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The map label for this gene is rseA [H]

Identifier: 59712699

GI number: 59712699

Start: 2329434

End: 2330051

Strand: Reverse

Name: rseA [H]

Synonym: VF_2092

Alternate gene names: 59712699

Gene position: 2330051-2329434 (Counterclockwise)

Preceding gene: 59712700

Following gene: 172087752

Centisome position: 80.41

GC content: 41.42

Gene sequence:

>618_bases
ATGACTGATAAAGAACAAATATCTGCGTTTATAGATAATGAAGAGATGGACAACGCGTTCATTGAATCCTTATCAAACAC
TGAAAATGCAGAGACTTGGAAAAATTACCATTTAATTGGTGATGTTATGAGAGGCGATGCGCCTGACAGCAAAGAATGGA
ATATTGCTGCCAACGTTGCTCTCGCTCTTGAGGATGAACCCGCTCATTCTATGAATGATACGGTGACGGAATTTATGCCG
TCGCAACCTACACCAAGTGAAGCAAAGAAGACATTACCTAGTTGGTTAACTCAATTTGGCCAAGTAGCCATGGCTGCCTG
CTTCTCGTTGGTTGTTATTGTTGGTGTTCAGCAATATAACGGTTCAGAACCAAGTGCAATTCCTGCTAGTGGGGATATTC
AAGTGCTTGATACCATTCCGTTTAGCGGCAGTGCTGAGCCTGTGAGTTTAACGCGTGATTCCTTAGTGAATAAAACGTCG
AATGAAGCGGATGTAATGGAGCAACGTAAACGTATTAATGCGATGCTACAAGATTATGAATTACAACTTCGTTTGAATGC
TCACGATGGTTCGATTGATAGAGAGCTGTTAGAACAAAATTCAACATTGGCAGAATAG

Upstream 100 bases:

>100_bases
CGGTTCGTTCGCGTATTTTCCGAGCTCGTGAAGTTGTTGAGAAAAAAATCCAACCGCTAATGCAGCGTTAATTATTTCCA
ACGGTCAAACGGTGAAGACA

Downstream 100 bases:

>100_bases
ATGAAACGTATCCTGATCAGCTTTATTGCATTGGTCAGCTTCTTTCCAATAATGGCCTCAGCTGAAGAAAAACCTTCTGC
TGAGGCTTTGTTGCATCTGA

Product: anti-sigmaE factor, inner membrane

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 204

Protein sequence:

>205_residues
MTDKEQISAFIDNEEMDNAFIESLSNTENAETWKNYHLIGDVMRGDAPDSKEWNIAANVALALEDEPAHSMNDTVTEFMP
SQPTPSEAKKTLPSWLTQFGQVAMAACFSLVVIVGVQQYNGSEPSAIPASGDIQVLDTIPFSGSAEPVSLTRDSLVNKTS
NEADVMEQRKRINAMLQDYELQLRLNAHDGSIDRELLEQNSTLAE

Sequences:

>Translated_205_residues
MTDKEQISAFIDNEEMDNAFIESLSNTENAETWKNYHLIGDVMRGDAPDSKEWNIAANVALALEDEPAHSMNDTVTEFMP
SQPTPSEAKKTLPSWLTQFGQVAMAACFSLVVIVGVQQYNGSEPSAIPASGDIQVLDTIPFSGSAEPVSLTRDSLVNKTS
NEADVMEQRKRINAMLQDYELQLRLNAHDGSIDRELLEQNSTLAE
>Mature_204_residues
TDKEQISAFIDNEEMDNAFIESLSNTENAETWKNYHLIGDVMRGDAPDSKEWNIAANVALALEDEPAHSMNDTVTEFMPS
QPTPSEAKKTLPSWLTQFGQVAMAACFSLVVIVGVQQYNGSEPSAIPASGDIQVLDTIPFSGSAEPVSLTRDSLVNKTSN
EADVMEQRKRINAMLQDYELQLRLNAHDGSIDRELLEQNSTLAE

Specific function: Negative regulator of rpoE [H]

COG id: COG3073

COG function: function code T; Negative regulator of sigma E activity

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rseA family [H]

Homologues:

Organism=Escherichia coli, GI1788925, Length=194, Percent_Identity=43.8144329896907, Blast_Score=127, Evalue=8e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005573
- InterPro:   IPR005572 [H]

Pfam domain/function: PF03873 RseA_C; PF03872 RseA_N [H]

EC number: NA

Molecular weight: Translated: 22609; Mature: 22478

Theoretical pI: Translated: 3.97; Mature: 3.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDKEQISAFIDNEEMDNAFIESLSNTENAETWKNYHLIGDVMRGDAPDSKEWNIAANVA
CCCHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEE
LALEDEPAHSMNDTVTEFMPSQPTPSEAKKTLPSWLTQFGQVAMAACFSLVVIVGVQQYN
EEECCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GSEPSAIPASGDIQVLDTIPFSGSAEPVSLTRDSLVNKTSNEADVMEQRKRINAMLQDYE
CCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCEE
LQLRLNAHDGSIDRELLEQNSTLAE
EEEEEECCCCCHHHHHHHCCCCCCC
>Mature Secondary Structure 
TDKEQISAFIDNEEMDNAFIESLSNTENAETWKNYHLIGDVMRGDAPDSKEWNIAANVA
CCHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEE
LALEDEPAHSMNDTVTEFMPSQPTPSEAKKTLPSWLTQFGQVAMAACFSLVVIVGVQQYN
EEECCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GSEPSAIPASGDIQVLDTIPFSGSAEPVSLTRDSLVNKTSNEADVMEQRKRINAMLQDYE
CCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCEE
LQLRLNAHDGSIDRELLEQNSTLAE
EEEEEECCCCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]