| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is ftsZ [H]
Identifier: 59712803
GI number: 59712803
Start: 2467642
End: 2468892
Strand: Reverse
Name: ftsZ [H]
Synonym: VF_2196
Alternate gene names: 59712803
Gene position: 2468892-2467642 (Counterclockwise)
Preceding gene: 59712804
Following gene: 59712802
Centisome position: 85.21
GC content: 44.52
Gene sequence:
>1251_bases ATGTTTGAGCCGATGATGGAAATGTCCGACGACGCAGTAATTAAAGTTGTTGGTGTAGGTGGCGGTGGCGGTAATGCTAT CGAGCACATGGTACGAGAATCAATTGAAGGCGTTGAGTTCATCAGTGTAAATACTGATGCACAAGCGCTTCGTAAAACGA GCGTGAACACCGTTATTCAAATTGGTGGCGACATCACTAAAGGATTAGGTGCTGGTGCAAACCCGCAAGTAGGCCGTGAT GCAGCTCTAGAAGACCGTGAAGCACTGAAAGAAGTGTTAGCGGGCGCTGATATGGTATTTATCGCAGCTGGTATGGGCGG CGGTACAGGTACTGGTGCAGCTCCTATTATTGCTGAAGTTGCTAAAGAATTAAATATTCTAACAGTTGCTGTGGTTACAA AACCATTTAGCTTTGAAGGTCGTAAGCGTCTTGCTTTTGCTGAGCAAGGTATCGAAGAGTTATCAAAACATGTTGACTCA TTAATTACGATTCCAAACGAAAAATTATTAAAAGTTCTTGGCCGTGGTATTACGTTATTAGAAGCATTTGCAAAAGCGAA TGATGTTCTTCGTAATGCTGTTCAAGGTATCGCAGAACTTATTACTCGTCCTGGTATGATCAACGTCGATTTCGCCGATG TTCGTACAGTTATGTCTGAAATGGGACATGCAATGATGGGTAGCGGTATCGCAGTAGGCGAAGATCGTGCAGAACAAGCA GCAGAAGAAGCGATTTCAAGTCCGTTACTTGAAGATATCGATCTTGCTGGTGCTCGTGGTGTTCTTGTTAACATCACTGC AGGTTTAGATATGCGTCTTGATGAATTTGAAACTGTTGGTAATACAGTGAAAGCATTTGCATCAGATAACGCAACGGTTG TTATTGGTACTTCTCTTGATCCTGATATGAGTGACGAAATTCGCGTAACGGTTGTTGCTACAGGTATCGGTACTGAAAAA AAGCCTGAAATCACGTTAGTGACGAATAAAGCAGCGGCTCCTGCTCAATCGGCTCCAGCAGCGCAACCTGCGGTTCAAGC ACAAGTAAAACCAAAAGTTGAAGCTCCAGTTGAACCTGTGGTTGAAAAAGCGGCACAAAACGTGCAAGTAACTAAACCAG CAGCACAGCCATCTGCGCCATCTACATCACCAGCGGCTGGTGTTCAGAATGCGGGTGCGGCACAAGCTAAGCCAGATCAG AAAGAAGATTATTTAGATATCCCAGCGTTTTTACGACGCCAAGCTGACTAA
Upstream 100 bases:
>100_bases CAAGTAAGAGCCAATCTTTTACTACCGTAATAAAGAAATTTAAAAATTGGATACTAAAAGAGTTTTAACCTGAGCGAACA GGAAGAAACGGAGAGAACAA
Downstream 100 bases:
>100_bases TTAATCATCAAACGATTTGGTTTTATGAAAAATTGTGTGCTAGAATGTCAGACCAGTTCTTAGAATTGGTTTGAAATTAA GCATATTTATAGTTGAGATG
Product: cell division protein FtsZ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 416; Mature: 416
Protein sequence:
>416_residues MFEPMMEMSDDAVIKVVGVGGGGGNAIEHMVRESIEGVEFISVNTDAQALRKTSVNTVIQIGGDITKGLGAGANPQVGRD AALEDREALKEVLAGADMVFIAAGMGGGTGTGAAPIIAEVAKELNILTVAVVTKPFSFEGRKRLAFAEQGIEELSKHVDS LITIPNEKLLKVLGRGITLLEAFAKANDVLRNAVQGIAELITRPGMINVDFADVRTVMSEMGHAMMGSGIAVGEDRAEQA AEEAISSPLLEDIDLAGARGVLVNITAGLDMRLDEFETVGNTVKAFASDNATVVIGTSLDPDMSDEIRVTVVATGIGTEK KPEITLVTNKAAAPAQSAPAAQPAVQAQVKPKVEAPVEPVVEKAAQNVQVTKPAAQPSAPSTSPAAGVQNAGAAQAKPDQ KEDYLDIPAFLRRQAD
Sequences:
>Translated_416_residues MFEPMMEMSDDAVIKVVGVGGGGGNAIEHMVRESIEGVEFISVNTDAQALRKTSVNTVIQIGGDITKGLGAGANPQVGRD AALEDREALKEVLAGADMVFIAAGMGGGTGTGAAPIIAEVAKELNILTVAVVTKPFSFEGRKRLAFAEQGIEELSKHVDS LITIPNEKLLKVLGRGITLLEAFAKANDVLRNAVQGIAELITRPGMINVDFADVRTVMSEMGHAMMGSGIAVGEDRAEQA AEEAISSPLLEDIDLAGARGVLVNITAGLDMRLDEFETVGNTVKAFASDNATVVIGTSLDPDMSDEIRVTVVATGIGTEK KPEITLVTNKAAAPAQSAPAAQPAVQAQVKPKVEAPVEPVVEKAAQNVQVTKPAAQPSAPSTSPAAGVQNAGAAQAKPDQ KEDYLDIPAFLRRQAD >Mature_416_residues MFEPMMEMSDDAVIKVVGVGGGGGNAIEHMVRESIEGVEFISVNTDAQALRKTSVNTVIQIGGDITKGLGAGANPQVGRD AALEDREALKEVLAGADMVFIAAGMGGGTGTGAAPIIAEVAKELNILTVAVVTKPFSFEGRKRLAFAEQGIEELSKHVDS LITIPNEKLLKVLGRGITLLEAFAKANDVLRNAVQGIAELITRPGMINVDFADVRTVMSEMGHAMMGSGIAVGEDRAEQA AEEAISSPLLEDIDLAGARGVLVNITAGLDMRLDEFETVGNTVKAFASDNATVVIGTSLDPDMSDEIRVTVVATGIGTEK KPEITLVTNKAAAPAQSAPAAQPAVQAQVKPKVEAPVEPVVEKAAQNVQVTKPAAQPSAPSTSPAAGVQNAGAAQAKPDQ KEDYLDIPAFLRRQAD
Specific function: This protein is essential to the cell-division process. It seems to assemble into a dynamic ring on the inner surface of the cytoplasmic membrane at the place where division will occur, and the formation of the ring is the signal for septation to begin. B
COG id: COG0206
COG function: function code D; Cell division GTPase
Gene ontology:
Cell location: Cytoplasm. Note=Assembles at the inner surface of the cytoplasmic membrane (By similarity) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ftsZ family [H]
Homologues:
Organism=Escherichia coli, GI1786284, Length=416, Percent_Identity=72.1153846153846, Blast_Score=520, Evalue=1e-149,
Paralogues:
None
Copy number: 320 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020805 - InterPro: IPR000158 - InterPro: IPR008280 - InterPro: IPR018316 - InterPro: IPR003008 [H]
Pfam domain/function: PF00091 Tubulin [H]
EC number: NA
Molecular weight: Translated: 43191; Mature: 43191
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: PS01134 FTSZ_1 ; PS01135 FTSZ_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFEPMMEMSDDAVIKVVGVGGGGGNAIEHMVRESIEGVEFISVNTDAQALRKTSVNTVIQ CCCCCHHCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHCCHHEEE IGGDITKGLGAGANPQVGRDAALEDREALKEVLAGADMVFIAAGMGGGTGTGAAPIIAEV ECCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHH AKELNILTVAVVTKPFSFEGRKRLAFAEQGIEELSKHVDSLITIPNEKLLKVLGRGITLL HHHCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHH EAFAKANDVLRNAVQGIAELITRPGMINVDFADVRTVMSEMGHAMMGSGIAVGEDRAEQA HHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHCHHHHCCCCCCCCHHHHHH AEEAISSPLLEDIDLAGARGVLVNITAGLDMRLDEFETVGNTVKAFASDNATVVIGTSLD HHHHHHCCCHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCC PDMSDEIRVTVVATGIGTEKKPEITLVTNKAAAPAQSAPAAQPAVQAQVKPKVEAPVEPV CCCCCCEEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHH VEKAAQNVQVTKPAAQPSAPSTSPAAGVQNAGAAQAKPDQKEDYLDIPAFLRRQAD HHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCC >Mature Secondary Structure MFEPMMEMSDDAVIKVVGVGGGGGNAIEHMVRESIEGVEFISVNTDAQALRKTSVNTVIQ CCCCCHHCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHCCHHEEE IGGDITKGLGAGANPQVGRDAALEDREALKEVLAGADMVFIAAGMGGGTGTGAAPIIAEV ECCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHH AKELNILTVAVVTKPFSFEGRKRLAFAEQGIEELSKHVDSLITIPNEKLLKVLGRGITLL HHHCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHH EAFAKANDVLRNAVQGIAELITRPGMINVDFADVRTVMSEMGHAMMGSGIAVGEDRAEQA HHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHCHHHHCCCCCCCCHHHHHH AEEAISSPLLEDIDLAGARGVLVNITAGLDMRLDEFETVGNTVKAFASDNATVVIGTSLD HHHHHHCCCHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCC PDMSDEIRVTVVATGIGTEKKPEITLVTNKAAAPAQSAPAAQPAVQAQVKPKVEAPVEPV CCCCCCEEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHH VEKAAQNVQVTKPAAQPSAPSTSPAAGVQNAGAAQAKPDQKEDYLDIPAFLRRQAD HHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11443086 [H]