| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is znuA2 [H]
Identifier: 172087767
GI number: 172087767
Start: 2653991
End: 2654956
Strand: Reverse
Name: znuA2 [H]
Synonym: VF_2366
Alternate gene names: 172087767
Gene position: 2654956-2653991 (Counterclockwise)
Preceding gene: 59712979
Following gene: 59712970
Centisome position: 91.63
GC content: 40.06
Gene sequence:
>966_bases ATGTTTAAAAAAGCCATATCAGTGTTTGTTATGAGCTTAGCGGTGGTTTCACAGAGTTACGCTCAAGCCCCAAAGGTTGT CGTGGATATCGCTCCATTACACTCTTTAGTCACTCAAGTTATGGATGGCGTGGGTGAGCCGGATTTATTGATTCGTCCTG AAATGTCACCACATAGTTATCATTTGCGTCCTTCGGAAGCAAAAGCGCTTTCACAAGCGGATATTGTGTTTTGGGTTGGT GAAGGGTTAACGCCTTGGCTTGAAAAACCGTTATCAAGCTTAGCGGGTTCAGCGACTCAAATAGAAATGATAAAAGTAGA AGGAGTAACTCTTTACGACTTTAGAGAAGGAGCAACATTTGAAGCTCATGAGCACCATGATGACGCTCGAAATGATCATG AAGAGGAGCATAATGAACACAGCAAAGGTCATGAACACCATCACCATGATGGACATGATCCACATGTATGGTTAGACCCG AAAAATGCTGAAGTTTGGGTGAATATAATTGCTAAAACGTTATCTGATGCAGACAGCTCAAATGCGCCAATTTATCAAAA GAACGCTAAAATCACAGTCAGTCGTTTACATAAACTTTCTAGTAAGATTAAGCAACAAGCTAAAGGTTTAGAAGGTGTTA AGTTCATTGTGTTTCATGATGCTTATCAATACTTTGAGAAACGCTTTCAACTATTAGCATCGGGTGCGATTTCTATTTCT GATGCATCTAAACCGAGCCCTGCTCGAATTACAGACATTCGTGATACGGTGAAAAAGTTAGGTGTGACATGTGTCTTTAC TGAACCTCAATATAACCCCGAGTTAGTGAATAGTATTTTTGATAACTCAACAGTAAAGACAATTGGTACTATGGATCCAC TCGGCGCTAATTTGGCAATAGGCAAAGATCAATATGACTCATTATTGATGTCCATGATAGAGAGTCTAAGTCAGTGTAAA CCGTGA
Upstream 100 bases:
>100_bases TTTCAATATGGCTATTTAATTGTTATGTTATAACATAACAATTAATTTTGCCAACCTTGGTGTTTTGAAGGTTTCAAGTT ATTACTATTAGGAGAAGAAT
Downstream 100 bases:
>100_bases TATTTGTTTCTTACCAATAAAAACGGCAACCTAAAATAAGGTTGCCGTTTTTTATTTATCTCTTTAGAACCATGAAATTA AATTCCTGCCGGTTTAAAGA
Product: high-affinity zinc uptake system protein ZnuA2
Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 321; Mature: 321
Protein sequence:
>321_residues MFKKAISVFVMSLAVVSQSYAQAPKVVVDIAPLHSLVTQVMDGVGEPDLLIRPEMSPHSYHLRPSEAKALSQADIVFWVG EGLTPWLEKPLSSLAGSATQIEMIKVEGVTLYDFREGATFEAHEHHDDARNDHEEEHNEHSKGHEHHHHDGHDPHVWLDP KNAEVWVNIIAKTLSDADSSNAPIYQKNAKITVSRLHKLSSKIKQQAKGLEGVKFIVFHDAYQYFEKRFQLLASGAISIS DASKPSPARITDIRDTVKKLGVTCVFTEPQYNPELVNSIFDNSTVKTIGTMDPLGANLAIGKDQYDSLLMSMIESLSQCK P
Sequences:
>Translated_321_residues MFKKAISVFVMSLAVVSQSYAQAPKVVVDIAPLHSLVTQVMDGVGEPDLLIRPEMSPHSYHLRPSEAKALSQADIVFWVG EGLTPWLEKPLSSLAGSATQIEMIKVEGVTLYDFREGATFEAHEHHDDARNDHEEEHNEHSKGHEHHHHDGHDPHVWLDP KNAEVWVNIIAKTLSDADSSNAPIYQKNAKITVSRLHKLSSKIKQQAKGLEGVKFIVFHDAYQYFEKRFQLLASGAISIS DASKPSPARITDIRDTVKKLGVTCVFTEPQYNPELVNSIFDNSTVKTIGTMDPLGANLAIGKDQYDSLLMSMIESLSQCK P >Mature_321_residues MFKKAISVFVMSLAVVSQSYAQAPKVVVDIAPLHSLVTQVMDGVGEPDLLIRPEMSPHSYHLRPSEAKALSQADIVFWVG EGLTPWLEKPLSSLAGSATQIEMIKVEGVTLYDFREGATFEAHEHHDDARNDHEEEHNEHSKGHEHHHHDGHDPHVWLDP KNAEVWVNIIAKTLSDADSSNAPIYQKNAKITVSRLHKLSSKIKQQAKGLEGVKFIVFHDAYQYFEKRFQLLASGAISIS DASKPSPARITDIRDTVKKLGVTCVFTEPQYNPELVNSIFDNSTVKTIGTMDPLGANLAIGKDQYDSLLMSMIESLSQCK P
Specific function: Involved in the high-affinity zinc uptake transport system. Required for survival and normal growth under low Zn (2+) concentrations. Also required for virulence and intracellular growth in macrophages [H]
COG id: COG4531
COG function: function code P; ABC-type Zn2+ transport system, periplasmic component/surface adhesin
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 9 family [H]
Homologues:
Organism=Escherichia coli, GI87081990, Length=294, Percent_Identity=31.2925170068027, Blast_Score=154, Evalue=8e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006127 [H]
Pfam domain/function: PF01297 SBP_bac_9 [H]
EC number: NA
Molecular weight: Translated: 35668; Mature: 35668
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKKAISVFVMSLAVVSQSYAQAPKVVVDIAPLHSLVTQVMDGVGEPDLLIRPEMSPHSY CHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCCCEEECCCCCCCCE HLRPSEAKALSQADIVFWVGEGLTPWLEKPLSSLAGSATQIEMIKVEGVTLYDFREGATF ECCCHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCCEEEEEEECCEEEEECCCCCCC EAHEHHDDARNDHEEEHNEHSKGHEHHHHDGHDPHVWLDPKNAEVWVNIIAKTLSDADSS CCHHCCCHHCCCHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCC NAPIYQKNAKITVSRLHKLSSKIKQQAKGLEGVKFIVFHDAYQYFEKRFQLLASGAISIS CCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHCCCEEEC DASKPSPARITDIRDTVKKLGVTCVFTEPQYNPELVNSIFDNSTVKTIGTMDPLGANLAI CCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHCCCCEEEECCCCCCCCCEEE GKDQYDSLLMSMIESLSQCKP CCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MFKKAISVFVMSLAVVSQSYAQAPKVVVDIAPLHSLVTQVMDGVGEPDLLIRPEMSPHSY CHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCCCEEECCCCCCCCE HLRPSEAKALSQADIVFWVGEGLTPWLEKPLSSLAGSATQIEMIKVEGVTLYDFREGATF ECCCHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCCEEEEEEECCEEEEECCCCCCC EAHEHHDDARNDHEEEHNEHSKGHEHHHHDGHDPHVWLDPKNAEVWVNIIAKTLSDADSS CCHHCCCHHCCCHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCC NAPIYQKNAKITVSRLHKLSSKIKQQAKGLEGVKFIVFHDAYQYFEKRFQLLASGAISIS CCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHCCCEEEC DASKPSPARITDIRDTVKKLGVTCVFTEPQYNPELVNSIFDNSTVKTIGTMDPLGANLAI CCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHCCCCEEEECCCCCCCCCEEE GKDQYDSLLMSMIESLSQCKP CCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Zn (II) [Periplasm]; H2O; ATP [C]
Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA