Definition Vibrio fischeri ES114 chromosome I, complete genome.
Accession NC_006840
Length 2,897,536

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The map label for this gene is 59712970

Identifier: 59712970

GI number: 59712970

Start: 2651101

End: 2652288

Strand: Reverse

Name: 59712970

Synonym: VF_2363

Alternate gene names: NA

Gene position: 2652288-2651101 (Counterclockwise)

Preceding gene: 172087767

Following gene: 59712968

Centisome position: 91.54

GC content: 41.58

Gene sequence:

>1188_bases
ATGTCGTTTTATACTTCTCGGTTATTAGTATTAATGAGCTTAAGTGTTTCTTTTGCTTCTTCAGCTGTTGATTTTAATGA
TCCCATTGACGGGAAACTGGATATGGGGGAGTACCTCGCAGAAAATGCTTATGGCTTTCTGCCAGTACCGATTTTAATCA
CCGAACCTGCTTTAGGTTATGGCTTCGGTTTTGCTGGTGTGTTTTTGCATGAGTCTGATCAGCAGAGAGAAAAGCGTAAA
CAATTAGCGGCAACCTCTTTGGATGGAGGTGCTCAGTTATTAACTCCTGCAATAACGGTGGCTGGTGGTTTGGCAACAGA
AAATGGCACATGGATGGGCTTCATTGGACATAGAAGAACTTGGAATAAAGATAGCATCCGTTACATGGGGGGGTTGGCTT
ATGGTGATATGAATATGACTTTCTATCGCCAAAAGAATAATGCAGGGGCGCTAGAACCCATTGTTGGAAATAGTGGTGTG
GAATTTGGTATGCGTGGCGGTGGTGGTATGCAGCAGCTTCAGTTTCGTGTTGATGATACCCCTTTGTTTTTGGGAGCGGT
GCAGAAATATTTCCAACCAGAATTGAGTATTAATAGTCACCCTAAAGCTGATGAAATTTTAAATCGATTGGGGAATACGA
CACCAACAGCATCGGGCCTTGGTCTATTAATGGAGTACGACACCAAAAATAACTTCTTAAACCCAACCGAAGGAGTGAAT
TATACCGTTGAGTATATTTGGTTTAGAGATGGTATTGGAAGTGACTATGATTTTGATACGTTAAATATTAAAGGCCGTCA
TTATTGGACGCTGACACCTGAGTGGTCTGTTGCGGCTAGAGGTTATTATAAATCACTCTATACCGACGAAAACTTTCTGC
CACCTCCTGCTTACCCTGATATTGAGCTGCGTGGTATAGCAAGAAACCGATATCAAGGAGAGCAAACCTTATCGCTTGAA
GGGCAAGTTAATTACCAATGGAACATTCGTTGGTCGAGTAATGTTTTTGCCGGTTTAGGTTATGCATCATCACAACATCA
ATCATTATTTAAAGGCGATGAACAATACGCTTATGGCGTAGGTTTCCGTTATTTAATTGCTCGTCGCTATGGTATGAAAA
CAGGGATCGATTTAGCGTTTAGCGAAGAAGATACAGCTCTTTATTTCCAAGTTGGGATGGGCATTTAA

Upstream 100 bases:

>100_bases
CATACTTTATTCAGTTGATTTATCGCCGTCATGAAGTTGATTAGACGATAAATTACCAGTTTCAACCAATGTGTTTGCTT
CTTAAATATGGATGTTTTAG

Downstream 100 bases:

>100_bases
ATATTACTTTATGATTTATCAATTTTCTCTTGGTACATGAGCGAATCTGCTTTAGCTAACATTTCTTTTAGAGAGGCATT
TGAATCATAAGAGACAAGAT

Product: hypothetical protein

Products: 3-phospho-D-glyceroyl phosphate; NADH; H+

Alternate protein names: Outer Membrane Protein/Protective Antigen OMA; Outer Membrane Protein; Surface Antigen

Number of amino acids: Translated: 395; Mature: 394

Protein sequence:

>395_residues
MSFYTSRLLVLMSLSVSFASSAVDFNDPIDGKLDMGEYLAENAYGFLPVPILITEPALGYGFGFAGVFLHESDQQREKRK
QLAATSLDGGAQLLTPAITVAGGLATENGTWMGFIGHRRTWNKDSIRYMGGLAYGDMNMTFYRQKNNAGALEPIVGNSGV
EFGMRGGGGMQQLQFRVDDTPLFLGAVQKYFQPELSINSHPKADEILNRLGNTTPTASGLGLLMEYDTKNNFLNPTEGVN
YTVEYIWFRDGIGSDYDFDTLNIKGRHYWTLTPEWSVAARGYYKSLYTDENFLPPPAYPDIELRGIARNRYQGEQTLSLE
GQVNYQWNIRWSSNVFAGLGYASSQHQSLFKGDEQYAYGVGFRYLIARRYGMKTGIDLAFSEEDTALYFQVGMGI

Sequences:

>Translated_395_residues
MSFYTSRLLVLMSLSVSFASSAVDFNDPIDGKLDMGEYLAENAYGFLPVPILITEPALGYGFGFAGVFLHESDQQREKRK
QLAATSLDGGAQLLTPAITVAGGLATENGTWMGFIGHRRTWNKDSIRYMGGLAYGDMNMTFYRQKNNAGALEPIVGNSGV
EFGMRGGGGMQQLQFRVDDTPLFLGAVQKYFQPELSINSHPKADEILNRLGNTTPTASGLGLLMEYDTKNNFLNPTEGVN
YTVEYIWFRDGIGSDYDFDTLNIKGRHYWTLTPEWSVAARGYYKSLYTDENFLPPPAYPDIELRGIARNRYQGEQTLSLE
GQVNYQWNIRWSSNVFAGLGYASSQHQSLFKGDEQYAYGVGFRYLIARRYGMKTGIDLAFSEEDTALYFQVGMGI
>Mature_394_residues
SFYTSRLLVLMSLSVSFASSAVDFNDPIDGKLDMGEYLAENAYGFLPVPILITEPALGYGFGFAGVFLHESDQQREKRKQ
LAATSLDGGAQLLTPAITVAGGLATENGTWMGFIGHRRTWNKDSIRYMGGLAYGDMNMTFYRQKNNAGALEPIVGNSGVE
FGMRGGGGMQQLQFRVDDTPLFLGAVQKYFQPELSINSHPKADEILNRLGNTTPTASGLGLLMEYDTKNNFLNPTEGVNY
TVEYIWFRDGIGSDYDFDTLNIKGRHYWTLTPEWSVAARGYYKSLYTDENFLPPPAYPDIELRGIARNRYQGEQTLSLEG
QVNYQWNIRWSSNVFAGLGYASSQHQSLFKGDEQYAYGVGFRYLIARRYGMKTGIDLAFSEEDTALYFQVGMGI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.2.1.12

Molecular weight: Translated: 44111; Mature: 43980

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFYTSRLLVLMSLSVSFASSAVDFNDPIDGKLDMGEYLAENAYGFLPVPILITEPALGY
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEEEECCCCCC
GFGFAGVFLHESDQQREKRKQLAATSLDGGAQLLTPAITVAGGLATENGTWMGFIGHRRT
CCCEEEEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEECCCCEEEEECCCCC
WNKDSIRYMGGLAYGDMNMTFYRQKNNAGALEPIVGNSGVEFGMRGGGGMQQLQFRVDDT
CCCCCCEEECEEEECCCCEEEEEECCCCCCCCEEECCCCCEECCCCCCCCEEEEEEECCC
PLFLGAVQKYFQPELSINSHPKADEILNRLGNTTPTASGLGLLMEYDTKNNFLNPTEGVN
CHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCC
YTVEYIWFRDGIGSDYDFDTLNIKGRHYWTLTPEWSVAARGYYKSLYTDENFLPPPAYPD
EEEEEEEEECCCCCCCCCEEEEECCEEEEEECCCCCHHHCHHHHHHCCCCCCCCCCCCCC
IELRGIARNRYQGEQTLSLEGQVNYQWNIRWSSNVFAGLGYASSQHQSLFKGDEQYAYGV
EEEEEEECCCCCCCEEEEEEEEEEEEEEEEECCCEEEECCCCCCHHHHHHCCCCCEEEHH
GFRYLIARRYGMKTGIDLAFSEEDTALYFQVGMGI
HHHHHHHHHHCCCCCCEEEECCCCCEEEEEECCCC
>Mature Secondary Structure 
SFYTSRLLVLMSLSVSFASSAVDFNDPIDGKLDMGEYLAENAYGFLPVPILITEPALGY
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEEEECCCCCC
GFGFAGVFLHESDQQREKRKQLAATSLDGGAQLLTPAITVAGGLATENGTWMGFIGHRRT
CCCEEEEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEECCCCEEEEECCCCC
WNKDSIRYMGGLAYGDMNMTFYRQKNNAGALEPIVGNSGVEFGMRGGGGMQQLQFRVDDT
CCCCCCEEECEEEECCCCEEEEEECCCCCCCCEEECCCCCEECCCCCCCCEEEEEEECCC
PLFLGAVQKYFQPELSINSHPKADEILNRLGNTTPTASGLGLLMEYDTKNNFLNPTEGVN
CHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCC
YTVEYIWFRDGIGSDYDFDTLNIKGRHYWTLTPEWSVAARGYYKSLYTDENFLPPPAYPD
EEEEEEEEECCCCCCCCCEEEEECCEEEEEECCCCCHHHCHHHHHHCCCCCCCCCCCCCC
IELRGIARNRYQGEQTLSLEGQVNYQWNIRWSSNVFAGLGYASSQHQSLFKGDEQYAYGV
EEEEEEECCCCCCCEEEEEEEEEEEEEEEEECCCEEEECCCCCCHHHHHHCCCCCEEEHH
GFRYLIARRYGMKTGIDLAFSEEDTALYFQVGMGI
HHHHHHHHHHCCCCCCEEEECCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: D-glyceraldehyde 3-phosphate; phosphate; NAD+

Specific reaction: D-glyceraldehyde 3-phosphate + phosphate + NAD+ = 3-phospho-D-glyceroyl phosphate + NADH + H+

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA