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The map label for this gene is 59712849

Identifier: 59712849

GI number: 59712849

Start: 2518165

End: 2518842

Strand: Reverse

Name: 59712849

Synonym: VF_2242

Alternate gene names: NA

Gene position: 2518842-2518165 (Counterclockwise)

Preceding gene: 59712850

Following gene: 59712845

Centisome position: 86.93

GC content: 39.09

Gene sequence:

>678_bases
ATGTTGTCGAAATCGATATCTCCCGTACTCATTGGTGTGATTATTATTCTACCTCCGTTATCGCTTAGTGCTTATATAGT
TTGGCCTTATTATCAAGCTCAGCAGCAAGAGATCATTATTCCACCTTCTACCTATACAGAGCTTTCATTTCCAGAGGTAG
ATACTCAAAAATTACCTATTCAAGCAACGAAGCTCGCATTAGTGTCGTCAGCTAAAAATAAAGGTAATACGACTTCACCT
CCTTTGGTTTCAGAACCCGAAACAAAGGTGGTAGCAAAAAATAAAAGCATGGGGGATTCTGGTGATTTCAATGTGAATGA
ATTGGACTTGTCTGAGTTGTCTCCGGAATTGGCTGCTCGGTTTGAATCGATATTGAGCGATCCGGAACAGGAATATATTG
AACCAGAAACAGAAGAGTCCGAGATTAAGTCTGGCGTGGTCGCATTAGATAAAAATGCAGGTCAATTTATAGGTCGCCTA
CCTGCAATGAATTTTCAAACGCATAACTACACATCGAAACCAAGCCGTCGTTGGGTAAAAGTTAATGGGAAAGAAGTGAA
TATTGGTGGACACATTACATCGAATACTTCTTTGTTAGAAATTAATCCAAGAAACGTGGTTGTTGAATTTAAAGGACAGA
AAATTGAAATTCCTGCTCTGTATGAATGGAAAGGGTAA

Upstream 100 bases:

>100_bases
TTTGGTTTGAAAGAGGACGGCATTGCTGGTTCTAGTACTTTGATGTGGTTGGATAGTGTTACCAATGCAAATGCTCCGTT
ATTACAAGGAGAAGATTAAT

Downstream 100 bases:

>100_bases
TTTGTAACACATACAAAAAAGCTCAGAATAATCTGAGCTTTTTTATGTCATAAAACTTATTGATTAAGACCAACCATTTG
GTTTCTTCTTACGACTTGGG

Product: general secretion pathway protein B

Products: NA

Alternate protein names: General Secretion Pathway Protein A; Type II Secretory Pathway Component ExeA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MLSKSISPVLIGVIIILPPLSLSAYIVWPYYQAQQQEIIIPPSTYTELSFPEVDTQKLPIQATKLALVSSAKNKGNTTSP
PLVSEPETKVVAKNKSMGDSGDFNVNELDLSELSPELAARFESILSDPEQEYIEPETEESEIKSGVVALDKNAGQFIGRL
PAMNFQTHNYTSKPSRRWVKVNGKEVNIGGHITSNTSLLEINPRNVVVEFKGQKIEIPALYEWKG

Sequences:

>Translated_225_residues
MLSKSISPVLIGVIIILPPLSLSAYIVWPYYQAQQQEIIIPPSTYTELSFPEVDTQKLPIQATKLALVSSAKNKGNTTSP
PLVSEPETKVVAKNKSMGDSGDFNVNELDLSELSPELAARFESILSDPEQEYIEPETEESEIKSGVVALDKNAGQFIGRL
PAMNFQTHNYTSKPSRRWVKVNGKEVNIGGHITSNTSLLEINPRNVVVEFKGQKIEIPALYEWKG
>Mature_225_residues
MLSKSISPVLIGVIIILPPLSLSAYIVWPYYQAQQQEIIIPPSTYTELSFPEVDTQKLPIQATKLALVSSAKNKGNTTSP
PLVSEPETKVVAKNKSMGDSGDFNVNELDLSELSPELAARFESILSDPEQEYIEPETEESEIKSGVVALDKNAGQFIGRL
PAMNFQTHNYTSKPSRRWVKVNGKEVNIGGHITSNTSLLEINPRNVVVEFKGQKIEIPALYEWKG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24869; Mature: 24869

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSKSISPVLIGVIIILPPLSLSAYIVWPYYQAQQQEIIIPPSTYTELSFPEVDTQKLPI
CCCCCCCHHHHHHHHHCCCCCCEEEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCC
QATKLALVSSAKNKGNTTSPPLVSEPETKVVAKNKSMGDSGDFNVNELDLSELSPELAAR
HHHHEEEEHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEECHHHCCHHHHHH
FESILSDPEQEYIEPETEESEIKSGVVALDKNAGQFIGRLPAMNFQTHNYTSKPSRRWVK
HHHHHCCCHHHHCCCCCCHHHHHCCEEEEECCCCHHHHCCCCCCEECCCCCCCCCCEEEE
VNGKEVNIGGHITSNTSLLEINPRNVVVEFKGQKIEIPALYEWKG
ECCEEEEECCEEECCCEEEEECCCEEEEEECCCEEECCEEEECCC
>Mature Secondary Structure
MLSKSISPVLIGVIIILPPLSLSAYIVWPYYQAQQQEIIIPPSTYTELSFPEVDTQKLPI
CCCCCCCHHHHHHHHHCCCCCCEEEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCC
QATKLALVSSAKNKGNTTSPPLVSEPETKVVAKNKSMGDSGDFNVNELDLSELSPELAAR
HHHHEEEEHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEECHHHCCHHHHHH
FESILSDPEQEYIEPETEESEIKSGVVALDKNAGQFIGRLPAMNFQTHNYTSKPSRRWVK
HHHHHCCCHHHHCCCCCCHHHHHCCEEEEECCCCHHHHCCCCCCEECCCCCCCCCCEEEE
VNGKEVNIGGHITSNTSLLEINPRNVVVEFKGQKIEIPALYEWKG
ECCEEEEECCEEECCCEEEEECCCEEEEEECCCEEECCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA