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The map label for this gene is flaC [H]

Identifier: 59712471

GI number: 59712471

Start: 2096063

End: 2097196

Strand: Reverse

Name: flaC [H]

Synonym: VF_1864

Alternate gene names: 59712471

Gene position: 2097196-2096063 (Counterclockwise)

Preceding gene: 59712472

Following gene: 59712470

Centisome position: 72.38

GC content: 41.18

Gene sequence:

>1134_bases
ATGTCGATTACAGTAAATACTAACGTATCAGCAATGACAGCTCAGCGTTACTTGAACAATGCAACGGATGGCGTGAATCA
ATCAATGGAACGTCTATCTTCTGGCTTTAAAATCAACAGCGCAAAAGATGATGCTGCTGGCCTACAGATTTCAAACCGTT
TGACTTCACAATCTCGTGGCTTAGATGTAGCTGTACGCAATGCAAACGATGGTATTTCAATTGCACAAACAGCTGAAGGT
GCAATGAATGAGTCAACAAACATCTTACAACGTATGCGTGACTTATCACTACAATCAGCAAACGGTTCAAATACAACTTC
TGACCGTGAAGCGATTCAACAAGAAGTCGGTGCGCTTAATGATGAGCTGAACCGTATTGCTGAAACAACCTCTTTCGGTG
GTTCTCGTCTTCTTAATGGTCAATTTGGTACTAAATCATTCCAAATTGGTGCTGATTCAGGTGAAGCGGTAATGCTTAGT
CTTAACAACATGCGTTCAGACTCTGCATCAATGGGCGGAACAAGCTATAAAGCAGAAACGGCACTGGGTGGTGATTGGGC
TGTAAATGCTGAGAAATCAGAATTGACTGTTTCTTATGTAAACCGTGCAGGTGAAGAGAAAGAGTTAACGATTAATGCTA
AGTCTGGTGATGATATTGAGCAAGTAGCGACTTACATCAATGGTCAAACAGATGCGATTAATGCGTCAGTATCAGAAAAT
GGTGAGCTACAAATTGTAACCTCTAACGATAAAGTTCAAGGTGAAGTTAAATTTGGTGGTTCATTAGCTGGTGAACTGAA
TATGGGGGCAGCACAGGCTGAGACGGTTAAGAGCATAGACGTAACTACGGTAGGTGGTTCTCAGAAGGCTGTGGCTATTC
TGGATGCAGCAATGCAATTTGTTGATTCAAACCGTGCTGACTTGGGTGCATTCCAAAACCGATTTAGCCATGCGATAAAT
AACCTAGATAACATTAATGAAAATGTTTCAGCATCTAATAGCCGAATTAAAGATGTAGACTTTGCTAAAGAAACAACTGA
GATGACGAAATCTCAGATTCTTCAACAAGCAAGTTCTTCTATTTTAGCTCAAGCTAAGCAAGCGCCTAACGCTGCTCTTG
GTCTATTACGCTAA

Upstream 100 bases:

>100_bases
TAAGTATCAGGCACTAATAGCAATCAATTTAGTGTCGAATAATAAAGCTCAGTTTTCCGAACTACGGAAAACAATCGGAA
AACTAAACGGAGATACCACT

Downstream 100 bases:

>100_bases
TTTATTAGGCGATTTAAACAACTTCTAAGGTAATAGTGCTCTCACACTATGCCAAAGCCGGGGCTTGCCTCGGCTTTTTT
TGTTTATAAAACCATCAATA

Product: flagellin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 376

Protein sequence:

>377_residues
MSITVNTNVSAMTAQRYLNNATDGVNQSMERLSSGFKINSAKDDAAGLQISNRLTSQSRGLDVAVRNANDGISIAQTAEG
AMNESTNILQRMRDLSLQSANGSNTTSDREAIQQEVGALNDELNRIAETTSFGGSRLLNGQFGTKSFQIGADSGEAVMLS
LNNMRSDSASMGGTSYKAETALGGDWAVNAEKSELTVSYVNRAGEEKELTINAKSGDDIEQVATYINGQTDAINASVSEN
GELQIVTSNDKVQGEVKFGGSLAGELNMGAAQAETVKSIDVTTVGGSQKAVAILDAAMQFVDSNRADLGAFQNRFSHAIN
NLDNINENVSASNSRIKDVDFAKETTEMTKSQILQQASSSILAQAKQAPNAALGLLR

Sequences:

>Translated_377_residues
MSITVNTNVSAMTAQRYLNNATDGVNQSMERLSSGFKINSAKDDAAGLQISNRLTSQSRGLDVAVRNANDGISIAQTAEG
AMNESTNILQRMRDLSLQSANGSNTTSDREAIQQEVGALNDELNRIAETTSFGGSRLLNGQFGTKSFQIGADSGEAVMLS
LNNMRSDSASMGGTSYKAETALGGDWAVNAEKSELTVSYVNRAGEEKELTINAKSGDDIEQVATYINGQTDAINASVSEN
GELQIVTSNDKVQGEVKFGGSLAGELNMGAAQAETVKSIDVTTVGGSQKAVAILDAAMQFVDSNRADLGAFQNRFSHAIN
NLDNINENVSASNSRIKDVDFAKETTEMTKSQILQQASSSILAQAKQAPNAALGLLR
>Mature_376_residues
SITVNTNVSAMTAQRYLNNATDGVNQSMERLSSGFKINSAKDDAAGLQISNRLTSQSRGLDVAVRNANDGISIAQTAEGA
MNESTNILQRMRDLSLQSANGSNTTSDREAIQQEVGALNDELNRIAETTSFGGSRLLNGQFGTKSFQIGADSGEAVMLSL
NNMRSDSASMGGTSYKAETALGGDWAVNAEKSELTVSYVNRAGEEKELTINAKSGDDIEQVATYINGQTDAINASVSENG
ELQIVTSNDKVQGEVKFGGSLAGELNMGAAQAETVKSIDVTTVGGSQKAVAILDAAMQFVDSNRADLGAFQNRFSHAINN
LDNINENVSASNSRIKDVDFAKETTEMTKSQILQQASSSILAQAKQAPNAALGLLR

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. FlaA is not essential for polar flagellar synthesis and swimming motility. Homopolymer of flaA is able to form a functional filament [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=177, Percent_Identity=42.3728813559322, Blast_Score=136, Evalue=2e-33,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029
- InterPro:   IPR010810 [H]

Pfam domain/function: PF00700 Flagellin_C; PF07196 Flagellin_IN; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 39800; Mature: 39669

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSITVNTNVSAMTAQRYLNNATDGVNQSMERLSSGFKINSAKDDAAGLQISNRLTSQSRG
CEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHCCCEECCCCCCCCCCCHHHHHHHHCCC
LDVAVRNANDGISIAQTAEGAMNESTNILQRMRDLSLQSANGSNTTSDREAIQQEVGALN
CEEEEECCCCCCEEHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
DELNRIAETTSFGGSRLLNGQFGTKSFQIGADSGEAVMLSLNNMRSDSASMGGTSYKAET
HHHHHHHHHHCCCCCEEECCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCC
ALGGDWAVNAEKSELTVSYVNRAGEEKELTINAKSGDDIEQVATYINGQTDAINASVSEN
CCCCCEEECCCCHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHCCCCCEEECCCCCC
GELQIVTSNDKVQGEVKFGGSLAGELNMGAAQAETVKSIDVTTVGGSQKAVAILDAAMQF
CCEEEEECCCCEEEEEEECCEECCCCCCCCHHHHHHHEEEEEEECCCCHHHHHHHHHHHH
VDSNRADLGAFQNRFSHAINNLDNINENVSASNSRIKDVDFAKETTEMTKSQILQQASSS
HHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ILAQAKQAPNAALGLLR
HHHHHHHCCCHHHCCCC
>Mature Secondary Structure 
SITVNTNVSAMTAQRYLNNATDGVNQSMERLSSGFKINSAKDDAAGLQISNRLTSQSRG
EEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHCCCEECCCCCCCCCCCHHHHHHHHCCC
LDVAVRNANDGISIAQTAEGAMNESTNILQRMRDLSLQSANGSNTTSDREAIQQEVGALN
CEEEEECCCCCCEEHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
DELNRIAETTSFGGSRLLNGQFGTKSFQIGADSGEAVMLSLNNMRSDSASMGGTSYKAET
HHHHHHHHHHCCCCCEEECCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCC
ALGGDWAVNAEKSELTVSYVNRAGEEKELTINAKSGDDIEQVATYINGQTDAINASVSEN
CCCCCEEECCCCHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHCCCCCEEECCCCCC
GELQIVTSNDKVQGEVKFGGSLAGELNMGAAQAETVKSIDVTTVGGSQKAVAILDAAMQF
CCEEEEECCCCEEEEEEECCEECCCCCCCCHHHHHHHEEEEEEECCCCHHHHHHHHHHHH
VDSNRADLGAFQNRFSHAINNLDNINENVSASNSRIKDVDFAKETTEMTKSQILQQASSS
HHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ILAQAKQAPNAALGLLR
HHHHHHHCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7883718; 12620739 [H]