| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59712624
Identifier: 59712624
GI number: 59712624
Start: 2250875
End: 2251264
Strand: Reverse
Name: 59712624
Synonym: VF_2017
Alternate gene names: NA
Gene position: 2251264-2250875 (Counterclockwise)
Preceding gene: 59712625
Following gene: 172087741
Centisome position: 77.7
GC content: 42.31
Gene sequence:
>390_bases ATGAATAAATTCAGTAAAACAAGCGCGGCACGTTTAGCTACTTGCCACCCTGATTTAATAAAAGTATTCACTCGCGTTCT TGAGCTTTGCGACTGCTCCATTCTTTGTGGCCATCGAACAGAAGAAGAGCAAAATACTGCATTTGCGGAAGGTAAAAGCC AGGTGAAATATCCAAATGGCAAACACAACACATTACCAAGTCGCGCTGTTGATGTTGCCCCTTATCCTATCGACTGGAAT GACCGAGAGCGATTCAGTTACTTTGCTGGTTTAGTTGTTGGTGTTGGTGTATCAATGGGGGTTGCGATCCGTTGGGGCGG TGACTGGGATAAAGATAATGAACTTAAAGACAATAACTTTGATGACTTAGTGCATTTTGAATTGTGTTAA
Upstream 100 bases:
>100_bases GAGCGCATAGGTAAATTAGAATCAGATAAAACATGGTTAGTAAGATTAATACTGGCCGCACTCATCACAGCAATCGTTGC TGCAGTTAAGGCGTTATAAA
Downstream 100 bases:
>100_bases ATGACATGCACCAGCGCATTGAAAAATGGCGGTTATGGCCAAAGCTAATGAGCTTATTTGTCGGTTACATGTGGCTTGAG TTTAACGATTATTTTTTTGC
Product: L-alanyl-D-glutamate peptidase
Products: NA
Alternate protein names: L-Alanyl-D-Glutamate Peptidase
Number of amino acids: Translated: 129; Mature: 129
Protein sequence:
>129_residues MNKFSKTSAARLATCHPDLIKVFTRVLELCDCSILCGHRTEEEQNTAFAEGKSQVKYPNGKHNTLPSRAVDVAPYPIDWN DRERFSYFAGLVVGVGVSMGVAIRWGGDWDKDNELKDNNFDDLVHFELC
Sequences:
>Translated_129_residues MNKFSKTSAARLATCHPDLIKVFTRVLELCDCSILCGHRTEEEQNTAFAEGKSQVKYPNGKHNTLPSRAVDVAPYPIDWN DRERFSYFAGLVVGVGVSMGVAIRWGGDWDKDNELKDNNFDDLVHFELC >Mature_129_residues MNKFSKTSAARLATCHPDLIKVFTRVLELCDCSILCGHRTEEEQNTAFAEGKSQVKYPNGKHNTLPSRAVDVAPYPIDWN DRERFSYFAGLVVGVGVSMGVAIRWGGDWDKDNELKDNNFDDLVHFELC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14539; Mature: 14539
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKFSKTSAARLATCHPDLIKVFTRVLELCDCSILCGHRTEEEQNTAFAEGKSQVKYPNG CCCCCCCCHHHHCCCCHHHHHHHHHHHHHHCCCEECCCCCCCCCCHHHHCCCCCCCCCCC KHNTLPSRAVDVAPYPIDWNDRERFSYFAGLVVGVGVSMGVAIRWGGDWDKDNELKDNNF CCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCC DDLVHFELC CCEEEEECC >Mature Secondary Structure MNKFSKTSAARLATCHPDLIKVFTRVLELCDCSILCGHRTEEEQNTAFAEGKSQVKYPNG CCCCCCCCHHHHCCCCHHHHHHHHHHHHHHCCCEECCCCCCCCCCHHHHCCCCCCCCCCC KHNTLPSRAVDVAPYPIDWNDRERFSYFAGLVVGVGVSMGVAIRWGGDWDKDNELKDNNF CCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCC DDLVHFELC CCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA