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The map label for this gene is ygiF [H]

Identifier: 59712845

GI number: 59712845

Start: 2513630

End: 2515147

Strand: Reverse

Name: ygiF [H]

Synonym: VF_2238

Alternate gene names: 59712845

Gene position: 2515147-2513630 (Counterclockwise)

Preceding gene: 59712849

Following gene: 59712843

Centisome position: 86.8

GC content: 39.2

Gene sequence:

>1518_bases
ATGGAAACTGAAATAGAATTGAAATTTTTTGTATTTCCTGAGTTTGTAGACACTATTATAGACAAAATTTCAGGCGCGAA
AGTCATAGAACAAAGCTGTCTTAACCTAGGAAACATCTATTTTGATACTCCTGAACAGCATCTTCGTAAGCATGATACTG
GACTTAGAATCCGACGATTTAATGATGAACGCATTCAAACATTAAAGACTGCGGGAAGAGTTGTTGCTGGTTTGCATCAA
CGACCAGAATACAATGCAGATCACGATTCTGACATTCCAAATGTCTATTTACATCCTTCCGATGCATGGCCTGATGACAT
TGCTTTAGAAGATCTTCAGCAGCAACTTTCTCCTCTTTTTTCTACCAATTTTGTTCGTCAACAATGGTTAGTTGCTATGC
CTGATGGCAGTGAAATTGAATTGGCATTTGACCAAGGTGAGGTGATTTCGGGTGATAAAACTACACCGATTTGTGAAGTG
GAATTAGAACTGAAATCGGGTCAAACGGATGCTCTATTTACTCTAGCTCGTGATTTGTGTAGCTCTGGTGGAATGCGATT
GGGCAACCAAAGTAAAGCGGCAAAAGGGTATCGTTTAGCGATGGATACGCCTGCGGATAGCGTAAAACCGTTAACATTAG
TAAGAACCGAATCAAGCGATAGTGTAGAAACGTGCTTTGTTAATTCTCTAGAACATGCGTTGTCACATTGGCATTATCAT
GAACAAATTTATATCGATACTCAGGATAAATTAGCACTACAAGAAATTCGTATTGCTATCGCATTCTTACGACAAATTTT
CTTGGTATTTGGTGAAATGGTGCCAAAACGAGCCAGTGAGTTATTGCGTCAAGAGCTGAAATGGTTAGAAGAAGAGTTGC
ATTGGCTTGATGAGTCTGAACACCTTGAGTATTTAATAGAAGAAAAAGGCCACGTGTTAAGAAAATTAGATGCACGTAAA
TTTTTAGTTGCTAGCTTAAAAGAGAGTGCGGAAGCGTTACCAACGACGGATGCAATGATGAAGTTGCTGATGTCGGCTCG
TTATTGTGGGCTACTGCTGGATTTAAGTCGTTGGATTTTAACTCGTGATTGGCAGCCTTTCCTTGATGATAAAAAACGTC
AAGTGTTACAAGAATCTATTGATAGTCATTCTGGTATATTGCTTGATCGTACTTGGGAAGCGTTAGATTCTGCTTTCTCT
ACTGAAAATCAATTATTACCTGTTGATTACTTTAAACAGAAAATGCGTTTACGCCGTAATTTGATGACAGGTACTTGTTT
TGCTCTTATTTATGATGAAGAGCGAAGAAAAGGATTCCGATTACCTTGGTTAGATTTATTACAAGGTATTGGTGATTTGA
TGAGTTTAGAGCCATTACGTTCAAGAGTGCAGCTTCTGGAAGATGAAGAAGAGAAAGAGCAACTTGAGCGTTGGTTGTTG
CGTCAAGAGCGATCAATTTTGCATGCTATGGAGCAAACTCGTCGAGCAGGGCTTGAGTATCCTCCTTATTGGCAATAG

Upstream 100 bases:

>100_bases
TCAATAAAACTACTTTAGATCATGGTTTGGGCATTATTTCTTGCTTGATACCGAACAGTTTAAGCCATATCCTTGGAAAG
ACAACGGTTATGAGGTCATT

Downstream 100 bases:

>100_bases
CGGTAGTTATTTATCCAACTCTTAGTTAATAAGAGTTAGGATTAACAAAGAAGAGAAGTCATCTCCCTACATTGGGTTGA
TTACTTCTCTTTTTTATTTT

Product: adenylate cyclase

Products: NA

Alternate protein names: ORFXE [H]

Number of amino acids: Translated: 505; Mature: 505

Protein sequence:

>505_residues
METEIELKFFVFPEFVDTIIDKISGAKVIEQSCLNLGNIYFDTPEQHLRKHDTGLRIRRFNDERIQTLKTAGRVVAGLHQ
RPEYNADHDSDIPNVYLHPSDAWPDDIALEDLQQQLSPLFSTNFVRQQWLVAMPDGSEIELAFDQGEVISGDKTTPICEV
ELELKSGQTDALFTLARDLCSSGGMRLGNQSKAAKGYRLAMDTPADSVKPLTLVRTESSDSVETCFVNSLEHALSHWHYH
EQIYIDTQDKLALQEIRIAIAFLRQIFLVFGEMVPKRASELLRQELKWLEEELHWLDESEHLEYLIEEKGHVLRKLDARK
FLVASLKESAEALPTTDAMMKLLMSARYCGLLLDLSRWILTRDWQPFLDDKKRQVLQESIDSHSGILLDRTWEALDSAFS
TENQLLPVDYFKQKMRLRRNLMTGTCFALIYDEERRKGFRLPWLDLLQGIGDLMSLEPLRSRVQLLEDEEEKEQLERWLL
RQERSILHAMEQTRRAGLEYPPYWQ

Sequences:

>Translated_505_residues
METEIELKFFVFPEFVDTIIDKISGAKVIEQSCLNLGNIYFDTPEQHLRKHDTGLRIRRFNDERIQTLKTAGRVVAGLHQ
RPEYNADHDSDIPNVYLHPSDAWPDDIALEDLQQQLSPLFSTNFVRQQWLVAMPDGSEIELAFDQGEVISGDKTTPICEV
ELELKSGQTDALFTLARDLCSSGGMRLGNQSKAAKGYRLAMDTPADSVKPLTLVRTESSDSVETCFVNSLEHALSHWHYH
EQIYIDTQDKLALQEIRIAIAFLRQIFLVFGEMVPKRASELLRQELKWLEEELHWLDESEHLEYLIEEKGHVLRKLDARK
FLVASLKESAEALPTTDAMMKLLMSARYCGLLLDLSRWILTRDWQPFLDDKKRQVLQESIDSHSGILLDRTWEALDSAFS
TENQLLPVDYFKQKMRLRRNLMTGTCFALIYDEERRKGFRLPWLDLLQGIGDLMSLEPLRSRVQLLEDEEEKEQLERWLL
RQERSILHAMEQTRRAGLEYPPYWQ
>Mature_505_residues
METEIELKFFVFPEFVDTIIDKISGAKVIEQSCLNLGNIYFDTPEQHLRKHDTGLRIRRFNDERIQTLKTAGRVVAGLHQ
RPEYNADHDSDIPNVYLHPSDAWPDDIALEDLQQQLSPLFSTNFVRQQWLVAMPDGSEIELAFDQGEVISGDKTTPICEV
ELELKSGQTDALFTLARDLCSSGGMRLGNQSKAAKGYRLAMDTPADSVKPLTLVRTESSDSVETCFVNSLEHALSHWHYH
EQIYIDTQDKLALQEIRIAIAFLRQIFLVFGEMVPKRASELLRQELKWLEEELHWLDESEHLEYLIEEKGHVLRKLDARK
FLVASLKESAEALPTTDAMMKLLMSARYCGLLLDLSRWILTRDWQPFLDDKKRQVLQESIDSHSGILLDRTWEALDSAFS
TENQLLPVDYFKQKMRLRRNLMTGTCFALIYDEERRKGFRLPWLDLLQGIGDLMSLEPLRSRVQLLEDEEEKEQLERWLL
RQERSILHAMEQTRRAGLEYPPYWQ

Specific function: Unknown

COG id: COG3025

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1598 [H]

Homologues:

Organism=Escherichia coli, GI1789434, Length=463, Percent_Identity=35.4211663066955, Blast_Score=248, Evalue=8e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008172
- InterPro:   IPR004206 [H]

Pfam domain/function: PF01928 CYTH [H]

EC number: NA

Molecular weight: Translated: 58696; Mature: 58696

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METEIELKFFVFPEFVDTIIDKISGAKVIEQSCLNLGNIYFDTPEQHLRKHDTGLRIRRF
CCCEEEEEEEECHHHHHHHHHHCCCHHHHHHHHHHCCCEEECCCHHHHHHCCCCCEEEEC
NDERIQTLKTAGRVVAGLHQRPEYNADHDSDIPNVYLHPSDAWPDDIALEDLQQQLSPLF
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHH
STNFVRQQWLVAMPDGSEIELAFDQGEVISGDKTTPICEVELELKSGQTDALFTLARDLC
HHHHHHHCCEEECCCCCEEEEEECCCCEECCCCCCCEEEEEEEECCCCCHHHHHHHHHHH
SSGGMRLGNQSKAAKGYRLAMDTPADSVKPLTLVRTESSDSVETCFVNSLEHALSHWHYH
HCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCC
EQIYIDTQDKLALQEIRIAIAFLRQIFLVFGEMVPKRASELLRQELKWLEEELHWLDESE
CEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
HLEYLIEEKGHVLRKLDARKFLVASLKESAEALPTTDAMMKLLMSARYCGLLLDLSRWIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
TRDWQPFLDDKKRQVLQESIDSHSGILLDRTWEALDSAFSTENQLLPVDYFKQKMRLRRN
HCCCCHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
LMTGTCFALIYDEERRKGFRLPWLDLLQGIGDLMSLEPLRSRVQLLEDEEEKEQLERWLL
HHHCEEEEEEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
RQERSILHAMEQTRRAGLEYPPYWQ
HHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
METEIELKFFVFPEFVDTIIDKISGAKVIEQSCLNLGNIYFDTPEQHLRKHDTGLRIRRF
CCCEEEEEEEECHHHHHHHHHHCCCHHHHHHHHHHCCCEEECCCHHHHHHCCCCCEEEEC
NDERIQTLKTAGRVVAGLHQRPEYNADHDSDIPNVYLHPSDAWPDDIALEDLQQQLSPLF
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHH
STNFVRQQWLVAMPDGSEIELAFDQGEVISGDKTTPICEVELELKSGQTDALFTLARDLC
HHHHHHHCCEEECCCCCEEEEEECCCCEECCCCCCCEEEEEEEECCCCCHHHHHHHHHHH
SSGGMRLGNQSKAAKGYRLAMDTPADSVKPLTLVRTESSDSVETCFVNSLEHALSHWHYH
HCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCC
EQIYIDTQDKLALQEIRIAIAFLRQIFLVFGEMVPKRASELLRQELKWLEEELHWLDESE
CEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
HLEYLIEEKGHVLRKLDARKFLVASLKESAEALPTTDAMMKLLMSARYCGLLLDLSRWIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
TRDWQPFLDDKKRQVLQESIDSHSGILLDRTWEALDSAFSTENQLLPVDYFKQKMRLRRN
HCCCCHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
LMTGTCFALIYDEERRKGFRLPWLDLLQGIGDLMSLEPLRSRVQLLEDEEEKEQLERWLL
HHHCEEEEEEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
RQERSILHAMEQTRRAGLEYPPYWQ
HHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8412694; 9278503 [H]