| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59712626
Identifier: 59712626
GI number: 59712626
Start: 2251635
End: 2252090
Strand: Reverse
Name: 59712626
Synonym: VF_2019
Alternate gene names: NA
Gene position: 2252090-2251635 (Counterclockwise)
Preceding gene: 59712627
Following gene: 59712625
Centisome position: 77.72
GC content: 38.6
Gene sequence:
>456_bases ATGAGTGAAATTAAACTAATAAGCGCAACTAACTTATCATTTGCAAATGAAGATAAAACAGCGATTTTCATGACTGTAGA AGTTGATGGCGTTACTGAAATCACAGAGCCAGTTGAGTTTGTTGCTTCGGCTTTTGATGTTATGTCTCACGGCGTTGAGT GGTATAAGCGAGCAAGACTTGGCGAGTTCGGAATAATTAAGCAGTACGAACCGTACATTCCAACAGAAGAAGATTTACTT AATGAAGCAATAACATTATTTGGTTCAGAGAAAGCAGTCGCTATACGTGTTGAAGAGGATTATCGCTTAGAGCTCGCTGA TATTTCAGATGAACAAATGCGAGAAGTAAAAGAATACATAAGAGCGATAAATCCAACAGCGGCGACTAGAAGTATACCAA TTCGACCAGATATTATGAATCGATACGCTCCGCAAAATGCAACCTTAGAAGAGTAA
Upstream 100 bases:
>100_bases GTGGGCATAAAGGCTCATACTTGGCTGGTACATGGTCAGCGAAAGGTAGAGCTGCGACTATTGATGGTGTTGGTCAGAGA TTGTATCAAAGGGTTCTATA
Downstream 100 bases:
>100_bases AACTATATTTATCTCTCCCACCAAGCCCTGCCATTGTGCGGGGTTTTCTACATTTGGAATATAGGATTTTCATCAATATT AACTACTTTACGCGCGCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MSEIKLISATNLSFANEDKTAIFMTVEVDGVTEITEPVEFVASAFDVMSHGVEWYKRARLGEFGIIKQYEPYIPTEEDLL NEAITLFGSEKAVAIRVEEDYRLELADISDEQMREVKEYIRAINPTAATRSIPIRPDIMNRYAPQNATLEE
Sequences:
>Translated_151_residues MSEIKLISATNLSFANEDKTAIFMTVEVDGVTEITEPVEFVASAFDVMSHGVEWYKRARLGEFGIIKQYEPYIPTEEDLL NEAITLFGSEKAVAIRVEEDYRLELADISDEQMREVKEYIRAINPTAATRSIPIRPDIMNRYAPQNATLEE >Mature_150_residues SEIKLISATNLSFANEDKTAIFMTVEVDGVTEITEPVEFVASAFDVMSHGVEWYKRARLGEFGIIKQYEPYIPTEEDLLN EAITLFGSEKAVAIRVEEDYRLELADISDEQMREVKEYIRAINPTAATRSIPIRPDIMNRYAPQNATLEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17182; Mature: 17050
Theoretical pI: Translated: 4.15; Mature: 4.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEIKLISATNLSFANEDKTAIFMTVEVDGVTEITEPVEFVASAFDVMSHGVEWYKRARL CCCEEEEEECCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GEFGIIKQYEPYIPTEEDLLNEAITLFGSEKAVAIRVEEDYRLELADISDEQMREVKEYI CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCHHHHHHHHHHH RAINPTAATRSIPIRPDIMNRYAPQNATLEE HHCCCCCCCCCCCCCHHHHHHCCCCCCCCCC >Mature Secondary Structure SEIKLISATNLSFANEDKTAIFMTVEVDGVTEITEPVEFVASAFDVMSHGVEWYKRARL CCEEEEEECCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GEFGIIKQYEPYIPTEEDLLNEAITLFGSEKAVAIRVEEDYRLELADISDEQMREVKEYI CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCHHHHHHHHHHH RAINPTAATRSIPIRPDIMNRYAPQNATLEE HHCCCCCCCCCCCCCHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA