| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59712625
Identifier: 59712625
GI number: 59712625
Start: 2251266
End: 2251499
Strand: Reverse
Name: 59712625
Synonym: VF_2018
Alternate gene names: NA
Gene position: 2251499-2251266 (Counterclockwise)
Preceding gene: 59712626
Following gene: 59712624
Centisome position: 77.7
GC content: 38.46
Gene sequence:
>234_bases ATGCCGGAGAAAGATATTGCACGTATTGATGTAACGATGAGTCATCTTGTCGAATTAACGCGTGAGCAAAATACAACATT AAAAAAGGTTCTTGAAATGCTAACAGAGACTCGTACAAAGCAAGAGTCACATTCTGAGCGCATAGGTAAATTAGAATCAG ATAAAACATGGTTAGTAAGATTAATACTGGCCGCACTCATCACAGCAATCGTTGCTGCAGTTAAGGCGTTATAA
Upstream 100 bases:
>100_bases GTGCGGGGTTTTCTACATTTGGAATATAGGATTTTCATCAATATTAACTACTTTACGCGCGCGATACACTGAGCACTAAC GTTATCACATTGAGTCAATT
Downstream 100 bases:
>100_bases AATGAATAAATTCAGTAAAACAAGCGCGGCACGTTTAGCTACTTGCCACCCTGATTTAATAAAAGTATTCACTCGCGTTC TTGAGCTTTGCGACTGCTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 77; Mature: 76
Protein sequence:
>77_residues MPEKDIARIDVTMSHLVELTREQNTTLKKVLEMLTETRTKQESHSERIGKLESDKTWLVRLILAALITAIVAAVKAL
Sequences:
>Translated_77_residues MPEKDIARIDVTMSHLVELTREQNTTLKKVLEMLTETRTKQESHSERIGKLESDKTWLVRLILAALITAIVAAVKAL >Mature_76_residues PEKDIARIDVTMSHLVELTREQNTTLKKVLEMLTETRTKQESHSERIGKLESDKTWLVRLILAALITAIVAAVKAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8727; Mature: 8596
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEKDIARIDVTMSHLVELTREQNTTLKKVLEMLTETRTKQESHSERIGKLESDKTWLVR CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH LILAALITAIVAAVKAL HHHHHHHHHHHHHHHCC >Mature Secondary Structure PEKDIARIDVTMSHLVELTREQNTTLKKVLEMLTETRTKQESHSERIGKLESDKTWLVR CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH LILAALITAIVAAVKAL HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA