENAMAIGGAYQINANWSVNTTIAFD HHHCCCCCEEEEEEEEEECCCCCEEEEEECCCCCCCCEEEECCEEEEECCCEEEEEEEEE TGSNADYGVGAHYSW CCCCCCCCCCCCCCC >Mature Secondary Structure MKKSILALSVLSVFSFGATASPELGNGQLGFTAEDKVEFVNANTNMNLIVQRSADGSVKL CCCHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCEEEEECCCCEEEEEEECCCCCEEE IDGGTGQIYTYAQILDMTEEARKTVKNAAPSYDFKNGEMFDDAIKSRMNNDDKYEFTIEQ EECCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEHHH KVSAINKLSTSSNEFFIQDGKLFVKSGKNGESREVSQDEVKLAKQLIVKEAQERSEPIDG HHHHHHHHCCCCCEEEEECCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC INPPATDLPNIPVTREEAIQYIVDGNVQVKNAKNLDKAVKFRMNNEDKYEFTAEQKVAAV CCCCCCCCCCCCCCHHHHHHEEECCCEEECCCCCCCHHHHEECCCCCCEEEEHHHHHHHH NKLTGNDRYSVQTSADGSKHLIDNETGHAYTPEQAESMAKEARTKIIAEAQKRAETTPPE HHCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GSLPPVENPEQPPVIEPDNEAVKKAVQNLASHGYSSQANIDTNAANIDELFNITADLRED CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHH LELQGARNMAAISARAFTTEEGEFSVGVGLGGSGSENAMAIGGAYQINANWSVNTTIAFD HHHCCCCCEEEEEEEEEECCCCCEEEEEECCCCCCCCEEEECCEEEEECCCEEEEEEEEE TGSNADYGVGAHYSW CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA