| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is htrG [H]
Identifier: 59712848
GI number: 59712848
Start: 2517490
End: 2518101
Strand: Direct
Name: htrG [H]
Synonym: VF_2241
Alternate gene names: 59712848
Gene position: 2517490-2518101 (Clockwise)
Preceding gene: 59712847
Following gene: 59712851
Centisome position: 86.88
GC content: 39.87
Gene sequence:
>612_bases GTGAAGCATTTTATTAGCCTGATTCTACTTGCTTGGGCTATTGCTGCGCCAGCACAAGCTCAAACTCGTTATATTTCTGA TAACCTGTTTACTTACATGCATTCAGGTCCAAGTAACCAATATAAAATTATTGGTAGTGTTAATGCCGGTGATCGCATCA CTCAATTAGCAAGTAACAGAAGTACTGGCTTTACGCAAATCGTAGACACTAAAGGTCGTAAAGGCTGGGTTGAAAGTAAG TTTGTTTCTCGTCAACCAGGTTTAGGTGAACGTCTACCAAAAGTTGAAGAAGAATTAGCTTCAGTTAAAACGCAACTTGC TAACGCACGTAAAGCGGCTAACAATGAAAAAGCTGGATTAGCTGATAGCTTAGAGCAACGTAATAAGCAAATTCAGGATT TAGAGCAAAGCTACAGCGATGTAAATAATCAGCTAATCAGCTCTCAAACAGAAGTTCGTGAACTACGAGCTAAGCTTGAT ACGCAAAAAGAAGACTTACTACTAAAATACTTTATGTACGGCGGTGGTGTAGCTGGTATTGGTCTACTGTTTGGCTTACT GCTACCACACATGATCCCAAGTCGTAAGAAGAAACCAAATGGTTGGTCTTAA
Upstream 100 bases:
>100_bases TAATTATTTTTAGTATCTATACCTTCGTTTGAATCAATCAGATATCAACACTTGATGATCTGAAAATGATTCAGGGCCCA TTTTTCAAAGGAATATTATT
Downstream 100 bases:
>100_bases TCAATAAGTTTTATGACATAAAAAAGCTCAGATTATTCTGAGCTTTTTTGTATGTGTTACAAATTACCCTTTCCATTCAT ACAGAGCAGGAATTTCAATT
Product: signal transduction protein
Products: phenol; sulfate
Alternate protein names: NA
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MKHFISLILLAWAIAAPAQAQTRYISDNLFTYMHSGPSNQYKIIGSVNAGDRITQLASNRSTGFTQIVDTKGRKGWVESK FVSRQPGLGERLPKVEEELASVKTQLANARKAANNEKAGLADSLEQRNKQIQDLEQSYSDVNNQLISSQTEVRELRAKLD TQKEDLLLKYFMYGGGVAGIGLLFGLLLPHMIPSRKKKPNGWS
Sequences:
>Translated_203_residues MKHFISLILLAWAIAAPAQAQTRYISDNLFTYMHSGPSNQYKIIGSVNAGDRITQLASNRSTGFTQIVDTKGRKGWVESK FVSRQPGLGERLPKVEEELASVKTQLANARKAANNEKAGLADSLEQRNKQIQDLEQSYSDVNNQLISSQTEVRELRAKLD TQKEDLLLKYFMYGGGVAGIGLLFGLLLPHMIPSRKKKPNGWS >Mature_203_residues MKHFISLILLAWAIAAPAQAQTRYISDNLFTYMHSGPSNQYKIIGSVNAGDRITQLASNRSTGFTQIVDTKGRKGWVESK FVSRQPGLGERLPKVEEELASVKTQLANARKAANNEKAGLADSLEQRNKQIQDLEQSYSDVNNQLISSQTEVRELRAKLD TQKEDLLLKYFMYGGGVAGIGLLFGLLLPHMIPSRKKKPNGWS
Specific function: Unknown
COG id: COG3103
COG function: function code T; SH3 domain protein
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae HI_1605 [H]
Homologues:
Organism=Escherichia coli, GI1789435, Length=196, Percent_Identity=37.7551020408163, Blast_Score=127, Evalue=4e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003646 - InterPro: IPR013247 - InterPro: IPR016476 [H]
Pfam domain/function: PF08239 SH3_3 [H]
EC number: 3.1.6.1
Molecular weight: Translated: 22578; Mature: 22578
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHFISLILLAWAIAAPAQAQTRYISDNLFTYMHSGPSNQYKIIGSVNAGDRITQLASNR CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCC STGFTQIVDTKGRKGWVESKFVSRQPGLGERLPKVEEELASVKTQLANARKAANNEKAGL CCCHHHHHHCCCCCCCHHHHHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCH ADSLEQRNKQIQDLEQSYSDVNNQLISSQTEVRELRAKLDTQKEDLLLKYFMYGGGVAGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHH GLLFGLLLPHMIPSRKKKPNGWS HHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MKHFISLILLAWAIAAPAQAQTRYISDNLFTYMHSGPSNQYKIIGSVNAGDRITQLASNR CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCC STGFTQIVDTKGRKGWVESKFVSRQPGLGERLPKVEEELASVKTQLANARKAANNEKAGL CCCHHHHHHCCCCCCCHHHHHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCH ADSLEQRNKQIQDLEQSYSDVNNQLISSQTEVRELRAKLDTQKEDLLLKYFMYGGGVAGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHH GLLFGLLLPHMIPSRKKKPNGWS HHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: phenol sulfate; H2O
Specific reaction: A phenol sulfate + H2O = a phenol + sulfate
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]