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The map label for this gene is pilA [H]

Identifier: 59712792

GI number: 59712792

Start: 2456516

End: 2456920

Strand: Direct

Name: pilA [H]

Synonym: VF_2185

Alternate gene names: 59712792

Gene position: 2456516-2456920 (Clockwise)

Preceding gene: 59712791

Following gene: 59712793

Centisome position: 84.78

GC content: 39.01

Gene sequence:

>405_bases
ATGAAAAAGCGTCAAGGACAGAAAGGTTTTACCCTAATTGAATTAATGATTGTAGTTGCCGTAATTGGTGTGTTATCAGC
AATTGCGATTCCTAAATATCAAGAGTTTGCTAAAAAAGGAGCTGTCGCTTCTGGTATTGCAACTCTTTCGGCACTAAAAA
CAAATGTCGAAGACCATATGGCTACCAACGGCTCTTTTCCTGCCAATATTACTGACATTGGAGCTATTGATTCTAGCATT
GGTGTAGTCGCTTTTGATGGAACTGTAAGTAATGGAATTAAAATAACGTTCAATGATGGGGCAGTGAGTGGCTCAACAGT
GACCATATCTCGTCAAGACACTGGAAAATGGGATTGTCAATATTCTGTAAGTGATTTAAATATCCCAGGCTGTCAAGGCC
AATAA

Upstream 100 bases:

>100_bases
TCGAAAGCCTCTCTTTTCTCCCTACCATATCTCTCTATTCGTTTTATTATTTTACGCATCAAATAAAACATGAATCACCC
GATTCATCTTGGAGAGAAAA

Downstream 100 bases:

>100_bases
ATACCCATGCACACCAACCTCGCCTCTATCTTGCGTCAAGCTGAGTTAATCAGTGCGACGCAAGAAAGCAGTATCATAGA
GTCAGTTCAAGCAGAAACGC

Product: pilin subunit PilA

Products: NA

Alternate protein names: Pilin [H]

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MKKRQGQKGFTLIELMIVVAVIGVLSAIAIPKYQEFAKKGAVASGIATLSALKTNVEDHMATNGSFPANITDIGAIDSSI
GVVAFDGTVSNGIKITFNDGAVSGSTVTISRQDTGKWDCQYSVSDLNIPGCQGQ

Sequences:

>Translated_134_residues
MKKRQGQKGFTLIELMIVVAVIGVLSAIAIPKYQEFAKKGAVASGIATLSALKTNVEDHMATNGSFPANITDIGAIDSSI
GVVAFDGTVSNGIKITFNDGAVSGSTVTISRQDTGKWDCQYSVSDLNIPGCQGQ
>Mature_134_residues
MKKRQGQKGFTLIELMIVVAVIGVLSAIAIPKYQEFAKKGAVASGIATLSALKTNVEDHMATNGSFPANITDIGAIDSSI
GVVAFDGTVSNGIKITFNDGAVSGSTVTISRQDTGKWDCQYSVSDLNIPGCQGQ

Specific function: Not Yet Known. [C]

COG id: COG4969

COG function: function code NU; Tfp pilus assembly protein, major pilin PilA

Gene ontology:

Cell location: Fimbrium [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N-Me-Phe pilin family [H]

Homologues:

Organism=Escherichia coli, GI1786297, Length=115, Percent_Identity=33.0434782608696, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000983
- InterPro:   IPR001082
- InterPro:   IPR012902
- InterPro:   IPR001120 [H]

Pfam domain/function: PF07963 N_methyl; PF00114 Pilin [H]

EC number: NA

Molecular weight: Translated: 13939; Mature: 13939

Theoretical pI: Translated: 7.26; Mature: 7.26

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRQGQKGFTLIELMIVVAVIGVLSAIAIPKYQEFAKKGAVASGIATLSALKTNVEDHM
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHCHHHHH
ATNGSFPANITDIGAIDSSIGVVAFDGTVSNGIKITFNDGAVSGSTVTISRQDTGKWDCQ
CCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEECCCCCCCCEEEEECCCCCCEEEE
YSVSDLNIPGCQGQ
EECCCCCCCCCCCC
>Mature Secondary Structure
MKKRQGQKGFTLIELMIVVAVIGVLSAIAIPKYQEFAKKGAVASGIATLSALKTNVEDHM
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHCHHHHH
ATNGSFPANITDIGAIDSSIGVVAFDGTVSNGIKITFNDGAVSGSTVTISRQDTGKWDCQ
CCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEECCCCCCCCEEEEECCCCCCEEEE
YSVSDLNIPGCQGQ
EECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7905475 [H]